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Literature DB >> 24903193

Recent advances in DNA assembly technologies.

Ran Chao¹, Yongbo Yuan¹, Huimin Zhao^2,3.

Abstract

DNA assembly is one of the most important foundational technologies for synthetic biology and metabolic engineering. Since the development of the restriction digestion and ligation method in the early 1970s, a significant amount of effort has been devoted to developing better DNA assembly methods with higher efficiency, fidelity, and modularity, as well as simpler and faster protocols. This review will not only summarize the key DNA assembly methods and their recent applications, but also highlight the innovations in assembly schemes and the challenges in automating the DNA assembly methods. © FEMS 2015. All rights reserved. For permissions, please e-mail: journals.permission@oup.com.

Entities: Chemical Disease Species

Keywords: automation; genome synthesis; metabolic engineering; pathway construction; pathway optimization; synthetic biology

Mesh：

Substances：
DNA

Year: 2015 PMID： 24903193 PMCID： PMC4257898 DOI： 10.1111/1567-1364.12171

Source DB: PubMed Journal: FEMS Yeast Res ISSN： 1567-1356 Impact factor: 2.796

75 in total

1. Counter-selection facilitated plasmid construction by homologous recombination in Saccharomyces cerevisiae.

Authors: Peter Robert Anderson; Yousef Haj-Ahmad
Journal: Biotechniques Date: 2003-10 Impact factor: 1.993

2. Development of genetic circuitry exhibiting toggle switch or oscillatory behavior in Escherichia coli.

Authors: Mariette R Atkinson; Michael A Savageau; Jesse T Myers; Alexander J Ninfa
Journal: Cell Date: 2003-05-30 Impact factor: 41.582

3. USER cloning and USER fusion: the ideal cloning techniques for small and big laboratories.

Authors: Hussam H Nour-Eldin; Fernando Geu-Flores; Barbara A Halkier
Journal: Methods Mol Biol Date: 2010

Review 4. The second wave of synthetic biology: from modules to systems.

Authors: Priscilla E M Purnick; Ron Weiss
Journal: Nat Rev Mol Cell Biol Date: 2009-06 Impact factor: 94.444

5. j5 DNA assembly design automation software.

Authors: Nathan J Hillson; Rafael D Rosengarten; Jay D Keasling
Journal: ACS Synth Biol Date: 2011-12-20 Impact factor: 5.110

6. Creation of a bacterial cell controlled by a chemically synthesized genome.

Authors: Daniel G Gibson; John I Glass; Carole Lartigue; Vladimir N Noskov; Ray-Yuan Chuang; Mikkel A Algire; Gwynedd A Benders; Michael G Montague; Li Ma; Monzia M Moodie; Chuck Merryman; Sanjay Vashee; Radha Krishnakumar; Nacyra Assad-Garcia; Cynthia Andrews-Pfannkoch; Evgeniya A Denisova; Lei Young; Zhi-Qing Qi; Thomas H Segall-Shapiro; Christopher H Calvey; Prashanth P Parmar; Clyde A Hutchison; Hamilton O Smith; J Craig Venter
Journal: Science Date: 2010-05-20 Impact factor: 47.728

7. SLiCE: a novel bacterial cell extract-based DNA cloning method.

Authors: Yongwei Zhang; Uwe Werling; Winfried Edelmann
Journal: Nucleic Acids Res Date: 2012-01-12 Impact factor: 16.971

8. A survey of enabling technologies in synthetic biology.

Authors: Linda J Kahl; Drew Endy
Journal: J Biol Eng Date: 2013-05-10 Impact factor: 4.355

9. A one pot, one step, precision cloning method with high throughput capability.

Authors: Carola Engler; Romy Kandzia; Sylvestre Marillonnet
Journal: PLoS One Date: 2008-11-05 Impact factor: 3.240

10. Circular polymerase extension cloning of complex gene libraries and pathways.

Authors: Jiayuan Quan; Jingdong Tian
Journal: PLoS One Date: 2009-07-30 Impact factor: 3.240

37 in total

1. Accelerating the semisynthesis of alkaloid-based drugs through metabolic engineering.

Authors: Amy M Ehrenworth; Pamela Peralta-Yahya
Journal: Nat Chem Biol Date: 2017-02-15 Impact factor: 15.040

Review 2. Directed evolution combined with synthetic biology strategies expedite semi-rational engineering of genes and genomes.

Authors: Zhen Kang; Junli Zhang; Peng Jin; Sen Yang
Journal: Bioengineered Date: 2015-01-26 Impact factor: 3.269

Review 3. Metagenomics Approaches in Discovery and Development of New Bioactive Compounds from Marine Actinomycetes.

Authors: Gyana Prakash Mahapatra; Surabhi Raman; Suman Nayak; Sushanto Gouda; Gitishree Das; Jayanta Kumar Patra
Journal: Curr Microbiol Date: 2019-05-08 Impact factor: 2.188

4. Synthetic biology advances and applications in the biotechnology industry: a perspective.

Authors: Leonard Katz; Yvonne Y Chen; Ramon Gonzalez; Todd C Peterson; Huimin Zhao; Richard H Baltz
Journal: J Ind Microbiol Biotechnol Date: 2018-06-18 Impact factor: 3.346

5. Standardizing Automated DNA Assembly: Best Practices, Metrics, and Protocols Using Robots.

Authors: David I Walsh; Marilene Pavan; Luis Ortiz; Scott Wick; Johanna Bobrow; Nicholas J Guido; Sarah Leinicke; Dany Fu; Shreya Pandit; Lucy Qin; Peter A Carr; Douglas Densmore
Journal: SLAS Technol Date: 2019-02-15 Impact factor: 3.047

Review 6. Breaking the silence: new strategies for discovering novel natural products.

Authors: Hengqian Ren; Bin Wang; Huimin Zhao
Journal: Curr Opin Biotechnol Date: 2017-03-11 Impact factor: 9.740

7. PCR-Independent Method of Transformation-Associated Recombination Reveals the Cosmomycin Biosynthetic Gene Cluster in an Ocean Streptomycete.

Authors: Charles B Larson; Max Crüsemann; Bradley S Moore
Journal: J Nat Prod Date: 2017-03-23 Impact factor: 4.050