Literature DB >> 25137718

High-resolution mesoscopic fluorescence molecular tomography based on compressive sensing.

Fugang Yang, Mehmet S Ozturk, Lingling Zhao, Wenxiang Cong, Ge Wang, Xavier Intes.   

Abstract

Mesoscopic fluorescence molecular tomography (MFMT) is new imaging modality aiming at 3-D imaging of molecular probes in a few millimeter thick biological samples with high-spatial resolution. In this paper, we develop a compressive sensing-based reconstruction method with l1-norm regularization for MFMT with the goal of improving spatial resolution and stability of the optical inverse problem. Three-dimensional numerical simulations of anatomically accurate microvasculature and real data obtained from phantom experiments are employed to evaluate the merits of the proposed method. Experimental results show that the proposed method can achieve 80 μm spatial resolution for a biological sample of 3 mm thickness and more accurate quantifications of concentrations and locations for the fluorophore distribution than those of the conventional methods.

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Year:  2014        PMID: 25137718      PMCID: PMC5286913          DOI: 10.1109/TBME.2014.2347284

Source DB:  PubMed          Journal:  IEEE Trans Biomed Eng        ISSN: 0018-9294            Impact factor:   4.538


  17 in total

1.  Evaluation of L1 and L2 minimum norm performances on EEG localizations.

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2.  Comparison of Monte Carlo methods for fluorescence molecular tomography-computational efficiency.

Authors:  Jin Chen; Xavier Intes
Journal:  Med Phys       Date:  2011-10       Impact factor: 4.071

3.  The integration of 3-D cell printing and mesoscopic fluorescence molecular tomography of vascular constructs within thick hydrogel scaffolds.

Authors:  Lingling Zhao; Vivian K Lee; Seung-Schik Yoo; Guohao Dai; Xavier Intes
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4.  Sparse MRI: The application of compressed sensing for rapid MR imaging.

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Authors:  Shuai Yuan; Qian Li; James Jiang; Alex Cable; Yu Chen
Journal:  Opt Lett       Date:  2009-06-01       Impact factor: 3.776

6.  A system for high-resolution depth-resolved optical imaging of fluorescence and absorption contrast.

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Journal:  Rev Sci Instrum       Date:  2009-04       Impact factor: 1.523

7.  Parallel computing with graphics processing units for high-speed Monte Carlo simulation of photon migration.

Authors:  Erik Alerstam; Tomas Svensson; Stefan Andersson-Engels
Journal:  J Biomed Opt       Date:  2008 Nov-Dec       Impact factor: 3.170

8.  Mesh-based Monte Carlo method in time-domain widefield fluorescence molecular tomography.

Authors:  Jin Chen; Qianqian Fang; Xavier Intes
Journal:  J Biomed Opt       Date:  2012-10       Impact factor: 3.170

9.  Time-gated perturbation Monte Carlo for whole body functional imaging in small animals.

Authors:  Jin Chen; Xavier Intes
Journal:  Opt Express       Date:  2009-10-26       Impact factor: 3.894

Review 10.  Mesoscopic fluorescence tomography of a photosensitizer (HPPH) 3D biodistribution in skin cancer.

Authors:  Mehmet S Ozturk; Daniel Rohrbach; Ulas Sunar; Xavier Intes
Journal:  Acad Radiol       Date:  2014-02       Impact factor: 3.173

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  14 in total

1.  Wide-field fluorescence molecular tomography with compressive sensing based preconditioning.

Authors:  Ruoyang Yao; Qi Pian; Xavier Intes
Journal:  Biomed Opt Express       Date:  2015-11-17       Impact factor: 3.732

2.  Simulation study on compressive laminar optical tomography for cardiac action potential propagation.

Authors:  Takumi Harada; Naoki Tomii; Shota Manago; Etsuko Kobayashi; Ichiro Sakuma
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3.  Dental optical tomography with upconversion nanoparticles-a feasibility study.

Authors:  Feixiao Long; Xavier Intes
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4.  Sparse Reconstruction of Fluorescence Molecular Tomography Using Variable Splitting and Alternating Direction Scheme.

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Journal:  Mol Imaging Biol       Date:  2018-02       Impact factor: 3.488

Review 5.  Review of mesoscopic optical tomography for depth-resolved imaging of hemodynamic changes and neural activities.

Authors:  Qinggong Tang; Jonathan Lin; Vassiliy Tsytsarev; Reha S Erzurumlu; Yi Liu; Yu Chen
Journal:  Neurophotonics       Date:  2016-11-14       Impact factor: 3.593

6.  Improving mesoscopic fluorescence molecular tomography via preconditioning and regularization.

Authors:  Fugang Yang; Ruoyang Yao; Mehmet Ozturk; Denzel Faulkner; Qinglan Qu; Xavier Intes
Journal:  Biomed Opt Express       Date:  2018-05-23       Impact factor: 3.732

7.  Improving mesoscopic fluorescence molecular tomography through data reduction.

Authors:  Fugang Yang; Mehmet S Ozturk; Ruoyang Yao; Xavier Intes
Journal:  Biomed Opt Express       Date:  2017-07-28       Impact factor: 3.732

8.  Design and characterization of a dead-time regime enhanced early photon projection imaging system.

Authors:  L Sinha; M Fogarty; W Zhou; A Giudice; J G Brankov; K M Tichauer
Journal:  Rev Sci Instrum       Date:  2018-04       Impact factor: 1.523

9.  System configuration optimization for mesoscopic fluorescence molecular tomography.

Authors:  Fugang Yang; Denzel Faulkner; Ruoyang Yao; Mehmet S Ozturk; Qinglan Qu; Xavier Intes
Journal:  Biomed Opt Express       Date:  2019-10-11       Impact factor: 3.732

Review 10.  Review of quantitative multiscale imaging of breast cancer.

Authors:  Michael A Pinkert; Lonie R Salkowski; Patricia J Keely; Timothy J Hall; Walter F Block; Kevin W Eliceiri
Journal:  J Med Imaging (Bellingham)       Date:  2018-01-22
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