Literature DB >> 24860307

Di-chlorido-(4-{[(quinolin-2-yl)methyl-idene]amino}phenol-κ(2) N,N')mercury(II).

Md Serajul Haque Faizi1, Pratik Sen1.   

Abstract

In the mononuclear title complex, [HgCl2(C16H12N2O)], synthesized from the phenolic Schiff base 4-[(quinolin-2-yl-methyl-idene)amino]-phenol (QMAP), the coordination geometry around Hg(2+) is distorted tetra-hedral, comprising two Cl atoms [Hg-Cl = 2.3565 (12) and 2.5219 (12) Å] and two N-atom donors from the QMAP ligand, viz. one imine and the other quinoline [Hg-N = 2.392 (2) and 2.237 (2) Å, respectively]. In the crystal, O-H⋯Cl hydrogen bonds generate a chain structure extending along the c-axis direction. Weak C-H⋯Cl and π-π stacking inter-actions [minimum ring centroid separation = 3.641 (3) Å] give an overall layered structure lying parallel to (001).

Entities:  

Year:  2014        PMID: 24860307      PMCID: PMC4011313          DOI: 10.1107/S1600536814007077

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For applications of 4-[(quinolin-2-ylmethylene)amino]phenol and related structures, see: Das et al. (2013 ▶); Jursic et al. (2002 ▶). For a related structure, see: Marjani et al. (2009 ▶).

Experimental

Crystal data

[HgCl2(C16H12N2O)] M = 519.77 Monoclinic, a = 7.539 (5) Å b = 18.551 (5) Å c = 10.806 (5) Å β = 94.380 (5)° V = 1506.9 (13) Å3 Z = 4 Mo Kα radiation μ = 10.57 mm−1 T = 100 K 0.29 × 0.19 × 0.12 mm

Data collection

Bruker SMART APEX CCD diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 2004 ▶) T min = 0.143, T max = 0.352 11156 measured reflections 2967 independent reflections 2679 reflections with I > 2σ(I) R int = 0.024

