Literature DB >> 25822791

Defining fundamental steps in the assembly of the Drosophila RNAi enzyme complex.

Shintaro Iwasaki1, Hiroshi M Sasaki1, Yuriko Sakaguchi2, Tsutomu Suzuki2, Hisashi Tadakuma3, Yukihide Tomari4.   

Abstract

Small RNAs such as small interfering RNAs (siRNAs) and microRNAs (miRNAs) silence the expression of their complementary target messenger RNAs via the formation of effector RNA-induced silencing complexes (RISCs), which contain Argonaute (Ago) family proteins at their core. Although loading of siRNA duplexes into Drosophila Ago2 requires the Dicer-2-R2D2 heterodimer and the Hsc70/Hsp90 (Hsp90 also known as Hsp83) chaperone machinery, the details of RISC assembly remain unclear. Here we reconstitute RISC assembly using only Ago2, Dicer-2, R2D2, Hsc70, Hsp90, Hop, Droj2 (an Hsp40 homologue) and p23. By following the assembly of single RISC molecules, we find that, in the absence of the chaperone machinery, an siRNA bound to Dicer-2-R2D2 associates with Ago2 only transiently. The chaperone machinery extends the dwell time of the Dicer-2-R2D2-siRNA complex on Ago2, in a manner dependent on recognition of the 5'-phosphate on the siRNA guide strand. We propose that the chaperone machinery supports a productive state of Ago2, allowing it to load siRNA duplexes from Dicer-2-R2D2 and thereby assemble RISC.

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Year:  2015        PMID: 25822791     DOI: 10.1038/nature14254

Source DB:  PubMed          Journal:  Nature        ISSN: 0028-0836            Impact factor:   49.962


  42 in total

1.  In vitro assembly of plant RNA-induced silencing complexes facilitated by molecular chaperone HSP90.

Authors:  Taichiro Iki; Manabu Yoshikawa; Masaki Nishikiori; Mauren C Jaudal; Eiko Matsumoto-Yokoyama; Ichiro Mitsuhara; Tetsuo Meshi; Masayuki Ishikawa
Journal:  Mol Cell       Date:  2010-06-03       Impact factor: 17.970

Review 2.  Minireview: the intersection of steroid receptors with molecular chaperones: observations and questions.

Authors:  David F Smith; David O Toft
Journal:  Mol Endocrinol       Date:  2008-05-01

3.  Argonaute2 cleaves the anti-guide strand of siRNA during RISC activation.

Authors:  Tim A Rand; Sean Petersen; Fenghe Du; Xiaodong Wang
Journal:  Cell       Date:  2005-11-03       Impact factor: 41.582

4.  Folding of the glucocorticoid receptor by the reconstituted Hsp90-based chaperone machinery. The initial hsp90.p60.hsp70-dependent step is sufficient for creating the steroid binding conformation.

Authors:  K D Dittmar; W B Pratt
Journal:  J Biol Chem       Date:  1997-05-16       Impact factor: 5.157

5.  Recognition of the pre-miRNA structure by Drosophila Dicer-1.

Authors:  Akihisa Tsutsumi; Tomoko Kawamata; Natsuko Izumi; Hervé Seitz; Yukihide Tomari
Journal:  Nat Struct Mol Biol       Date:  2011-09-18       Impact factor: 15.369

6.  Roles for the Yb body components Armitage and Yb in primary piRNA biogenesis in Drosophila.

Authors:  Kuniaki Saito; Hirotsugu Ishizu; Miharu Komai; Hazuki Kotani; Yoshinori Kawamura; Kazumichi M Nishida; Haruhiko Siomi; Mikiko C Siomi
Journal:  Genes Dev       Date:  2010-10-21       Impact factor: 11.361

7.  A direct role for Hsp90 in pre-RISC formation in Drosophila.

Authors:  Tomohiro Miyoshi; Akiko Takeuchi; Haruhiko Siomi; Mikiko C Siomi
Journal:  Nat Struct Mol Biol       Date:  2010-07-18       Impact factor: 15.369

