Literature DB >> 24940192

Di-chlorido-(N,N-diethyl-4-{[(quinolin-2-yl)methyl-idene]amino-κ(2) N,N'}aniline)mercury(II).

Md Serajul Haque Faizi1, Sahid Hussain2.   

Abstract

In the mononuclear title complex, [HgCl2(C20H21N3)], synthesized from the quinoline-derived Schiff base N (1),N (1)-diethyl-N (4)-(quinolin-2-yl-methyl-idene)benzene-1,4-di-amine (QMBD), the coordination geometry around the Hg(2+) atom is distorted tetra-hedral, comprising two Cl atoms [Hg-Cl = 2.3654 (19) and 2.4394 (18) Å] and two N-atom donors from the QMBD ligand, viz. one imine and quinoline [Hg-N = 2.334 (5) and 2.340 (5) Å, respectively]. In the crystal, weak C-H⋯Cl hydrogen bonds and weak π-π aromatic ring stacking inter-actions [minimum ring-centroid separation = 3.680 (4) Å] give an overall three-dimensional network.

Entities:  

Year:  2014        PMID: 24940192      PMCID: PMC4051090          DOI: 10.1107/S160053681400957X

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For applications of quinolyl imine and related structures, see: Mandal et al. (2012 ▶); Motswainyana et al. (2013 ▶); Das et al. (2013 ▶); Song et al. (2011 ▶); Jursic et al. (2002 ▶); Marjani et al. (2009 ▶); Faizi & Sen (2014 ▶).

Experimental

Crystal data

[HgCl2(C20H21N3)] M = 574.89 Monoclinic, a = 8.8522 (19) Å b = 9.474 (2) Å c = 23.512 (5) Å β = 97.446 (4)° V = 1955.2 (7) Å3 Z = 4 Mo Kα radiation μ = 8.15 mm−1 T = 100 K 0.26 × 0.18 × 0.13 mm

Data collection

Bruker SMART APEX CCD diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 2004 ▶) T min = 0.226, T max = 0.417 9875 measured reflections 3438 independent reflections 2979 reflections with I > 2σ(I) R int = 0.034