Refinement

R[F 2 > 2σ(F 2)] = 0.016 wR(F 2) = 0.035 S = 1.05 2967 reflections 200 parameters 1 restraint H-atom parameters constrained Δρmax = 0.65 e Å−3 Δρmin = −0.40 e Å−3 Data collection: SMART (Bruker, 2003 ▶); cell refinement: SAINT (Bruker, 2003 ▶); data reduction: SAINT; program(s) used to solve structure: SIR97 (Altomare et al., 1999 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: DIAMOND (Brandenberg & Putz, 2006 ▶); software used to prepare material for publication: DIAMOND (Brandenberg & Putz, 2006 ▶). Crystal structure: contains datablock(s) global, I. DOI: 10.1107/S1600536814007077/zs2293sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536814007077/zs2293Isup2.hkl CCDC reference: 994407 Additional supporting information: crystallographic information; 3D view; checkCIF report
[HgCl2(C16H12N2O)]F(000) = 976
Mr = 519.77Dx = 2.291 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 999 reflections
a = 7.539 (5) Åθ = 1.8–25.5°
b = 18.551 (5) ŵ = 10.57 mm1
c = 10.806 (5) ÅT = 100 K
β = 94.380 (5)°Needle, yellow
V = 1506.9 (13) Å30.29 × 0.19 × 0.12 mm
Z = 4
Bruker SMART APEX CCD diffractometer2967 independent reflections
Radiation source: fine-focus sealed tube2679 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.024
ω scansθmax = 26.0°, θmin = 2.2°
Absorption correction: multi-scan (SADABS; Sheldrick, 2004)h = −9→9
Tmin = 0.143, Tmax = 0.352k = −22→22
11156 measured reflectionsl = −13→10
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.016Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.035H-atom parameters constrained
S = 1.05w = 1/[σ2(Fo2) + (0.0146P)2 + 0.8024P] where P = (Fo2 + 2Fc2)/3
2967 reflections(Δ/σ)max < 0.001
200 parametersΔρmax = 0.65 e Å3
1 restraintΔρmin = −0.40 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.7674 (4)1.15360 (15)−0.3705 (3)0.0140 (6)
C20.8429 (4)1.17912 (16)−0.2579 (3)0.0147 (6)
H20.89871.2238−0.25350.018*
C30.8345 (4)1.13750 (15)−0.1520 (3)0.0143 (6)
H30.88421.1548−0.07640.017*
C40.7528 (4)1.07023 (15)−0.1574 (3)0.0124 (6)
C50.6783 (4)1.04481 (16)−0.2710 (3)0.0141 (6)
H50.62350.9999−0.27570.017*
C60.6857 (4)1.08617 (15)−0.3766 (3)0.0140 (6)
H60.63591.0689−0.45220.017*
C70.6910 (4)0.96599 (16)−0.0438 (3)0.0124 (6)
C80.6931 (4)0.92330 (15)0.0707 (3)0.0120 (6)
C90.6343 (4)0.85181 (15)0.0639 (3)0.0135 (6)
H90.59370.8318−0.01190.016*
C100.6374 (4)0.81183 (16)0.1701 (3)0.0150 (6)
H100.59810.76430.16710.018*
C110.6999 (4)0.84260 (15)0.2837 (3)0.0132 (6)
C120.7564 (4)0.91591 (15)0.2848 (3)0.0116 (6)
C130.8157 (4)0.94846 (16)0.3981 (3)0.0153 (6)
H130.85370.99620.39940.018*
C140.8176 (4)0.91016 (16)0.5057 (3)0.0176 (7)
H140.85560.93230.58030.021*
C150.7628 (4)0.83733 (16)0.5061 (3)0.0180 (7)
H150.76560.81190.58040.022*
C160.7061 (4)0.80451 (16)0.3977 (3)0.0163 (6)
H160.67090.75650.39840.020*
N10.7487 (3)1.03052 (12)−0.0449 (2)0.0113 (5)
N20.7526 (3)0.95410 (13)0.1765 (2)0.0117 (5)
O10.7768 (3)1.19596 (11)−0.47207 (19)0.0199 (5)
H10.73241.1748−0.53340.030*
Hg10.832221 (15)1.069766 (6)0.162214 (10)0.01536 (4)
Cl11.07921 (9)1.14792 (4)0.18122 (6)0.01560 (15)
Cl20.59358 (10)1.13188 (4)0.27415 (7)0.01732 (15)
H70.65000.9430−0.11600.0140*
U11U22U33U12U13U23
C10.0159 (15)0.0118 (15)0.0148 (14)0.0042 (12)0.0041 (12)0.0050 (12)
C20.0147 (15)0.0108 (15)0.0188 (16)0.0003 (12)0.0022 (12)0.0008 (12)
C30.0151 (15)0.0153 (15)0.0127 (14)0.0015 (12)0.0023 (12)−0.0007 (12)
C40.0112 (14)0.0138 (15)0.0123 (14)0.0043 (12)0.0019 (11)0.0004 (12)
C50.0157 (15)0.0112 (14)0.0154 (15)−0.0003 (12)0.0006 (12)0.0001 (12)
C60.0163 (15)0.0153 (16)0.0103 (14)0.0007 (12)0.0008 (12)−0.0011 (11)
C70.0122 (14)0.0133 (15)0.0116 (14)0.0012 (12)0.0011 (12)−0.0029 (12)
C80.0099 (13)0.0120 (15)0.0142 (14)0.0011 (12)0.0011 (11)−0.0008 (12)
C90.0154 (15)0.0129 (15)0.0122 (14)−0.0018 (12)0.0000 (12)−0.0045 (12)
C100.0176 (15)0.0090 (14)0.0191 (15)−0.0002 (12)0.0052 (13)−0.0016 (12)
