Literature DB >> 2454454

The molecular structure of hop latent viroid (HLV), a new viroid occurring worldwide in hops.

H Puchta1, K Ramm, H L Sänger.   

Abstract

A new viroid which does not seem to produce any symptoms of disease, and is therefore tentatively named hop latent viroid (HLV) was found to occur worldwide in hops. HLV proved to be infectious when mechanically inoculated onto viroid- and virus-free hops. The viroid nature of HLV was also substantiated by sequence analysis which revealed that HLV is a circular RNA consisting of 256 nucleotides, that can be arranged into the viroid-specific, rod-like secondary structure. HLV also contains the central conserved region typical for most of the presently known viroids. However HLV does not contain the viroid-specific oligo(A) stretch in the upper left part of its rod-like molecule. Because of this feature and a sequence similarity with the prototypes of the other viroid groups below 55%, HLV can be regarded as the first member of a new viroid group.

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Year:  1988        PMID: 2454454      PMCID: PMC336624          DOI: 10.1093/nar/16.10.4197

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  22 in total

1.  Sensitive and rapid diagnosis of potato spindle tuber viroid disease by nucleic Acid hybridization.

Authors:  R A Owens; T O Diener
Journal:  Science       Date:  1981-08-07       Impact factor: 47.728

2.  Nucleotide sequence of a hop stunt viroid isolate from the German grapevine cultivar 'Riesling'.

Authors:  H Puchta; K Ramm; H L Sänger
Journal:  Nucleic Acids Res       Date:  1988-03-25       Impact factor: 16.971

3.  Self-cleavage of virusoid RNA is performed by the proposed 55-nucleotide active site.

Authors:  A C Forster; R H Symons
Journal:  Cell       Date:  1987-07-03       Impact factor: 41.582

4.  Structure and structure formation of viroids.

Authors:  D Riesner; K Henco; U Rokohl; G Klotz; A K Kleinschmidt; H Domdey; P Jank; H J Gross; H L Sänger
Journal:  J Mol Biol       Date:  1979-09-05       Impact factor: 5.469

5.  Large-scale purification of viroid RNA using Cs2SO4 gradient centrifugation and high-performance liquid chromatography.

Authors:  M Colpan; J Schumacher; W Brüggemann; H L Sänger; D Riesner
Journal:  Anal Biochem       Date:  1983-05       Impact factor: 3.365

6.  Synthesis of (+) and (-) RNA molecules of potato spindle tuber viroid (PSTV) in isolated nuclei and its impairment by transcription inhibitors.

Authors:  E Spiesmacher; H P Mühlbach; M Tabler; H L Sänger
Journal:  Biosci Rep       Date:  1985-03       Impact factor: 3.840

7.  Nucleotide sequence and secondary structure of apple scar skin viroid.

Authors:  J Hashimoto; H Koganezawa
Journal:  Nucleic Acids Res       Date:  1987-09-11       Impact factor: 16.971

8.  Avocado sunblotch viroid: primary sequence and proposed secondary structure.

Authors:  R H Symons
Journal:  Nucleic Acids Res       Date:  1981-12-11       Impact factor: 16.971

9.  Hop stunt viroid: molecular cloning and nucleotide sequence of the complete cDNA copy.

Authors:  T Ohno; N Takamatsu; T Meshi; Y Okada
Journal:  Nucleic Acids Res       Date:  1983-09-24       Impact factor: 16.971

10.  Correlation between structure and pathogenicity of potato spindle tuber viroid (PSTV).

Authors:  M Schnölzer; B Haas; K Raam; H Hofmann; H L Sänger
Journal:  EMBO J       Date:  1985-09       Impact factor: 11.598

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  22 in total

1.  A new strain of potato spindle tuber viroid (PSTVd-N) exhibits major sequence differences as compared to all other PSTVd strains sequenced so far.

Authors:  H Puchta; T Herold; K Verhoeven; A Roenhorst; K Ramm; W Schmidt-Puchta; H L Sänger
Journal:  Plant Mol Biol       Date:  1990-09       Impact factor: 4.076

2.  Sequence analysis of five new field isolates demonstrates that the chain length of potato spindle tuber viroid (PSTVd) is not strictly conserved but as variable as in other viroids.

Authors:  T Herold; B Haas; R P Singh; A Boucher; H L Sänger
Journal:  Plant Mol Biol       Date:  1992-05       Impact factor: 4.076

3.  Phylogeny of viroids, viroidlike satellite RNAs, and the viroidlike domain of hepatitis delta virus RNA.

Authors:  S F Elena; J Dopazo; R Flores; T O Diener; A Moya
Journal:  Proc Natl Acad Sci U S A       Date:  1991-07-01       Impact factor: 11.205

4.  Primary and secondary structure of citrus viroid IV (CVd IV), a new chimeric viroid present in dwarfed grapefruit in Israel.

Authors:  H Puchta; K Ramm; R Luckinger; R Hadas; M Bar-Joseph; H L Snger
Journal:  Nucleic Acids Res       Date:  1991-12-11       Impact factor: 16.971

5.  Compilation and analysis of viroid and viroid-like RNA sequences.

Authors:  F Bussière; D Lafontaine; J P Perreault
Journal:  Nucleic Acids Res       Date:  1996-05-15       Impact factor: 16.971

6.  An improved procedure for the rapid one-step-cloning of full-length viroid cDNA.

Authors:  H Puchta; H L Sänger
Journal:  Arch Virol       Date:  1988       Impact factor: 2.574

7.  Sequence analysis of minute amounts of viroid RNA using the polymerase chain reaction (PCR). Rapid communication.

Authors:  H Puchta; H L Sänger
Journal:  Arch Virol       Date:  1989       Impact factor: 2.574

8.  A viroid from Brunfelsia undulata closely related to the Columnea latent viroid.

Authors:  R L Spieker
Journal:  Arch Virol       Date:  1996       Impact factor: 2.574

9.  A viroid from Solanum pseudocapsicum closely related to the tomato apical stunt viroid.

Authors:  R L Spieker; S Marinkovic; H L Sänger
Journal:  Arch Virol       Date:  1996       Impact factor: 2.574

10.  A new sequence variant of Coleus blumei viroid 3 from the Coleus blumei cultivar 'Fairway Ruby'.

Authors:  R L Spieker; S Marinkovic; H L Sänger
Journal:  Arch Virol       Date:  1996       Impact factor: 2.574

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