Literature DB >> 24492710

Genomic imprinting in mammals.

Denise P Barlow1, Marisa S Bartolomei.   

Abstract

Genomic imprinting affects a subset of genes in mammals and results in a monoallelic, parental-specific expression pattern. Most of these genes are located in clusters that are regulated through the use of insulators or long noncoding RNAs (lncRNAs). To distinguish the parental alleles, imprinted genes are epigenetically marked in gametes at imprinting control elements through the use of DNA methylation at the very least. Imprinted gene expression is subsequently conferred through lncRNAs, histone modifications, insulators, and higher-order chromatin structure. Such imprints are maintained after fertilization through these mechanisms despite extensive reprogramming of the mammalian genome. Genomic imprinting is an excellent model for understanding mammalian epigenetic regulation.

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Year:  2014        PMID: 24492710      PMCID: PMC3941233          DOI: 10.1101/cshperspect.a018382

Source DB:  PubMed          Journal:  Cold Spring Harb Perspect Biol        ISSN: 1943-0264            Impact factor:   10.005


  105 in total

1.  Deletion of a silencer element in Igf2 results in loss of imprinting independent of H19.

Authors:  M Constância; W Dean; S Lopes; T Moore; G Kelsey; W Reik
Journal:  Nat Genet       Date:  2000-10       Impact factor: 38.330

Review 2.  Epigenetic reprogramming in mammals.

Authors:  Hugh D Morgan; Fátima Santos; Kelly Green; Wendy Dean; Wolf Reik
Journal:  Hum Mol Genet       Date:  2005-04-15       Impact factor: 6.150

3.  RNAi-mediated allelic trans-interaction at the imprinted Rtl1/Peg11 locus.

Authors:  Erica Davis; Florian Caiment; Xavier Tordoir; Jérôme Cavaillé; Anne Ferguson-Smith; Noelle Cockett; Michel Georges; Carole Charlier
Journal:  Curr Biol       Date:  2005-04-26       Impact factor: 10.834

4.  The long noncoding RNA Kcnq1ot1 organises a lineage-specific nuclear domain for epigenetic gene silencing.

Authors:  Lisa Redrup; Miguel R Branco; Elizabeth R Perdeaux; Christel Krueger; Annabelle Lewis; Fátima Santos; Takashi Nagano; Bradley S Cobb; Peter Fraser; Wolf Reik
Journal:  Development       Date:  2009-01-14       Impact factor: 6.868

Review 5.  lncRNAs: linking RNA to chromatin.

Authors:  John L Rinn
Journal:  Cold Spring Harb Perspect Biol       Date:  2014-08-01       Impact factor: 10.005

6.  Multiple imprinted sense and antisense transcripts, differential methylation and tandem repeats in a putative imprinting control region upstream of mouse Igf2.

Authors:  T Moore; M Constancia; M Zubair; B Bailleul; R Feil; H Sasaki; W Reik
Journal:  Proc Natl Acad Sci U S A       Date:  1997-11-11       Impact factor: 11.205

7.  A GNAS1 imprinting defect in pseudohypoparathyroidism type IB.

Authors:  J Liu; D Litman; M J Rosenberg; S Yu; L G Biesecker; L S Weinstein
Journal:  J Clin Invest       Date:  2000-11       Impact factor: 14.808

8.  The mouse insulin-like growth factor type-2 receptor is imprinted and closely linked to the Tme locus.

Authors:  D P Barlow; R Stöger; B G Herrmann; K Saito; N Schweifer
Journal:  Nature       Date:  1991-01-03       Impact factor: 49.962

9.  Parental imprinting: potentially active chromatin of the repressed maternal allele of the mouse insulin-like growth factor II (Igf2) gene.

Authors:  H Sasaki; P A Jones; J R Chaillet; A C Ferguson-Smith; S C Barton; W Reik; M A Surani
Journal:  Genes Dev       Date:  1992-10       Impact factor: 11.361

10.  A downstream CpG island controls transcript initiation and elongation and the methylation state of the imprinted Airn macro ncRNA promoter.

Authors:  Martha V Koerner; Florian M Pauler; Quanah J Hudson; Federica Santoro; Anna Sawicka; Philipp M Guenzl; Stefan H Stricker; Yvonne M Schichl; Paulina A Latos; Ruth M Klement; Katarzyna E Warczok; Jacek Wojciechowski; Christian Seiser; Robert Kralovics; Denise P Barlow
Journal:  PLoS Genet       Date:  2012-03-01       Impact factor: 5.917

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  245 in total

Review 1.  Long-Range Chromatin Interactions.

Authors:  Job Dekker; Tom Misteli
Journal:  Cold Spring Harb Perspect Biol       Date:  2015-10-01       Impact factor: 10.005

2.  Xist imprinting is promoted by the hemizygous (unpaired) state in the male germ line.

Authors:  Sha Sun; Bernhard Payer; Satoshi Namekawa; Jee Young An; William Press; Jovani Catalan-Dibene; Hongjae Sunwoo; Jeannie T Lee
Journal:  Proc Natl Acad Sci U S A       Date:  2015-10-21       Impact factor: 11.205

Review 3.  Evolution of vertebrate sex chromosomes and dosage compensation.

Authors:  Jennifer A Marshall Graves
Journal:  Nat Rev Genet       Date:  2015-11-30       Impact factor: 53.242

Review 4.  Unique features of long non-coding RNA biogenesis and function.

Authors:  Jeffrey J Quinn; Howard Y Chang
Journal:  Nat Rev Genet       Date:  2016-01       Impact factor: 53.242

Review 5.  Characters, functions and clinical perspectives of long non-coding RNAs.

Authors:  Ruifang Wu; Yuwen Su; Haijing Wu; Yong Dai; Ming Zhao; Qianjin Lu
Journal:  Mol Genet Genomics       Date:  2016-02-17       Impact factor: 3.291

6.  Evolution patterns of Peg3 and H19-ICR.

Authors:  Joomyeong Kim
Journal:  Genomics       Date:  2018-11-29       Impact factor: 5.736

Review 7.  The genetic basis of disease.

Authors:  Maria Jackson; Leah Marks; Gerhard H W May; Joanna B Wilson
Journal:  Essays Biochem       Date:  2018-12-02       Impact factor: 8.000

8.  DNA methylation of imprinted genes in Mexican-American newborn children with prenatal phthalate exposure.

Authors:  Gwen Tindula; Susan K Murphy; Carole Grenier; Zhiqing Huang; Karen Huen; Maria Escudero-Fung; Asa Bradman; Brenda Eskenazi; Cathrine Hoyo; Nina Holland
Journal:  Epigenomics       Date:  2018-06-29       Impact factor: 4.778

Review 9.  Epigenetic Determinants of Cancer.

Authors:  Stephen B Baylin; Peter A Jones
Journal:  Cold Spring Harb Perspect Biol       Date:  2016-09-01       Impact factor: 10.005

Review 10.  DLK1-DIO3 imprinted cluster in induced pluripotency: landscape in the mist.

Authors:  Leonidas Benetatos; George Vartholomatos; Eleftheria Hatzimichael
Journal:  Cell Mol Life Sci       Date:  2014-08-07       Impact factor: 9.261

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