C110.0132 (14)0.0133 (15)0.0134 (14)0.0022 (12)0.0034 (12)−0.0010 (12)
C120.0100 (13)0.0138 (15)0.0114 (14)0.0019 (11)0.0033 (11)0.0012 (11)
C130.0171 (15)0.0106 (15)0.0180 (15)−0.0021 (12)0.0009 (13)−0.0001 (12)
C140.0237 (16)0.0167 (16)0.0121 (15)−0.0006 (13)−0.0014 (13)−0.0023 (12)
C150.0221 (16)0.0180 (16)0.0135 (15)0.0005 (13)−0.0003 (13)0.0046 (12)
C160.0211 (16)0.0096 (15)0.0183 (16)−0.0006 (12)0.0029 (13)0.0019 (12)
N10.0116 (12)0.0109 (13)0.0114 (12)0.0011 (10)0.0018 (10)−0.0005 (10)
N20.0120 (12)0.0088 (12)0.0143 (12)0.0006 (10)0.0008 (10)0.0005 (10)
O10.0322 (13)0.0140 (11)0.0134 (10)−0.0044 (10)0.0012 (10)0.0040 (9)
Hg10.02022 (7)0.01239 (6)0.01368 (6)−0.00471 (5)0.00259 (4)−0.00206 (5)
Cl10.0152 (3)0.0146 (4)0.0169 (3)−0.0022 (3)0.0008 (3)−0.0007 (3)
Cl20.0177 (4)0.0182 (4)0.0161 (4)0.0002 (3)0.0018 (3)−0.0042 (3)
C1—O11.356 (3)C10—C111.402 (4)
C1—C21.386 (4)C10—H100.9300
C1—C61.394 (4)C11—C161.418 (4)
C2—C31.386 (4)C11—C121.425 (4)
C2—H20.9300C12—N21.366 (4)
C3—C41.391 (4)C12—C131.407 (4)
C3—H30.9300C13—C141.363 (4)
C4—C51.393 (4)C13—H130.9300
C4—N11.424 (4)C14—C151.413 (4)
C5—C61.379 (4)C14—H140.9300
C5—H50.9300C15—C161.360 (4)
C6—H60.9300C15—H150.9300
C7—N11.274 (4)C16—H160.9300
C7—C81.469 (4)N1—Hg12.392 (2)
C7—H70.9170N2—Hg12.237 (2)
C8—N21.325 (4)O1—H10.8200
C8—C91.398 (4)Hg1—Cl12.3565 (12)
C9—C101.365 (4)Hg1—Cl22.5219 (12)
C9—H90.9300
O1—C1—C2118.0 (3)C10—C11—C12118.4 (3)
O1—C1—C6122.2 (3)C16—C11—C12118.6 (3)
C2—C1—C6119.9 (3)N2—C12—C13120.5 (3)
C3—C2—C1119.5 (3)N2—C12—C11120.1 (3)
C3—C2—H2120.2C13—C12—C11119.5 (3)
C1—C2—H2120.2C14—C13—C12120.1 (3)
C2—C3—C4120.9 (3)C14—C13—H13120.0
C2—C3—H3119.6C12—C13—H13120.0
C4—C3—H3119.6C13—C14—C15121.1 (3)
C3—C4—C5119.2 (3)C13—C14—H14119.4
C3—C4—N1117.8 (2)C15—C14—H14119.4
C5—C4—N1122.9 (3)C16—C15—C14119.9 (3)
C6—C5—C4120.1 (3)C16—C15—H15120.1
C6—C5—H5119.9C14—C15—H15120.1
C4—C5—H5119.9C15—C16—C11120.8 (3)
C5—C6—C1120.4 (3)C15—C16—H16119.6
C5—C6—H6119.8C11—C16—H16119.6
C1—C6—H6119.8C7—N1—C4121.6 (2)
N1—C7—C8122.2 (3)C7—N1—Hg1110.07 (19)
N1—C7—H7121.0C4—N1—Hg1128.32 (18)
C8—C7—H7116.0C8—N2—C12119.9 (2)
N2—C8—C9122.6 (3)C8—N2—Hg1115.40 (19)
N2—C8—C7118.4 (3)C12—N2—Hg1124.64 (19)
C9—C8—C7119.0 (3)C1—O1—H1109.5
C10—C9—C8119.1 (3)N2—Hg1—Cl1143.01 (6)
C10—C9—H9120.4N2—Hg1—N173.73 (8)
C8—C9—H9120.5Cl1—Hg1—N1114.76 (6)
C9—C10—C11119.8 (3)N2—Hg1—Cl2101.54 (7)
C9—C10—H10120.1Cl1—Hg1—Cl2105.37 (4)
C11—C10—H10120.1N1—Hg1—Cl2116.19 (6)
C10—C11—C16123.0 (3)
O1—C1—C2—C3179.5 (3)C12—C11—C16—C150.7 (4)
C6—C1—C2—C3−0.7 (4)C8—C7—N1—C4177.3 (3)
C1—C2—C3—C40.6 (4)C8—C7—N1—Hg1−4.5 (3)
C2—C3—C4—C5−0.2 (4)C3—C4—N1—C7−173.5 (3)
C2—C3—C4—N1−179.8 (3)C5—C4—N1—C76.8 (4)
C3—C4—C5—C6−0.1 (4)C3—C4—N1—Hg18.6 (4)
N1—C4—C5—C6179.5 (3)C5—C4—N1—Hg1−171.1 (2)
C4—C5—C6—C1−0.1 (4)C9—C8—N2—C12−0.6 (4)
O1—C1—C6—C5−179.7 (3)C7—C8—N2—C12180.0 (2)
C2—C1—C6—C50.5 (4)C9—C8—N2—Hg1−178.6 (2)
N1—C7—C8—N22.0 (4)C7—C8—N2—Hg12.1 (3)
N1—C7—C8—C9−177.4 (3)C13—C12—N2—C8−178.7 (3)
N2—C8—C9—C100.2 (4)C11—C12—N2—C81.3 (4)
C7—C8—C9—C10179.5 (3)C13—C12—N2—Hg1−1.0 (4)
C8—C9—C10—C11−0.3 (4)C11—C12—N2—Hg1178.98 (19)
C9—C10—C11—C16179.7 (3)C8—N2—Hg1—Cl1−112.83 (19)
C9—C10—C11—C120.9 (4)C12—N2—Hg1—Cl169.4 (2)
C10—C11—C12—N2−1.4 (4)C8—N2—Hg1—N1−3.10 (19)
C16—C11—C12—N2179.8 (3)C12—N2—Hg1—N1179.1 (2)
C10—C11—C12—C13178.5 (3)C8—N2—Hg1—Cl2111.08 (19)
C16—C11—C12—C13−0.3 (4)C12—N2—Hg1—Cl2−66.7 (2)
N2—C12—C13—C14179.4 (3)C7—N1—Hg1—N23.94 (18)
C11—C12—C13—C14−0.5 (4)C4—N1—Hg1—N2−178.0 (2)
C12—C13—C14—C150.9 (5)C7—N1—Hg1—Cl1145.35 (17)
C13—C14—C15—C16−0.4 (5)C4—N1—Hg1—Cl1−36.6 (2)
C14—C15—C16—C11−0.4 (5)C7—N1—Hg1—Cl2−91.15 (19)
C10—C11—C16—C15−178.0 (3)C4—N1—Hg1—Cl287.0 (2)
D—H···AD—HH···AD···AD—H···A
O1—H1···Cl2i0.822.393.204 (3)171
C7—H7···Cl2ii0.922.783.644 (4)156
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
O1—H1⋯Cl2i 0.822.393.204 (3)171
C7—H7⋯Cl2ii 0.922.783.644 (4)156