8.  Structural determinants of miRNAs for RISC loading and slicer-independent unwinding.

Authors:  Tomoko Kawamata; Hervé Seitz; Yukihide Tomari
Journal:  Nat Struct Mol Biol       Date:  2009-08-16       Impact factor: 15.369

9.  In vitro analysis of RNA interference in Drosophila melanogaster.

Authors:  Benjamin Haley; Guiliang Tang; Phillip D Zamore
Journal:  Methods       Date:  2003-08       Impact factor: 3.608

10.  Structure of yeast Argonaute with guide RNA.

Authors:  Kotaro Nakanishi; David E Weinberg; David P Bartel; Dinshaw J Patel
Journal:  Nature       Date:  2012-06-20       Impact factor: 49.962

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  53 in total

Review 1.  RNAi in Plants: An Argonaute-Centered View.

Authors:  Xiaofeng Fang; Yijun Qi
Journal:  Plant Cell       Date:  2016-02-11       Impact factor: 11.277

2.  Co-chaperone Hsp70/Hsp90-organizing protein (Hop) is required for transposon silencing and Piwi-interacting RNA (piRNA) biogenesis.

Authors:  Joseph A Karam; Rasesh Y Parikh; Dhananjaya Nayak; David Rosenkranz; Vamsi K Gangaraju
Journal:  J Biol Chem       Date:  2017-02-13       Impact factor: 5.157

3.  Multidomain Convergence of Argonaute during RISC Assembly Correlates with the Formation of Internal Water Clusters.

Authors:  Mi Seul Park; Raul Araya-Secchi; James A Brackbill; Hong-Duc Phan; Audrey C Kehling; Ekram W Abd El-Wahab; Daniel M Dayeh; Marcos Sotomayor; Kotaro Nakanishi
Journal:  Mol Cell       Date:  2019-07-16       Impact factor: 17.970

Review 4.  Innate and intrinsic antiviral immunity in Drosophila.

Authors:  Assel Mussabekova; Laurent Daeffler; Jean-Luc Imler
Journal:  Cell Mol Life Sci       Date:  2017-01-19       Impact factor: 9.261

Review 5.  Messages on small RNA duplexes in plants.

Authors:  Taichiro Iki
Journal:  J Plant Res       Date:  2016-11-23       Impact factor: 2.629

6.  A Suppressor Screen for AGO1 Degradation by the Viral F-Box P0 Protein Uncovers a Role for AGO DUF1785 in sRNA Duplex Unwinding.

Authors:  Benoît Derrien; Marion Clavel; Nicolas Baumberger; Taichiro Iki; Alexis Sarazin; Thibaut Hacquard; María Rosa Ponce; Véronique Ziegler-Graff; Hervé Vaucheret; José Luis Micol; Olivier Voinnet; Pascal Genschik
Journal:  Plant Cell       Date:  2018-05-30       Impact factor: 11.277

Review 7.  The HSP90 chaperone machinery.

Authors:  Florian H Schopf; Maximilian M Biebl; Johannes Buchner
Journal:  Nat Rev Mol Cell Biol       Date:  2017-04-21       Impact factor: 94.444

Review 8.  Structural Foundations of RNA Silencing by Argonaute.

Authors:  Jessica Sheu-Gruttadauria; Ian J MacRae
Journal:  J Mol Biol       Date:  2017-07-27       Impact factor: 5.469

9.  TRANSPORTIN1 Promotes the Association of MicroRNA with ARGONAUTE1 in Arabidopsis.

Authors:  Yuwei Cui; Xiaofeng Fang; Yijun Qi
Journal:  Plant Cell       Date:  2016-09-23       Impact factor: 11.277

10.  TAF11 Assembles the RISC Loading Complex to Enhance RNAi Efficiency.

Authors:  Chunyang Liang; Yibing Wang; Yukiko Murota; Xiang Liu; Dean Smith; Mikiko C Siomi; Qinghua Liu
Journal:  Mol Cell       Date:  2015-08-06       Impact factor: 17.970

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