Refinement

R[F 2 > 2σ(F 2)] = 0.029 wR(F 2) = 0.089 S = 1.17 3438 reflections 233 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 1.91 e Å−3 Δρmin = −1.07 e Å−3 Data collection: SMART (Bruker, 2003 ▶); cell refinement: SAINT (Bruker, 2003 ▶); data reduction: SAINT; program(s) used to solve structure: SIR97 (Altomare et al., 1999 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: DIAMOND (Brandenburg & Putz, 2006 ▶); software used to prepare material for publication: DIAMOND. Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S160053681400957X/zs2295sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S160053681400957X/zs2295Isup2.hkl CCDC reference: 999849 Additional supporting information: crystallographic information; 3D view; checkCIF report
[HgCl2(C20H21N3)]F(000) = 1104
Mr = 574.89Dx = 1.953 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 999 reflections
a = 8.8522 (19) Åθ = 2.1–28.2°
b = 9.474 (2) ŵ = 8.15 mm1
c = 23.512 (5) ÅT = 100 K
β = 97.446 (4)°Block, yellow
V = 1955.2 (7) Å30.26 × 0.18 × 0.13 mm
Z = 4
Bruker SMART APEX CCD diffractometer3438 independent reflections
Radiation source: fine-focus sealed tube2979 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.034
ω scansθmax = 25.0°, θmin = 1.8°
Absorption correction: multi-scan (SADABS; Sheldrick, 2004)h = −10→7
Tmin = 0.226, Tmax = 0.417k = −11→11
9875 measured reflectionsl = −27→27
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.029Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.089H atoms treated by a mixture of independent and constrained refinement
S = 1.17w = 1/[σ2(Fo2) + (0.0308P)2 + 10.3789P] where P = (Fo2 + 2Fc2)/3
3438 reflections(Δ/σ)max < 0.001
233 parametersΔρmax = 1.91 e Å3
0 restraintsΔρmin = −1.07 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.8207 (7)0.4421 (7)1.0240 (3)0.0184 (10)
C20.6971 (8)0.5234 (7)0.9970 (3)0.0225 (15)
H20.65640.50350.95940.027*
C30.6374 (8)0.6313 (7)1.0260 (3)0.0253 (16)
H30.55750.68531.00780.030*
C40.6962 (8)0.6602 (7)1.0826 (3)0.0221 (15)
H40.65400.73261.10210.027*
C50.8150 (9)0.5836 (7)1.1100 (3)0.0268 (16)
H50.85210.60411.14790.032*
C60.8819 (8)0.4740 (7)1.0813 (3)0.0218 (15)
C71.0050 (8)0.3942 (6)1.1069 (3)0.0211 (14)
H71.04510.41071.14480.025*
C81.0667 (7)0.2912 (7)1.0759 (3)0.0198 (14)
H81.15090.23981.09210.024*
C90.9991 (8)0.2638 (6)1.0179 (3)0.0171 (14)
C101.0694 (7)0.1553 (7)0.9856 (3)0.0184 (10)
C111.0772 (7)0.0274 (6)0.9004 (3)0.0169 (13)
C121.2176 (8)−0.0386 (6)0.9159 (3)0.0198 (14)
H121.2724−0.01790.95140.024*
C131.2770 (8)−0.1323 (7)0.8809 (3)0.0230 (15)
H131.3710−0.17320.89330.028*
C141.2006 (8)−0.1695 (7)0.8265 (3)0.0201 (14)
C151.0599 (7)−0.1020 (6)0.8098 (3)0.0167 (13)
H151.0055−0.12270.77420.020*
C161.0010 (8)−0.0056 (7)0.8452 (3)0.0190 (14)
H160.90910.03880.83250.023*
C171.4009 (8)−0.3421 (7)0.8108 (3)0.0236 (15)
H17A1.3981−0.43060.78990.028*
H17B1.4031−0.36450.85120.028*
C181.5448 (9)−0.2657 (7)0.8027 (4)0.0333 (19)
H18A1.6310−0.32330.81650.050*
H18B1.5498−0.17860.82370.050*
H18C1.5457−0.24620.76270.050*
