Literature DB >> 23956495

Toward a comprehensive framework for the spatiotemporal statistical analysis of longitudinal shape data.

S Durrleman1, X Pennec, A Trouvé, J Braga, G Gerig, N Ayache.   

Abstract

This paper proposes an original approach for the statistical analysis of longitudinal shape data. The proposed method allows the characterization of typical growth patterns and subject-specific shape changes in repeated time-series observations of several subjects. This can be seen as the extension of usual longitudinal statistics of scalar measurements to high-dimensional shape or image data. The method is based on the estimation of continuous subject-specific growth trajectories and the comparison of such temporal shape changes across subjects. Differences between growth trajectories are decomposed into morphological deformations, which account for shape changes independent of the time, and time warps, which account for different rates of shape changes over time. Given a longitudinal shape data set, we estimate a mean growth scenario representative of the population, and the variations of this scenario both in terms of shape changes and in terms of change in growth speed. Then, intrinsic statistics are derived in the space of spatiotemporal deformations, which characterize the typical variations in shape and in growth speed within the studied population. They can be used to detect systematic developmental delays across subjects. In the context of neuroscience, we apply this method to analyze the differences in the growth of the hippocampus in children diagnosed with autism, developmental delays and in controls. Result suggest that group differences may be better characterized by a different speed of maturation rather than shape differences at a given age. In the context of anthropology, we assess the differences in the typical growth of the endocranium between chimpanzees and bonobos. We take advantage of this study to show the robustness of the method with respect to change of parameters and perturbation of the age estimates.

Entities:  

Keywords:  growth; longitudinal data; shape regression; spatiotemporal registration; statistics; time warp

Year:  2013        PMID: 23956495      PMCID: PMC3744347          DOI: 10.1007/s11263-012-0592-x

Source DB:  PubMed          Journal:  Int J Comput Vis        ISSN: 0920-5691            Impact factor:   7.410


  24 in total

1.  Construction of a statistical model for cardiac motion analysis using nonrigid image registration.

Authors:  Raghavendra Chandrashekara; Anil Rao; Gerardo Ivar Sanchez-Ortiz; Raad H Mohiaddin; Daniel Rueckert
Journal:  Inf Process Med Imaging       Date:  2003-07

2.  Estimation of smooth growth trajectories with controlled acceleration from time series shape data.

Authors:  James Fishbaugh; Stanley Durrleman; Guido Gerig
Journal:  Med Image Comput Comput Assist Interv       Date:  2011

3.  Registration, atlas estimation and variability analysis of white matter fiber bundles modeled as currents.

Authors:  Stanley Durrleman; Pierre Fillard; Xavier Pennec; Alain Trouvé; Nicholas Ayache
Journal:  Neuroimage       Date:  2010-11-29       Impact factor: 6.556

4.  Spatio-temporal free-form registration of cardiac MR image sequences.

Authors:  Dimitrios Perperidis; Raad H Mohiaddin; Daniel Rueckert
Journal:  Med Image Anal       Date:  2005-10       Impact factor: 8.545

5.  A pattern-theoretic characterization of biological growth.

Authors:  Ulf Grenander; Anuj Srivastava; Sanjay Saini
Journal:  IEEE Trans Med Imaging       Date:  2007-05       Impact factor: 10.048

6.  User-guided 3D active contour segmentation of anatomical structures: significantly improved efficiency and reliability.

Authors:  Paul A Yushkevich; Joseph Piven; Heather Cody Hazlett; Rachel Gimpel Smith; Sean Ho; James C Gee; Guido Gerig
Journal:  Neuroimage       Date:  2006-03-20       Impact factor: 6.556

7.  Time sequence diffeomorphic metric mapping and parallel transport track time-dependent shape changes.

Authors:  Anqi Qiu; Marilyn Albert; Laurent Younes; Michael I Miller
Journal:  Neuroimage       Date:  2008-11-07       Impact factor: 6.556

8.  A Robust Algorithm for Point Set Registration Using Mixture of Gaussians.

Authors:  Bing Jian; Baba C Vemuri
Journal:  Proc IEEE Int Conf Comput Vis       Date:  2005-10

Review 9.  Bonobo sex and society.

Authors:  F B de Waal
Journal:  Sci Am       Date:  1995-03       Impact factor: 2.142

10.  Magnetic resonance imaging and head circumference study of brain size in autism: birth through age 2 years.

Authors:  Heather Cody Hazlett; Michele Poe; Guido Gerig; Rachel Gimpel Smith; James Provenzale; Allison Ross; John Gilmore; Joseph Piven
Journal:  Arch Gen Psychiatry       Date:  2005-12
View more
  34 in total

1.  Geodesic shape regression in the framework of currents.

Authors:  James Fishbaugh; Marcel Prastawa; Guido Gerig; Stanley Durrleman
Journal:  Inf Process Med Imaging       Date:  2013

2.  Geodesic image regression with a sparse parameterization of diffeomorphisms.

Authors:  James Fishbaugh; Marcel Prastawa; Guido Gerig; Stanley Durrleman
Journal:  Geom Sci Inf (2013)       Date:  2013

3.  Temporally diffeomorphic cardiac motion estimation from three-dimensional echocardiography by minimization of intensity consistency error.

Authors:  Zhijun Zhang; Muhammad Ashraf; David J Sahn; Xubo Song
Journal:  Med Phys       Date:  2014-05       Impact factor: 4.071

4.  Bayesian Covariate Selection in Mixed-Effects Models For Longitudinal Shape Analysis.

Authors:  Prasanna Muralidharan; James Fishbaugh; Eun Young Kim; Hans J Johnson; Jane S Paulsen; Guido Gerig; P Thomas Fletcher
Journal:  Proc IEEE Int Symp Biomed Imaging       Date:  2016-06-16

5.  Hierarchical geodesic modeling on the diffusion orientation distribution function for longitudinal DW-MRI analysis.

Authors:  Heejong Kim; Sungmin Hong; Martin Styner; Joseph Piven; Kelly Botteron; Guido Gerig
Journal:  Med Image Comput Comput Assist Interv       Date:  2020-09-29

6.  Riemannian Nonlinear Mixed Effects Models: Analyzing Longitudinal Deformations in Neuroimaging.

Authors:  Hyunwoo J Kim; Nagesh Adluru; Heemanshu Suri; Baba C Vemuri; Sterling C Johnson; Vikas Singh
Journal:  Proc IEEE Comput Soc Conf Comput Vis Pattern Recognit       Date:  2017-11-09

7.  Nonparametric Aggregation of Geodesic Trends for Longitudinal Data Analysis.

Authors:  Kristen M Campbell; P Thomas Fletcher
Journal:  Shape Med Imaging (2018)       Date:  2018-11-23

8.  Predictive Modeling of Anatomy with Genetic and Clinical Data.

Authors:  Adrian V Dalca; Ramesh Sridharan; Mert R Sabuncu; Polina Golland
Journal:  Med Image Comput Comput Assist Interv       Date:  2015-11-18

9.  4D CONTINUOUS MEDIAL REPRESENTATION BY GEODESIC SHAPE REGRESSION.

Authors:  Sungmin Hong; James Fishbaugh; Guido Gerig
Journal:  Proc IEEE Int Symp Biomed Imaging       Date:  2018-05-24

10.  Time-warped geodesic regression.

Authors:  Yi Hong; Nikhil Singh; Roland Kwitt; Marc Niethammer
Journal:  Med Image Comput Comput Assist Interv       Date:  2014
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.