Literature DB >> 25404997

A VECTOR MOMENTA FORMULATION OF DIFFEOMORPHISMS FOR IMPROVED GEODESIC REGRESSION AND ATLAS CONSTRUCTION.

Nikhil Singh1, Jacob Hinkle1, Sarang Joshi1, P Thomas Fletcher1.   

Abstract

This paper presents a novel approach for diffeomorphic image regression and atlas estimation that results in improved convergence and numerical stability. We use a vector momenta representation of a diffeomorphism's initial conditions instead of the standard scalar momentum that is typically used. The corresponding variational problem results in a closed-form update for template estimation in both the geodesic regression and atlas estimation problems. While we show that the theoretical optimal solution is equivalent to the scalar momenta case, the simplification of the optimization problem leads to more stable and efficient estimation in practice. We demonstrate the effectiveness of our method for atlas estimation and geodesic regression using synthetically generated shapes and 3D MRI brain scans.

Entities:  

Keywords:  Atlas; Geodesic regression; LDDMM; Vector Momentum

Year:  2013        PMID: 25404997      PMCID: PMC4232950          DOI: 10.1109/ISBI.2013.6556700

Source DB:  PubMed          Journal:  Proc IEEE Int Symp Biomed Imaging        ISSN: 1945-7928


  5 in total

1.  Geodesic regression for image time-series.

Authors:  Marc Niethammer; Yang Huang; François-Xavier Vialard
Journal:  Med Image Comput Comput Assist Interv       Date:  2011

2.  Geodesic Shooting for Computational Anatomy.

Authors:  Michael I Miller; Alain Trouvé; Laurent Younes
Journal:  J Math Imaging Vis       Date:  2006-01-31       Impact factor: 1.627

3.  Evolutions equations in computational anatomy.

Authors:  Laurent Younes; Felipe Arrate; Michael I Miller
Journal:  Neuroimage       Date:  2008-11-12       Impact factor: 6.556

4.  Unbiased diffeomorphic atlas construction for computational anatomy.

Authors:  S Joshi; Brad Davis; Matthieu Jomier; Guido Gerig
Journal:  Neuroimage       Date:  2004       Impact factor: 6.556

5.  Genetic, structural and functional imaging biomarkers for early detection of conversion from MCI to AD.

Authors:  Nikhil Singh; Angela Y Wang; Preethi Sankaranarayanan; P Thomas Fletcher; Sarang Joshi
Journal:  Med Image Comput Comput Assist Interv       Date:  2012
  5 in total
  18 in total

1.  Quicksilver: Fast predictive image registration - A deep learning approach.

Authors:  Xiao Yang; Roland Kwitt; Martin Styner; Marc Niethammer
Journal:  Neuroimage       Date:  2017-07-11       Impact factor: 6.556

2.  Geodesic image regression with a sparse parameterization of diffeomorphisms.

Authors:  James Fishbaugh; Marcel Prastawa; Guido Gerig; Stanley Durrleman
Journal:  Geom Sci Inf (2013)       Date:  2013

3.  Efficient Parallel Transport in the Group of Diffeomorphisms via Reduction to the Lie Algebra.

Authors:  Kristen M Campbell; P Thomas Fletcher
Journal:  Graphs Biomed Image Anal Comput Anat Imaging Genet (2017)       Date:  2017-09-08

4.  THE IMPACT OF MATCHING FUNCTIONAL ON ATROPHY MEASUREMENT FROM GEODESIC SHOOTING IN DIFFEOMORPHISMS.

Authors:  Greg M Fleishman; Paul M Thompson
Journal:  Proc IEEE Int Symp Biomed Imaging       Date:  2017-06-19

5.  Nonparametric Aggregation of Geodesic Trends for Longitudinal Data Analysis.

Authors:  Kristen M Campbell; P Thomas Fletcher
Journal:  Shape Med Imaging (2018)       Date:  2018-11-23

6.  ADAPTIVE GRADIENT DESCENT OPTIMIZATION OF INITIAL MOMENTA FOR GEODESIC SHOOTING IN DIFFEOMORPHISMS.

Authors:  Greg M Fleishman; Paul M Thompson
Journal:  Proc IEEE Int Symp Biomed Imaging       Date:  2017-06-19

7.  GEODESIC REGRESSION OF IMAGE AND SHAPE DATA FOR IMPROVED MODELING OF 4D TRAJECTORIES.

Authors:  James Fishbaugh; Marcel Prastawa; Guido Gerig; Stanley Durrleman
Journal:  Proc IEEE Int Symp Biomed Imaging       Date:  2014-04

8.  Splines for diffeomorphic image regression.

Authors:  Nikhil Singh; Marc Niethammer
Journal:  Med Image Comput Comput Assist Interv       Date:  2014

9.  Predicting infant cortical surface development using a 4D varifold-based learning framework and local topography-based shape morphing.

Authors:  Islem Rekik; Gang Li; Weili Lin; Dinggang Shen
Journal:  Med Image Anal       Date:  2015-11-10       Impact factor: 8.545

10.  Prediction of Longitudinal Development of Infant Cortical Surface Shape Using a 4D Current-Based Learning Framework.

Authors:  Islem Rekik; Gang Li; Weili Lin; Dinggang Shen
Journal:  Inf Process Med Imaging       Date:  2015
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