C191.1893 (9)−0.2913 (7)0.7336 (3)0.0261 (16)
H19A1.2676−0.32010.71070.031*
H19B1.1440−0.20490.71710.031*
C201.0669 (8)−0.4057 (7)0.7300 (3)0.0262 (16)
H20A1.0250−0.41970.69070.039*
H20B0.9874−0.37700.75170.039*
H20C1.1112−0.49230.74540.039*
N10.8788 (6)0.3370 (5)0.9937 (2)0.0136 (11)
N21.0102 (6)0.1260 (5)0.9339 (2)0.0158 (11)
N31.2599 (6)−0.2626 (5)0.7915 (2)0.0193 (12)
Cl10.7217 (2)0.37547 (19)0.82157 (8)0.0343 (5)
Cl20.61076 (19)0.05105 (18)0.93193 (7)0.0275 (4)
Hg10.77787 (3)0.23825 (3)0.905699 (10)0.01999 (11)
H10C1.155 (5)0.115 (8)1.004 (3)0.04 (2)*
U11U22U33U12U13U23
C10.013 (2)0.019 (2)0.026 (3)−0.0041 (18)0.014 (2)0.0005 (19)
C20.020 (4)0.024 (4)0.022 (4)−0.006 (3)−0.002 (3)−0.001 (3)
C30.022 (4)0.016 (3)0.039 (4)−0.007 (3)0.008 (3)−0.007 (3)
C40.019 (4)0.024 (4)0.025 (4)−0.006 (3)0.010 (3)−0.002 (3)
C50.034 (4)0.025 (4)0.020 (4)−0.011 (3)0.000 (3)−0.004 (3)
C60.028 (4)0.013 (3)0.025 (4)−0.006 (3)0.003 (3)0.000 (3)
C70.021 (4)0.018 (3)0.024 (4)−0.011 (3)0.005 (3)0.001 (3)
C80.017 (3)0.028 (4)0.012 (3)−0.003 (3)−0.006 (3)0.002 (3)
C90.019 (4)0.019 (3)0.013 (3)−0.010 (3)0.001 (3)0.001 (2)
C100.013 (2)0.019 (2)0.026 (3)−0.0041 (18)0.014 (2)0.0005 (19)
C110.021 (4)0.007 (3)0.021 (3)0.001 (3)−0.002 (3)−0.001 (2)
C120.024 (4)0.013 (3)0.022 (3)−0.007 (3)0.001 (3)0.000 (3)
C130.018 (4)0.014 (3)0.036 (4)0.003 (3)−0.002 (3)0.004 (3)
C140.021 (4)0.022 (4)0.017 (3)−0.005 (3)0.001 (3)−0.001 (3)
C150.019 (3)0.013 (3)0.016 (3)−0.003 (3)−0.005 (3)0.002 (2)
C160.020 (3)0.014 (3)0.022 (4)0.005 (3)−0.001 (3)0.005 (3)
C170.022 (4)0.015 (3)0.033 (4)0.004 (3)0.003 (3)−0.003 (3)
C180.022 (4)0.024 (4)0.054 (5)0.006 (3)0.006 (4)0.008 (3)
C190.038 (4)0.015 (3)0.027 (4)0.003 (3)0.013 (3)−0.001 (3)
C200.031 (4)0.028 (4)0.016 (3)−0.004 (3)−0.008 (3)−0.004 (3)
N10.014 (3)0.013 (3)0.014 (3)−0.008 (2)0.002 (2)−0.001 (2)
N20.013 (3)0.016 (3)0.018 (3)0.002 (2)0.002 (2)0.002 (2)
N30.018 (3)0.017 (3)0.025 (3)0.002 (2)0.010 (2)0.000 (2)
Cl10.0427 (12)0.0243 (9)0.0308 (10)−0.0061 (8)−0.0144 (8)0.0075 (7)
Cl20.0202 (9)0.0320 (9)0.0285 (9)−0.0071 (7)−0.0035 (7)0.0050 (7)
Hg10.01749 (17)0.02169 (16)0.02002 (16)0.00000 (10)−0.00049 (11)−0.00019 (10)
Hg1—Cl12.3654 (19)C14—C151.410 (9)
Hg1—Cl22.4394 (18)C15—C161.383 (9)
Hg1—N12.340 (5)C17—C181.499 (10)
Hg1—N22.334 (5)C19—C201.527 (10)
N1—C11.363 (8)C2—H20.9300
N1—C91.335 (8)C3—H30.9300
N2—C101.290 (8)C4—H40.9300
N2—C111.402 (8)C5—H50.9300
N3—C141.358 (8)C7—H70.9300
N3—C171.478 (9)C8—H80.9300
N3—C191.448 (9)C10—H10C0.91 (6)
C1—C21.419 (10)C12—H120.9300
C1—C61.418 (10)C13—H130.9300
C2—C31.372 (10)C15—H150.9300
C3—C41.392 (10)C16—H160.9300
C4—C51.368 (10)C17—H17A0.9700
C5—C61.410 (10)C17—H17B0.9700
C6—C71.397 (10)C18—H18A0.9600
C7—C81.373 (9)C18—H18B0.9600
C8—C91.440 (10)C18—H18C0.9600
C9—C101.464 (9)C19—H19A0.9700
C11—C121.397 (9)C19—H19B0.9700
C11—C161.418 (10)C20—H20A0.9600
C12—C131.362 (9)C20—H20B0.9600
C13—C141.412 (10)C20—H20C0.9600
Cl1—Hg1—Cl2122.85 (6)C3—C2—H2120.00
Cl1—Hg1—N1122.31 (12)C2—C3—H3120.00
Cl1—Hg1—N2124.75 (13)C4—C3—H3120.00
