| Literature DB >> 24714162 |
Stephen Morris1, Saffron Karlsen1, Nancy Chung2, Melissa Hill3, Lyn S Chitty3.
Abstract
BACKGROUND: Non-invasive prenatal testing (NIPT) for Down's syndrome (DS) using cell free fetal DNA in maternal blood has the potential to dramatically alter the way prenatal screening and diagnosis is delivered. Before NIPT can be implemented into routine practice, information is required on its costs and benefits. We investigated the costs and outcomes of NIPT for DS as contingent testing and as first-line testing compared with the current DS screening programme in the UK National Health Service.Entities:
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Year: 2014 PMID: 24714162 PMCID: PMC3979704 DOI: 10.1371/journal.pone.0093559
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Key model inputs.
| Parameter | Value | Source/reference |
|
| ||
| Maternal age (%) | 0.0024–0.0165 by year of maternalage from ≤13 years to ≥50 years |
|
| Prevalence of Down’s syndrome (%) | 0.1–2.6 by gestational week and maternal age |
|
| Screening late arrivals (%) | 15 |
|
| Screening uptake (%) | 69 |
|
| Screening test performance (DR [%]; FPR [%]) | ||
| Combined test with screening riskcut-off of 1 in | ||
| 150 | 85.0; 2.5 |
|
| 500 | 94.0; 7.0 | |
| 1000 | 96.0; 12.0 | |
| 2000 | 98.0; 19.0 | |
| Quadruple free β-hCG test | 80.5; 4.0 |
|
| Weekly spontaneous fetal loss (%) | ||
| DS affected pregnancies | 0.5–7.1 by gestational week |
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| Unaffected pregnancies | 0.04–0.07 by maternal age |
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| NT measurement failures (%) | 14–19 by gestational week |
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| Invasive diagnostic test uptake (%) | ||
| Unaffected pregnancies | 80 |
|
| DS pregnancies | 90 |
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| Invasive diagnostic test performance (DR [%];sample failure rate [%]; procedural miscarriage rate [%]) | ||
| CVS/QF-PCR | 100; 1.3; 0.5 |
|
| Amniocentesis/full karyotyping | 100; 0.8; 0.5 |
|
| TOP uptake (%) | 92.1 |
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| Live birth outcomes (%) | ||
| Vaginal live birth | 75.2 |
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| Caesarean live birth | 24.8 |
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| Costs of screening | ||
| Combined test | 27 |
|
| Quadruple free β-hCG test | 35 |
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| Cost invasive diagnostic test (£) | ||
| CVS/QF-PCR | 479 |
|
| Amniocentesis/full karyotyping | 479 |
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| Cost fetal loss (£) | ||
| Spontaneous | 511 |
|
| Due to CVS or amniocentesis | 511 |
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| Cost TOP (£) | ||
| First trimester | 697 |
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| Second trimester | 882 |
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| Cost live birth outcomes (£) | ||
| Vaginal live birth | 1,341 |
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| Caesarean live birth | 2,436 |
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| Uptake of NIPT (%) | ||
| As contingent testing | ||
| Base case | ||
| Unaffected pregnancies | 80 | Assumption |
| DS pregnancies | 90 | Assumption |
| Alternative scenario | 100 | Assumption |
| Alternative scenario | 100 | Assumption |
| As first-line screening | ||
| Base case | 69 | Assumption |
| Alternative scenario | 79 | Assumption |
| NIPT performance (DR [%]; FPR [%]; sample failure rate [%]; procedural miscarriage rate [%]) | 99; 1; 5; 0 | Assumption based on |
| Cost of NIPT | 50, 250, 500, 750 | Assumption |
| Cost of taking blood sample | 3 |
|
*For both unaffected and DS affected pregnancies.
**As for invasive diagnostic tests.
***As for DS screening. DS = Down’s syndrome; NT = nuchal translucency; CVS = chorionic villus sampling; QF-PCR = Quantitative Fluorescence Polymerase Chain Reaction; TOP = termination of pregnancy; DR = detection rate; FPR = false positive rate
Figure 1First trimester screening pathway: current DS screening.
DS = Down’s syndrome; NT = nuchal translucency; CVS = chorionic villus sampling; QF-PCR = Quantitative Fluorescence Polymerase Chain Reaction; TOP = termination of pregnancy. See Figure S1 in Supporting Information for the second trimester screening pathway.
Figure 2First trimester screening pathway: NIPT as contingent testing.
DS = Down’s syndrome; NT = nuchal translucency; NIPT = non-invasive prenatal testing; CVS = chorionic villus sampling; QF-PCR = Quantitative Fluorescence Polymerase Chain Reaction; TOP = termination of pregnancy. See Figure S2 in Supporting Information for the second trimester screening pathway.
Figure 3NIPT as first-line testing.
DS = Down’s syndrome; NT = nuchal translucency; NIPT = non-invasive prenatal testing; CVS = chorionic villus sampling; QF-PCR = Quantitative Fluorescence Polymerase Chain Reaction; TOP = termination of pregnancy.
