Literature DB >> 24351723

Slicing tRNAs to boost functional ncRNA diversity.

Jennifer Gebetsberger1, Norbert Polacek2.   

Abstract

Post-transcriptional cleavage of RNA molecules to generate smaller fragments is a widespread mechanism that enlarges the structural and functional complexity of cellular RNomes. Substrates for such RNA fragmentations are coding as well as non-protein-coding RNAs. In particular, fragments derived from both precursor and mature tRNAs represent one of the rapidly growing classes of post-transcriptional RNA pieces. Importantly, these tRNA fragments possess distinct expression patterns, abundance, cellular localizations, or biological roles compared with their parental tRNA molecules. Here we review recent reports on tRNA cleavage and attempt to categorize tRNA pieces according to their origin and cellular function. The biological scope of tRNA-derived fragments ranges from translation control, over RNA silencing, to regulating apoptosis, and thus clearly enlarges the functional repertoire of ncRNA biology.

Entities:  

Keywords:  RNA fragmentation; RNA processing; RNA silencing; non-coding RNA; tRNA halves; tRNA-derived fragments; translation regulation

Mesh:

Substances:

Year:  2013        PMID: 24351723      PMCID: PMC3917982          DOI: 10.4161/rna.27177

Source DB:  PubMed          Journal:  RNA Biol        ISSN: 1547-6286            Impact factor:   4.652


  85 in total

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8.  Pyrosequencing of small non-coding RNAs in HIV-1 infected cells: evidence for the processing of a viral-cellular double-stranded RNA hybrid.

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Review 9.  Small RNAs in transcriptional gene silencing and genome defence.

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  123 in total

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Review 9.  Controlling translation via modulation of tRNA levels.

Authors:  Jeremy E Wilusz
Journal:  Wiley Interdiscip Rev RNA       Date:  2015-04-28       Impact factor: 9.957

10.  Growth-regulating Mycobacterium tuberculosis VapC-mt4 toxin is an isoacceptor-specific tRNase.

Authors:  Jonathan W Cruz; Jared D Sharp; Eric D Hoffer; Tatsuya Maehigashi; Irina O Vvedenskaya; Arvind Konkimalla; Robert N Husson; Bryce E Nickels; Christine M Dunham; Nancy A Woychik
Journal:  Nat Commun       Date:  2015-07-09       Impact factor: 14.919

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