Literature DB >> 20966047

Roles for the Yb body components Armitage and Yb in primary piRNA biogenesis in Drosophila.

Kuniaki Saito1, Hirotsugu Ishizu, Miharu Komai, Hazuki Kotani, Yoshinori Kawamura, Kazumichi M Nishida, Haruhiko Siomi, Mikiko C Siomi.   

Abstract

PIWI-interacting RNAs (piRNAs) protect genome integrity from transposons. In Drosophila ovarian somas, primary piRNAs are produced and loaded onto Piwi. Here, we describe roles for the cytoplasmic Yb body components Armitage and Yb in somatic primary piRNA biogenesis. Armitage binds to Piwi and is required for localizing Piwi into Yb bodies. Without Armitage or Yb, Piwi is freed from the piRNAs and does not enter the nucleus. Thus, piRNA loading is required for Piwi nuclear entry. We propose that a functional Piwi-piRNA complex is formed and inspected in Yb bodies before its nuclear entry to exert transposon silencing.

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Year:  2010        PMID: 20966047      PMCID: PMC2975925          DOI: 10.1101/gad.1989510

Source DB:  PubMed          Journal:  Genes Dev        ISSN: 0890-9369            Impact factor:   11.361


  29 in total

1.  The Drosophila SDE3 homolog armitage is required for oskar mRNA silencing and embryonic axis specification.

Authors:  Heather A Cook; Birgit S Koppetsch; Jing Wu; William E Theurkauf
Journal:  Cell       Date:  2004-03-19       Impact factor: 41.582

2.  Identification of novel argonaute-associated proteins.

Authors:  Gunter Meister; Markus Landthaler; Lasse Peters; Po Yu Chen; Henning Urlaub; Reinhard Lührmann; Thomas Tuschl
Journal:  Curr Biol       Date:  2005-11-10       Impact factor: 10.834

3.  A distinct small RNA pathway silences selfish genetic elements in the germline.

Authors:  Vasily V Vagin; Alla Sigova; Chengjian Li; Hervé Seitz; Vladimir Gvozdev; Phillip D Zamore
Journal:  Science       Date:  2006-06-29       Impact factor: 47.728

4.  Yb modulates the divisions of both germline and somatic stem cells through piwi- and hh-mediated mechanisms in the Drosophila ovary.

Authors:  F J King; A Szakmary; D N Cox; H Lin
Journal:  Mol Cell       Date:  2001-03       Impact factor: 17.970

5.  The large Maf factor Traffic Jam controls gonad morphogenesis in Drosophila.

Authors:  Michelle A Li; Jeffrey D Alls; Rita M Avancini; Karen Koo; Dorothea Godt
Journal:  Nat Cell Biol       Date:  2003-10-26       Impact factor: 28.824

6.  A regulatory circuit for piwi by the large Maf gene traffic jam in Drosophila.

Authors:  Kuniaki Saito; Sachi Inagaki; Toutai Mituyama; Yoshinori Kawamura; Yukiteru Ono; Eri Sakota; Hazuki Kotani; Kiyoshi Asai; Haruhiko Siomi; Mikiko C Siomi
Journal:  Nature       Date:  2009-10-07       Impact factor: 49.962

7.  RISC assembly defects in the Drosophila RNAi mutant armitage.

Authors:  Yukihide Tomari; Tingting Du; Benjamin Haley; Dianne S Schwarz; Ryan Bennett; Heather A Cook; Birgit S Koppetsch; William E Theurkauf; Phillip D Zamore
Journal:  Cell       Date:  2004-03-19       Impact factor: 41.582

8.  piwi encodes a nucleoplasmic factor whose activity modulates the number and division rate of germline stem cells.