Sensitivity and specificity of NIPT for Down’s syndrome: results from eight studies.
| Sequencing approach | Test results | Sensitivity | Specificity | ||||||
| TP | FN | TN | FP | % | 95% CI (%) | % | 95% CI (%) | ||
| Enrich et al 2011 | Whole genome | 39 | 0 | 410 | 1 | 100 | 89–100 | 99.7 | 98.5–99.9 |
| Palomaki et al 2011 | Whole genome | 212 | 3 | 1471 | 3 | 98.6 | 98.6–99.5 | 99.8 | 99.4–99.9 |
| Bianchi et al 2012 | Whole genome | 89 | 0 | 404 | 0 | 100 | 95.9–100 | 100 | 99.1–100 |
| Ashoor et al 2012 | Targeted | 50 | 0 | 297 | 0 | 100 | 92.1–100 | 100 | 98.7–100 |
| Sparks et al 2012 | Targeted | 36 | 0 | 123 | 0 | 100 | 90.4–100 | 100 | 97.0–100 |
| Norton et al 2012 | Targeted | 81 | 0 | 2888 | 1 | 100 | 95.5–99.65 | 99.97 | 99.8–99.99 |
| Futch et al 2013 | Whole genome | 154 | 2 | 5515 | 1 | 98.72 | 95.45–99.65 | 99.98 | 99.9–100 |
| Liang et al 2013 | Whole genome | 40 | 0 | 372 | 0 | 100 | 91.24–100 | 100 | 98.98–100 |
|
| 736 | 5 | 11601 | 6 | 99.33 | 98.43–99.71 | 99.94 | 99.88–99.97 | |
*Calculated using the Fetal-fraction Optimized Risk of Trisomy Evaluation (FORTE) algorithm. TP = number of true positive results; FN = number of false negative results; TN = number of true negative results; FP = number of false positive result.
Outcomes of testing strategies in a screening population of 10,000 pregnant women.
| Testing strategy | Screening riskcut-off (1 in) | Number undergoing screening | Number undergoing NIPT | Number with apositive NIPT result | Number having an invasivediagnostic test | Number ofprocedure-relatedmiscarriages | Number of DS cases detected |
| DS screening using the combined test | 150s | 6,881.66 | 0 | 160.59 | 0.80 | 13.24 | |
| NIPT as contingent testing | 150 | 6,881.66 | 153.75 | 13.30 | 11.48 | 0.06 | 11.26 |
| 500 | 6,881.66 | 361.43 | 14.75 | 12.71 | 0.06 | 12.31 | |
| 1,000 | 6,881.66 | 591.02 | 15.26 | 13.13 | 0.07 | 12.55 | |
| 2,000 | 6,881.66 | 912.32 | 15.85 | 13.63 | 0.07 | 12.78 | |
| NIPT as first-line screening | 0 | 6,881.66 | 28.02 | 22.03 | 0.11 | 16.49 |
69% uptake of DS screening using the combined test. 80% uptake of NIPT as contingent screening for unaffected pregnancies and 90% for affected pregnancies. 69% uptake of NIPT as first-line screening.
DS = Down’s Syndrome; NIPT = non-invasive prenatal testing.
Costs of testing strategies in a screening population of 10,000 pregnant women.
| Testing strategy | Screening riskcut-off (1 in) | Cost per NIPT test | (A) Cost of screening (£000s) | (B) Cost ofNIPT (£000s) | (C) Cost of invasive diagnostic tests (£000s) | (A)+ (B)+ (C) (£000s) |
| DS screening using the combinedtest | 150 | 200 | 0 | 79 | 279 | |
| NIPT as contingent testing | 150 | £50 | 200 | 8 | 6 | 213 |
| 150 | £250 | 200 | 39 | 6 | 244 | |
| 150 | £500 | 200 | 78 | 6 | 283 | |
| 150 | £750 | 200 | 116 | 6 | 322 | |
| 500 | £50 | 200 | 18 | 6 | 225 | |
| 500 | £250 | 200 | 91 | 6 | 298 | |
| 500 | £500 | 200 | 183 | 6 | 389 | |
| 500 | £750 | 200 | 274 | 6 | 480 | |
| 1,000 | £50 | 200 | 30 | 6 | 237 | |
| 1,000 | £250 | 200 | 149 | 6 | 356 | |
| 1,000 | £500 | 200 | 298 | 6 | 505 | |
| 1,000 | £750 | 200 | 448 | 6 | 655 | |
| 2,000 | £50 | 200 | 46 | 7 | 253 | |
| 2,000 | £250 | 200 | 230 | 7 | 438 | |
| 2,000 | £500 | 200 | 461 | 7 | 668 | |
| 2,000 | £750 | 200 | 691 | 7 | 898 | |
| NIPT as first-line screening | £50 | 0 | 438 | 11 | 449 | |
| £250 | 0 | 1,642 | 11 | 1,825 | ||
| £500 | 0 | 3,535 | 11 | 3,546 | ||
| £750 | 0 | 5,255 | 11 | 5,266 |
69% uptake of DS screening using the combined test. 80% uptake of NIPT as contingent screening for unaffected pregnancies and 90% for affected.
pregnancies. 69% uptake of NIPT as first-line screening.
*Including procedural miscarriages. DS = Down’s syndrome; NIPT = non-invasive prenatal testing