Cl2—Hg1—N1103.99 (13)C3—C4—H4119.00
Cl2—Hg1—N297.92 (13)C5—C4—H4120.00
N1—Hg1—N273.11 (17)C4—C5—H5120.00
Hg1—N1—C1128.9 (4)C6—C5—H5120.00
Hg1—N1—C9111.2 (4)C6—C7—H7120.00
C1—N1—C9119.4 (5)C8—C7—H7120.00
Hg1—N2—C10113.9 (4)C7—C8—H8121.00
Hg1—N2—C11124.4 (4)C9—C8—H8120.00
C10—N2—C11121.5 (5)N2—C10—H10C125 (4)
C14—N3—C17121.5 (5)C9—C10—H10C116 (5)
C14—N3—C19122.6 (6)C11—C12—H12119.00
C17—N3—C19115.9 (5)C13—C12—H12119.00
N1—C1—C2118.9 (6)C12—C13—H13119.00
N1—C1—C6121.9 (6)C14—C13—H13119.00
C2—C1—C6119.1 (6)C14—C15—H15119.00
C1—C2—C3120.4 (6)C16—C15—H15119.00
C2—C3—C4120.1 (6)C11—C16—H16119.00
C3—C4—C5121.0 (6)C15—C16—H16119.00
C4—C5—C6120.7 (6)N3—C17—H17A109.00
C1—C6—C5118.6 (6)N3—C17—H17B109.00
C1—C6—C7118.3 (6)C18—C17—H17A109.00
C5—C6—C7123.0 (6)C18—C17—H17B109.00
C6—C7—C8119.9 (6)H17A—C17—H17B108.00
C7—C8—C9119.1 (6)C17—C18—H18A110.00
N1—C9—C8121.4 (6)C17—C18—H18B109.00
N1—C9—C10120.9 (6)C17—C18—H18C109.00
C8—C9—C10117.7 (6)H18A—C18—H18B109.00
N2—C10—C9119.5 (6)H18A—C18—H18C109.00
N2—C11—C12125.4 (6)H18B—C18—H18C109.00
N2—C11—C16118.4 (6)N3—C19—H19A109.00
C12—C11—C16116.2 (6)N3—C19—H19B109.00
C11—C12—C13122.3 (6)C20—C19—H19A109.00
C12—C13—C14122.2 (7)C20—C19—H19B109.00
N3—C14—C13122.3 (6)H19A—C19—H19B108.00
N3—C14—C15121.5 (6)C19—C20—H20A110.00
C13—C14—C15116.2 (6)C19—C20—H20B109.00
C14—C15—C16121.4 (6)C19—C20—H20C109.00
C11—C16—C15121.7 (6)H20A—C20—H20B109.00
N3—C17—C18114.4 (6)H20A—C20—H20C109.00
N3—C19—C20113.7 (6)H20B—C20—H20C109.00
C1—C2—H2120.00
C6—C1—C2—C3−0 (1)N2—C11—C16—C15−179.8 (6)
N1—C1—C2—C3−179.0 (6)C12—C11—N2—C10−6 (1)
C2—C1—C6—C52 (1)C12—C11—N2—Hg1178.5 (5)
C2—C1—C6—C7−179.1 (6)C16—C11—N2—C10176.3 (6)
N1—C1—C6—C5−179.6 (6)C16—C11—N2—Hg11.1 (8)
N1—C1—C6—C7−0 (1)C11—C12—C13—C14−0 (1)
C2—C1—N1—C9177.2 (6)C12—C13—C14—C151 (1)
C2—C1—N1—Hg1−12.2 (9)C12—C13—C14—N3179.8 (6)
C6—C1—N1—C9−1.7 (9)C13—C14—C15—C16−0 (1)
C6—C1—N1—Hg1169.0 (5)N3—C14—C15—C16−179.0 (6)
C1—C2—C3—C4−1 (1)C13—C14—N3—C177 (1)
C2—C3—C4—C51 (1)C13—C14—N3—C19−174.1 (6)
C3—C4—C5—C61 (1)C15—C14—N3—C17−174.9 (6)
C4—C5—C6—C1−2 (1)C15—C14—N3—C195 (1)
C4—C5—C6—C7178.9 (7)C14—C15—C16—C11−2 (1)
C1—C6—C7—C82 (1)C18—C17—N3—C14−86.3 (8)
C5—C6—C7—C8−178.5 (7)C18—C17—N3—C1994.3 (7)
C6—C7—C8—C9−2 (1)C20—C19—N3—C14−86.4 (8)
C7—C8—C9—C10178.8 (6)C20—C19—N3—C1793.1 (7)
C7—C8—C9—N10 (1)C1—N1—Hg1—N2178.5 (6)
C8—C9—C10—N2178.7 (6)C1—N1—Hg1—Cl157.6 (5)
N1—C9—C10—N2−3 (1)C1—N1—Hg1—Cl2−87.3 (5)
C8—C9—N1—C11.5 (9)C9—N1—Hg1—N2−10.3 (4)
C8—C9—N1—Hg1−170.7 (5)C9—N1—Hg1—Cl1−131.1 (4)
C10—C9—N1—C1−176.8 (6)C9—N1—Hg1—Cl283.9 (4)
C10—C9—N1—Hg111.1 (7)C10—N2—Hg1—N19.2 (4)
C9—C10—N2—C11177.2 (6)C10—N2—Hg1—Cl1127.2 (4)
C9—C10—N2—Hg1−7.1 (8)C10—N2—Hg1—Cl2−93.0 (4)
C16—C11—C12—C13−2 (1)C11—N2—Hg1—N1−175.2 (5)
N2—C11—C12—C13−179.2 (6)C11—N2—Hg1—Cl1−57.2 (5)
C12—C11—C16—C152 (1)C11—N2—Hg1—Cl282.6 (5)
D—H···AD—HH···AD···AD—H···A
C12—H12···Cl2i0.932.823.703 (7)159
C15—H15···Cl1ii0.932.823.715 (7)162
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
C12—H12⋯Cl2i 0.932.823.703 (7)159
C15—H15⋯Cl1ii 0.932.823.715 (7)162