Authors:  D N Cox; A Chao; H Lin
Journal:  Development       Date:  2000-02       Impact factor: 6.868

9.  Aubergine encodes a Drosophila polar granule component required for pole cell formation and related to eIF2C.

Authors:  A N Harris; P M Macdonald
Journal:  Development       Date:  2001-07       Impact factor: 6.868

10.  Somatic signaling mediated by fs(1)Yb is essential for germline stem cell maintenance during Drosophila oogenesis.

Authors:  F J King; H Lin
Journal:  Development       Date:  1999-05       Impact factor: 6.868

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  147 in total

1.  Drosophila Piwi functions downstream of piRNA production mediating a chromatin-based transposon silencing mechanism in female germ line.

Authors:  Sidney H Wang; Sarah C R Elgin
Journal:  Proc Natl Acad Sci U S A       Date:  2011-12-12       Impact factor: 11.205

2.  shutdown is a component of the Drosophila piRNA biogenesis machinery.

Authors:  Jonathan B Preall; Benjamin Czech; Paloma M Guzzardo; Felix Muerdter; Gregory J Hannon
Journal:  RNA       Date:  2012-07-02       Impact factor: 4.942

3.  Selective amplification and sequencing of cyclic phosphate-containing RNAs by the cP-RNA-seq method.

Authors:  Shozo Honda; Keisuke Morichika; Yohei Kirino
Journal:  Nat Protoc       Date:  2016-02-11       Impact factor: 13.491

Review 4.  Roles for the lipid-signaling enzyme MitoPLD in mitochondrial dynamics, piRNA biogenesis, and spermatogenesis.

Authors:  Qun Gao; Michael A Frohman
Journal:  BMB Rep       Date:  2012-01       Impact factor: 4.778

5.  Separation of stem cell maintenance and transposon silencing functions of Piwi protein.

Authors:  Mikhail S Klenov; Olesya A Sokolova; Evgeny Y Yakushev; Anastasia D Stolyarenko; Elena A Mikhaleva; Sergey A Lavrov; Vladimir A Gvozdev
Journal:  Proc Natl Acad Sci U S A       Date:  2011-11-07       Impact factor: 11.205

Review 6.  New perspectives on the diversification of the RNA interference system: insights from comparative genomics and small RNA sequencing.

Authors:  Alexander Maxwell Burroughs; Yoshinari Ando; L Aravind
Journal:  Wiley Interdiscip Rev RNA       Date:  2013-12-05       Impact factor: 9.957

Review 7.  PIWI-interacting RNAs: from generation to transgenerational epigenetics.

Authors:  Maartje J Luteijn; René F Ketting
Journal:  Nat Rev Genet       Date:  2013-06-25       Impact factor: 53.242

8.  Identification and Functional Analysis of the Pre-piRNA 3' Trimmer in Silkworms.

Authors:  Natsuko Izumi; Keisuke Shoji; Yuriko Sakaguchi; Shozo Honda; Yohei Kirino; Tsutomu Suzuki; Susumu Katsuma; Yukihide Tomari
Journal:  Cell       Date:  2016-02-25       Impact factor: 41.582

9.  Nuclear RNA export factor variant initiates piRNA-guided co-transcriptional silencing.

Authors:  Kensaku Murano; Yuka W Iwasaki; Hirotsugu Ishizu; Akane Mashiko; Aoi Shibuya; Shu Kondo; Shungo Adachi; Saori Suzuki; Kuniaki Saito; Tohru Natsume; Mikiko C Siomi; Haruhiko Siomi
Journal:  EMBO J       Date:  2019-08-01       Impact factor: 11.598

10.  Structure and function of Zucchini endoribonuclease in piRNA biogenesis.

Authors:  Hiroshi Nishimasu; Hirotsugu Ishizu; Kuniaki Saito; Satoshi Fukuhara; Miharu K Kamatani; Luc Bonnefond; Naoki Matsumoto; Tomohiro Nishizawa; Keita Nakanaga; Junken Aoki; Ryuichiro Ishitani; Haruhiko Siomi; Mikiko C Siomi; Osamu Nureki
Journal:  Nature       Date:  2012-10-14       Impact factor: 49.962

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