Symmetry codes: (i) ; (ii) .

  2 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Designing a thiol specific fluorescent probe for possible use as a reagent for intracellular detection and estimation in blood serum: kinetic analysis to probe the role of intramolecular hydrogen bonding.

Authors:  Priyadip Das; Amal Kumar Mandal; Upendar Reddy G; Mithu Baidya; Sudip K Ghosh; Amitava Das
Journal:  Org Biomol Chem       Date:  2013-08-29       Impact factor: 3.876

  2 in total
  10 in total

1.  Crystal structure of di-bromido-(N,N-di-methyl-formamide-κO){2-(1H-indol-3-yl)-N-[(quinolin-2-yl-κN)methyl-idene]ethanamine-κN}cadmium.

Authors:  Md Serajul Haque Faizi; Natalia O Sharkina; Yuliya M Davydenko
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2015-01-21

2.  Crystal structure of di-chlorido-{N (1)-phenyl-N (4)-[(quinolin-2-yl-κN)methylidene]benzene-1,4-diamine-κN (4)}mercury(II).

Authors:  Md Serajul Haque Faizi; Elena V Prisyazhnaya; Turganbay S Iskenderov
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2015-01-31

3.  Crystal structure of di-μ-chlorido-bis(chlorido-{N (1)-phenyl-N (4)-[(pyridin-2-yl-κN)methyl-idene]benzene-1,4-di-amine-κN (4)}mercury(II)).

Authors:  Md Serajul Haque Faizi; Elena V Prisyazhnaya
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2015-08-29

4.  Crystal structure of (E)-2-{[(4-anilinophen-yl)imino]-meth-yl}phenol.

Authors:  Md Serajul Haque Faizi; Turganbay S Iskenderov; Natalia O Sharkina
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2015-01-01

5.  Crystal structure of N (1),N (1)-diethyl-N (4)-[(quinolin-2-yl)methyl-idene]benzene-1,4-di-amine.

Authors:  Md Serajul Haque Faizi; Nazia Siddiqui; Saleem Javed
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2015-01-01

6.  Crystal structure of 2-{[(E)-(4-anilinophen-yl)iminium-yl]meth-yl}-5-(di-ethyl-amino)-phenolate.

Authors:  Md Serajul Haque Faizi; Kateryna A Ohui; Irina A Golenya
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2015-11-04

7.  Crystal structure of di-μ-chlorido-bis-(chlorido-{N1,N1-diethyl-N4-[(pyridin-2-yl-κN)methyl-idene]benzene-1,4-di-amine-κN4}mercury(II)).

Authors:  Md Serajul Haque Faizi; Necmi Dege; Kateryna Goleva
Journal:  Acta Crystallogr E Crystallogr Commun       Date:  2017-05-05

8.  Di-chlorido-(N,N-diethyl-4-{[(quinolin-2-yl)methyl-idene]amino-κ(2) N,N'}aniline)mercury(II).

Authors:  Md Serajul Haque Faizi; Sahid Hussain
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2014-05-03

9.  N (1)-[(1H-Imidazol-2-yl)methyl-idene]-N (4)-phenyl-benzene-1,4-di-amine.

Authors:  Md Serajul Haque Faizi; Ashraf Mashrai; M Shahid; Musheer Ahmad
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2014-06-25

10.  Crystal structure of N (1)-phenyl-N (4)-[(quinolin-2-yl)methyl-idene]benzene-1,4-di-amine.

Authors:  Md Serajul Haque Faizi; Ashraf Mashrai; Saleem Garandal; M Shahid
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2014-08-01
  10 in total

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