Literature DB >> 28333450

PCR-Independent Method of Transformation-Associated Recombination Reveals the Cosmomycin Biosynthetic Gene Cluster in an Ocean Streptomycete.

Charles B Larson1,2, Max Crüsemann1, Bradley S Moore1,3.   

Abstract

The transformation-associated recombination cloning methodology facilitates the genomic capture and heterologous expression of natural product biosynthetic gene clusters (BGCs). We have streamlined this procedure by introduction of synthetic DNA gene blocks for the efficient capture of BGCs. We show the successful capture and expression of the aromatic polyketide antitumor agent cosmomycin from streptomycete bacteria and the discovery of new cosmomycin analogues by mass spectral molecular networking.

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Year:  2017        PMID: 28333450      PMCID: PMC5714584          DOI: 10.1021/acs.jnatprod.6b01121

Source DB:  PubMed          Journal:  J Nat Prod        ISSN: 0163-3864            Impact factor:   4.050


  25 in total

Review 1.  Recent advances in the heterologous expression of microbial natural product biosynthetic pathways.

Authors:  Sarah E Ongley; Xiaoying Bian; Brett A Neilan; Rolf Müller
Journal:  Nat Prod Rep       Date:  2013-07-05       Impact factor: 13.423

Review 2.  Genomic basis for natural product biosynthetic diversity in the actinomycetes.

Authors:  Markus Nett; Haruo Ikeda; Bradley S Moore
Journal:  Nat Prod Rep       Date:  2009-09-01       Impact factor: 13.423

Review 3.  Neoglycorandomization and chemoenzymatic glycorandomization: two complementary tools for natural product diversification.

Authors:  Joseph M Langenhan; Byron R Griffith; Jon S Thorson
Journal:  J Nat Prod       Date:  2005-11       Impact factor: 4.050

Review 4.  Engineered biosynthesis of natural products in heterologous hosts.

Authors:  Yunzi Luo; Bing-Zhi Li; Duo Liu; Lu Zhang; Yan Chen; Bin Jia; Bo-Xuan Zeng; Huimin Zhao; Ying-Jin Yuan
Journal:  Chem Soc Rev       Date:  2015-05-11       Impact factor: 54.564

5.  DNA-binding properties of cosmomycin D, an anthracycline with two trisaccharide chains.

Authors:  Renata L A Furlan; Stephen J Watt; Leandro M Garrido; Gustavo P Amarante-Mendes; Mohammad Nur-e-alam; Jurgen Rohr; Alfredo Braña; Carmen Mendez; Jose A Salas; Margaret M Sheil; Jennifer L Beck; Gabriel Padilla
Journal:  J Antibiot (Tokyo)       Date:  2004-10       Impact factor: 2.649

Review 6.  Natural products: a continuing source of novel drug leads.

Authors:  Gordon M Cragg; David J Newman
Journal:  Biochim Biophys Acta       Date:  2013-02-18

7.  Glycogenomics as a mass spectrometry-guided genome-mining method for microbial glycosylated molecules.

Authors:  Roland D Kersten; Nadine Ziemert; David J Gonzalez; Brendan M Duggan; Victor Nizet; Pieter C Dorrestein; Bradley S Moore
Journal:  Proc Natl Acad Sci U S A       Date:  2013-11-04       Impact factor: 11.205

8.  Characterisation of anthracyclines from a cosmomycin D-producing species of Streptomyces by collisionally-activated dissociation and ion mobility mass spectrometry.

Authors:  Celine Kelso; Juan Diego Rojas; Renata L A Furlan; Gabriel Padilla; Jennifer L Beck
Journal:  Eur J Mass Spectrom (Chichester)       Date:  2009       Impact factor: 1.067

9.  Identification of Thiotetronic Acid Antibiotic Biosynthetic Pathways by Target-directed Genome Mining.

Authors:  Xiaoyu Tang; Jie Li; Natalie Millán-Aguiñaga; Jia Jia Zhang; Ellis C O'Neill; Juan A Ugalde; Paul R Jensen; Simone M Mantovani; Bradley S Moore
Journal:  ACS Chem Biol       Date:  2015-10-21       Impact factor: 5.100

10.  Tetarimycin A, an MRSA-active antibiotic identified through induced expression of environmental DNA gene clusters.

Authors:  Dimitris Kallifidas; Hahk-Soo Kang; Sean F Brady
Journal:  J Am Chem Soc       Date:  2012-11-27       Impact factor: 15.419

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  9 in total

Review 1.  Streptomycetes: Surrogate hosts for the genetic manipulation of biosynthetic gene clusters and production of natural products.

Authors:  Keshav K Nepal; Guojun Wang
Journal:  Biotechnol Adv       Date:  2018-10-09       Impact factor: 14.227

Review 2.  Heterologous expression-facilitated natural products' discovery in actinomycetes.

Authors:  Min Xu; Gerard D Wright
Journal:  J Ind Microbiol Biotechnol       Date:  2018-11-16       Impact factor: 3.346

3.  Direct cloning and heterologous expression of natural product biosynthetic gene clusters by transformation-associated recombination.

Authors:  Jia Jia Zhang; Kazuya Yamanaka; Xiaoyu Tang; Bradley S Moore
Journal:  Methods Enzymol       Date:  2019-03-21       Impact factor: 1.600

Review 4.  Genetic platforms for heterologous expression of microbial natural products.

Authors:  Jia Jia Zhang; Xiaoyu Tang; Bradley S Moore
Journal:  Nat Prod Rep       Date:  2019-06-14       Impact factor: 13.423

Review 5.  Novel bioactive natural products from bacteria via bioprospecting, genome mining and metabolic engineering.

Authors:  Olga N Sekurova; Olha Schneider; Sergey B Zotchev
Journal:  Microb Biotechnol       Date:  2019-03-04       Impact factor: 5.813

6.  CytA, a reductase in the cytorhodin biosynthesis pathway, inactivates anthracycline drugs in Streptomyces.

Authors:  Chun Gui; Jiang Chen; Qing Xie; Xuhua Mo; Shanwen Zhang; Hua Zhang; Junying Ma; Qinglian Li; Yu-Cheng Gu; Jianhua Ju
Journal:  Commun Biol       Date:  2019-12-06

Review 7.  Integrated Metabolomic-Genomic Workflows Accelerate Microbial Natural Product Discovery.

Authors:  Nicole E Avalon; Alison E Murray; Bill J Baker
Journal:  Anal Chem       Date:  2022-08-22       Impact factor: 8.008

Review 8.  Synthetic biology approaches to actinomycete strain improvement.

Authors:  Rainer Breitling; Martina Avbelj; Oksana Bilyk; Francesco Del Carratore; Alessandro Filisetti; Erik K R Hanko; Marianna Iorio; Rosario Pérez Redondo; Fernando Reyes; Michelle Rudden; Emmanuele Severi; Lucija Slemc; Kamila Schmidt; Dominic R Whittall; Stefano Donadio; Antonio Rodríguez García; Olga Genilloud; Gregor Kosec; Davide De Lucrezia; Hrvoje Petković; Gavin Thomas; Eriko Takano
Journal:  FEMS Microbiol Lett       Date:  2021-06-11       Impact factor: 2.742

Review 9.  Recent Advances in Strategies for the Cloning of Natural Product Biosynthetic Gene Clusters.

Authors:  Wenfang Wang; Guosong Zheng; Yinhua Lu
Journal:  Front Bioeng Biotechnol       Date:  2021-07-13
  9 in total

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