Symmetry codes: (i) ; (ii) .

  4 in total

1.  Recognition of Hg2+ ion through restricted imine isomerization: crystallographic evidence and imaging in live cells.

Authors:  Amal Kumar Mandal; Moorthy Suresh; Priyadip Das; E Suresh; Mithu Baidya; Sudip K Ghosh; Amitava Das
Journal:  Org Lett       Date:  2012-06-07       Impact factor: 6.005

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  Designing a thiol specific fluorescent probe for possible use as a reagent for intracellular detection and estimation in blood serum: kinetic analysis to probe the role of intramolecular hydrogen bonding.

Authors:  Priyadip Das; Amal Kumar Mandal; Upendar Reddy G; Mithu Baidya; Sudip K Ghosh; Amitava Das
Journal:  Org Biomol Chem       Date:  2013-08-29       Impact factor: 3.876

4.  Di-chlorido-(4-{[(quinolin-2-yl)methyl-idene]amino}phenol-κ(2) N,N')mercury(II).

Authors:  Md Serajul Haque Faizi; Pratik Sen
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2014-04-09
  4 in total
  10 in total

1.  Crystal structure of di-bromido-(N,N-di-methyl-formamide-κO){2-(1H-indol-3-yl)-N-[(quinolin-2-yl-κN)methyl-idene]ethanamine-κN}cadmium.

Authors:  Md Serajul Haque Faizi; Natalia O Sharkina; Yuliya M Davydenko
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2015-01-21

2.  Crystal structure of di-chlorido-{N (1)-phenyl-N (4)-[(quinolin-2-yl-κN)methylidene]benzene-1,4-diamine-κN (4)}mercury(II).

Authors:  Md Serajul Haque Faizi; Elena V Prisyazhnaya; Turganbay S Iskenderov
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2015-01-31

3.  Crystal structure of (E)-2-{[(4-anilinophen-yl)imino]-meth-yl}phenol.

Authors:  Md Serajul Haque Faizi; Turganbay S Iskenderov; Natalia O Sharkina
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2015-01-01

4.  Crystal structure of N (1),N (1)-diethyl-N (4)-[(quinolin-2-yl)methyl-idene]benzene-1,4-di-amine.

Authors:  Md Serajul Haque Faizi; Nazia Siddiqui; Saleem Javed
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2015-01-01

5.  Crystal structure of 2-{[(E)-(4-anilinophen-yl)iminium-yl]meth-yl}-5-(di-ethyl-amino)-phenolate.

Authors:  Md Serajul Haque Faizi; Kateryna A Ohui; Irina A Golenya
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2015-11-04

6.  Crystal structure of di-μ-chlorido-bis-(chlorido-{N1,N1-diethyl-N4-[(pyridin-2-yl-κN)methyl-idene]benzene-1,4-di-amine-κN4}mercury(II)).

Authors:  Md Serajul Haque Faizi; Necmi Dege; Kateryna Goleva
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2017-05-05

Review 7.  Scribbling the Cat: A Case of the "Miracle" Plant, Moringa oleifera.

Authors:  Thulani Tshabalala; Bhekumthetho Ncube; Ntakadzeni Edwin Madala; Trevor Tapiwa Nyakudya; Hloniphani Peter Moyo; Mbulisi Sibanda; Ashwell Rungano Ndhlala
Journal:  Plants (Basel)       Date:  2019-11-15

8.  N (1)-[(1H-Imidazol-2-yl)methyl-idene]-N (4)-phenyl-benzene-1,4-di-amine.

Authors:  Md Serajul Haque Faizi; Ashraf Mashrai; M Shahid; Musheer Ahmad
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2014-06-25

9.  Crystal structure of N (1)-phenyl-N (4)-[(quinolin-2-yl)methyl-idene]benzene-1,4-di-amine.

Authors:  Md Serajul Haque Faizi; Ashraf Mashrai; Saleem Garandal; M Shahid
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2014-08-01

10.  Crystal structure and DFT study of (E)-4-[({4-[(pyri-din-2-yl-methyl-idene)amino]-phen-yl}amino)-meth-yl]phenol.

Authors:  Md Serajul Haque Faizi; Necmi Dege; Turganbay S Iskenderov
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2018-02-28
  10 in total

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