Literature DB >> 25404324

Evolutionary cell biology: two origins, one objective.

Michael Lynch1, Mark C Field2, Holly V Goodson3, Harmit S Malik4, José B Pereira-Leal5, David S Roos6, Aaron P Turkewitz7, Shelley Sazer8.   

Abstract

All aspects of biological diversification ultimately trace to evolutionary modifications at the cellular level. This central role of cells frames the basic questions as to how cells work and how cells come to be the way they are. Although these two lines of inquiry lie respectively within the traditional provenance of cell biology and evolutionary biology, a comprehensive synthesis of evolutionary and cell-biological thinking is lacking. We define evolutionary cell biology as the fusion of these two eponymous fields with the theoretical and quantitative branches of biochemistry, biophysics, and population genetics. The key goals are to develop a mechanistic understanding of general evolutionary processes, while specifically infusing cell biology with an evolutionary perspective. The full development of this interdisciplinary field has the potential to solve numerous problems in diverse areas of biology, including the degree to which selection, effectively neutral processes, historical contingencies, and/or constraints at the chemical and biophysical levels dictate patterns of variation for intracellular features. These problems can now be examined at both the within- and among-species levels, with single-cell methodologies even allowing quantification of variation within genotypes. Some results from this emerging field have already had a substantial impact on cell biology, and future findings will significantly influence applications in agriculture, medicine, environmental science, and synthetic biology.

Keywords:  adaptive evolution; cell biology; cellular evolution; evolutionary cell biology; random genetic drift

Mesh:

Year:  2014        PMID: 25404324      PMCID: PMC4260604          DOI: 10.1073/pnas.1415861111

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  62 in total

1.  On the possibility of constructive neutral evolution.

Authors:  A Stoltzfus
Journal:  J Mol Evol       Date:  1999-08       Impact factor: 2.395

2.  Intrinsic noise in gene regulatory networks.

Authors:  M Thattai; A van Oudenaarden
Journal:  Proc Natl Acad Sci U S A       Date:  2001-07-03       Impact factor: 11.205

Review 3.  Preservation of duplicate genes by complementary, degenerative mutations.

Authors:  A Force; M Lynch; F B Pickett; A Amores; Y L Yan; J Postlethwait
Journal:  Genetics       Date:  1999-04       Impact factor: 4.562

4.  The origin of subfunctions and modular gene regulation.

Authors:  Allan Force; William A Cresko; F Bryan Pickett; Steven R Proulx; Chris Amemiya; Michael Lynch
Journal:  Genetics       Date:  2005-03-21       Impact factor: 4.562

5.  Conservation and evolvability in regulatory networks: the evolution of ribosomal regulation in yeast.

Authors:  Amos Tanay; Aviv Regev; Ron Shamir
Journal:  Proc Natl Acad Sci U S A       Date:  2005-05-09       Impact factor: 11.205

Review 6.  How a neutral evolutionary ratchet can build cellular complexity.

Authors:  Julius Lukeš; John M Archibald; Patrick J Keeling; W Ford Doolittle; Michael W Gray
Journal:  IUBMB Life       Date:  2011-07       Impact factor: 3.885

7.  The spandrels of San Marco and the Panglossian paradigm: a critique of the adaptationist programme.

Authors:  S J Gould; R C Lewontin
Journal:  Proc R Soc Lond B Biol Sci       Date:  1979-09-21

Review 8.  Evolution: Tracing the origins of centrioles, cilia, and flagella.

Authors:  Zita Carvalho-Santos; Juliette Azimzadeh; José B Pereira-Leal; Mónica Bettencourt-Dias
Journal:  J Cell Biol       Date:  2011-07-25       Impact factor: 10.539

Review 9.  Nuclear volume control by nucleoskeletal DNA, selection for cell volume and cell growth rate, and the solution of the DNA C-value paradox.

Authors:  T Cavalier-Smith
Journal:  J Cell Sci       Date:  1978-12       Impact factor: 5.285

10.  Components of coated vesicles and nuclear pore complexes share a common molecular architecture.

Authors:  Damien Devos; Svetlana Dokudovskaya; Frank Alber; Rosemary Williams; Brian T Chait; Andrej Sali; Michael P Rout
Journal:  PLoS Biol       Date:  2004-11-02       Impact factor: 8.029

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  40 in total

Review 1.  Tetrahymena as a Unicellular Model Eukaryote: Genetic and Genomic Tools.

Authors:  Marisa D Ruehle; Eduardo Orias; Chad G Pearson
Journal:  Genetics       Date:  2016-06       Impact factor: 4.562

Review 2.  It's more than stamp collecting: how genome sequencing can unify biological research.

Authors:  Stephen Richards
Journal:  Trends Genet       Date:  2015-05-20       Impact factor: 11.639

3.  Endosymbiosis and its implications for evolutionary theory.

Authors:  Maureen A O'Malley
Journal:  Proc Natl Acad Sci U S A       Date:  2015-04-16       Impact factor: 11.205

4.  The evolution of bacterial cell size: the internal diffusion-constraint hypothesis.

Authors:  Romain Gallet; Cyrille Violle; Nathalie Fromin; Roula Jabbour-Zahab; Brian J Enquist; Thomas Lenormand
Journal:  ISME J       Date:  2017-04-04       Impact factor: 10.302

Review 5.  Evolutionary mysteries in meiosis.

Authors:  Thomas Lenormand; Jan Engelstädter; Susan E Johnston; Erik Wijnker; Christoph R Haag
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2016-10-19       Impact factor: 6.237

Review 6.  Evolutionary Repair Experiments as a Window to the Molecular Diversity of Life.

Authors:  Thomas LaBar; Yu-Ying Phoebe Hsieh; Marco Fumasoni; Andrew W Murray
Journal:  Curr Biol       Date:  2020-05-18       Impact factor: 10.834

7.  Cell biology: scaling and the emergence of evolutionary cell biology.

Authors:  Patrick C Phillips; Bruce Bowerman
Journal:  Curr Biol       Date:  2015-03-16       Impact factor: 10.834

Review 8.  ChIP-ping the branches of the tree: functional genomics and the evolution of eukaryotic gene regulation.

Authors:  Georgi K Marinov; Anshul Kundaje
Journal:  Brief Funct Genomics       Date:  2018-03-01       Impact factor: 4.241

Review 9.  An evolutionary balance: conservation vs innovation in ciliate membrane trafficking.

Authors:  Sabrice Guerrier; Helmut Plattner; Elisabeth Richardson; Joel B Dacks; Aaron P Turkewitz
Journal:  Traffic       Date:  2016-10-27       Impact factor: 6.215

10.  Emerging Frontiers in the Study of Molecular Evolution.

Authors:  David A Liberles; Belinda Chang; Kerry Geiler-Samerotte; Aaron Goldman; Jody Hey; Betül Kaçar; Michelle Meyer; William Murphy; David Posada; Andrew Storfer
Journal:  J Mol Evol       Date:  2020-04       Impact factor: 2.395

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