Literature DB >> 25240485

Ultrasensitivity part I: Michaelian responses and zero-order ultrasensitivity.

James E Ferrell1, Sang Hoon Ha2.   

Abstract

Quantitative studies of signal transduction systems have shown that ultrasensitive responses - switch-like, sigmoidal input/output relationships - are commonplace in cell signaling. Ultrasensitivity is important for various complex signaling systems, including signaling cascades, bistable switches, and oscillators. In this first installment of a series on ultrasensitivity we survey the occurrence of ultrasensitive responses in signaling systems. We review why the simplest mass action systems exhibit Michaelian responses, and then move on to zero-order ultrasensitivity, a phenomenon that occurs when signaling proteins are operating near saturation. We also discuss the physiological relevance of zero-order ultrasensitivity to cellular regulation.
Copyright © 2014 Elsevier Ltd. All rights reserved.

Entities:  

Mesh:

Substances:

Year:  2014        PMID: 25240485      PMCID: PMC4214216          DOI: 10.1016/j.tibs.2014.08.003

Source DB:  PubMed          Journal:  Trends Biochem Sci        ISSN: 0968-0004            Impact factor:   13.807


  37 in total

1.  Bistability in cell signaling: How to make continuous processes discontinuous, and reversible processes irreversible.

Authors:  James E. Ferrell; Wen Xiong
Journal:  Chaos       Date:  2001-03       Impact factor: 3.642

2.  AMP-activated protein kinase: an ultrasensitive system for monitoring cellular energy charge.

Authors:  D G Hardie; I P Salt; S A Hawley; S P Davies
Journal:  Biochem J       Date:  1999-03-15       Impact factor: 3.857

3.  Kinetic models of phosphorylation cycles: a systematic approach using the rapid-equilibrium approximation for protein-protein interactions.

Authors:  Carlos Salazar; Thomas Höfer
Journal:  Biosystems       Date:  2005-10-17       Impact factor: 1.973

4.  Substrate competition as a source of ultrasensitivity in the inactivation of Wee1.

Authors:  Sun Young Kim; James E Ferrell
Journal:  Cell       Date:  2007-03-23       Impact factor: 41.582

Review 5.  Competition effects shape the response sensitivity and kinetics of phosphorylation cycles in cell signaling.

Authors:  Carlos Salazar; Thomas Höfer
Journal:  Ann N Y Acad Sci       Date:  2006-12       Impact factor: 5.691

6.  An amplified sensitivity arising from covalent modification in biological systems.

Authors:  A Goldbeter; D E Koshland
Journal:  Proc Natl Acad Sci U S A       Date:  1981-11       Impact factor: 11.205

7.  A model for a bistable biochemical trigger of mitosis.

Authors:  C D Thron
Journal:  Biophys Chem       Date:  1996-01       Impact factor: 2.352

8.  Highly cooperative opening of calcium channels by inositol 1,4,5-trisphosphate.

Authors:  T Meyer; D Holowka; L Stryer
Journal:  Science       Date:  1988-04-29       Impact factor: 47.728

9.  Adaptation at the output of the chemotaxis signalling pathway.

Authors:  Junhua Yuan; Richard W Branch; Basarab G Hosu; Howard C Berg
Journal:  Nature       Date:  2012-04-11       Impact factor: 49.962

10.  Cis-interactions between Notch and Delta generate mutually exclusive signalling states.

Authors:  David Sprinzak; Amit Lakhanpal; Lauren Lebon; Leah A Santat; Michelle E Fontes; Graham A Anderson; Jordi Garcia-Ojalvo; Michael B Elowitz
Journal:  Nature       Date:  2010-04-25       Impact factor: 49.962

View more
  63 in total

Review 1.  The role of T cell receptor signaling thresholds in guiding T cell fate decisions.

Authors:  Julie Zikherman; Byron Au-Yeung
Journal:  Curr Opin Immunol       Date:  2015-02-06       Impact factor: 7.486

Review 2.  Illuminating the Cell's Biochemical Activity Architecture.

Authors:  Sohum Mehta; Jin Zhang
Journal:  Biochemistry       Date:  2017-08-01       Impact factor: 3.162

3.  Mechanism and ultrasensitivity in Hedgehog signaling revealed by Patched1 disease mutations.

Authors:  Kostadin Petrov; Taciani de Almeida Magalhaes; Adrian Salic
Journal:  Proc Natl Acad Sci U S A       Date:  2021-02-09       Impact factor: 11.205

Review 4.  Fate-Regulating Circuits in Viruses: From Discovery to New Therapy Targets.

Authors:  Anand Pai; Leor S Weinberger
Journal:  Annu Rev Virol       Date:  2017-08-11       Impact factor: 10.431

5.  Transient Thresholding: A Mechanism Enabling Noncooperative Transcriptional Circuitry to Form a Switch.

Authors:  Katherine H Aull; Elizabeth J Tanner; Matthew Thomson; Leor S Weinberger
Journal:  Biophys J       Date:  2017-06-06       Impact factor: 4.033

6.  Optimizing enzymatic catalysts for rapid turnover of substrates with low enzyme sequestration.

Authors:  Abhishek Deshpande; Thomas E Ouldridge
Journal:  Biol Cybern       Date:  2020-10-12       Impact factor: 2.086

7.  NF-κB Dynamics Discriminate between TNF Doses in Single Cells.

Authors:  Qiuhong Zhang; Sanjana Gupta; David L Schipper; Gabriel J Kowalczyk; Allison E Mancini; James R Faeder; Robin E C Lee
Journal:  Cell Syst       Date:  2017-11-08       Impact factor: 10.304

Review 8.  Self-organization across scales: from molecules to organisms.

Authors:  Tanumoy Saha; Milos Galic
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2018-05-26       Impact factor: 6.237

9.  Dynamical predictors of an imminent phenotypic switch in bacteria.

Authors:  Huijing Wang; J Christian J Ray
Journal:  Phys Biol       Date:  2017-06-29       Impact factor: 2.583

Review 10.  Using Nature's "Tricks" To Rationally Tune the Binding Properties of Biomolecular Receptors.

Authors:  Francesco Ricci; Alexis Vallée-Bélisle; Anna J Simon; Alessandro Porchetta; Kevin W Plaxco
Journal:  Acc Chem Res       Date:  2016-08-26       Impact factor: 22.384

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.