Literature DB >> 15851066

Non-coding RNAs: hope or hype?

Alexander Hüttenhofer1, Peter Schattner, Norbert Polacek.   

Abstract

The past four years have seen an explosion in the number of detected RNA transcripts with no apparent protein-coding potential. This has led to speculation that non-protein-coding RNAs (ncRNAs) might be as important as proteins in the regulation of vital cellular functions. However, there has been significantly less progress in actually demonstrating the functions of these transcripts. In this article, we review the results of recent experiments that show that transcription of non-protein-coding RNA is far more widespread than was previously anticipated. Although some ncRNAs act as molecular switches that regulate gene expression, the function of many ncRNAs is unknown. New experimental and computational approaches are emerging that will help determine whether these newly identified transcription products are evidence of important new biochemical pathways or are merely 'junk' RNA generated by the cell as a by-product of its functional activities.

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Year:  2005        PMID: 15851066     DOI: 10.1016/j.tig.2005.03.007

Source DB:  PubMed          Journal:  Trends Genet        ISSN: 0168-9525            Impact factor:   11.639


  160 in total

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2.  RNAspace.org: An integrated environment for the prediction, annotation, and analysis of ncRNA.

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Journal:  RNA       Date:  2011-09-23       Impact factor: 4.942

3.  Top-down mass spectrometry for sequencing of larger (up to 61 nt) RNA by CAD and EDD.

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4.  Understanding the kinetic mechanism of RNA single base pair formation.

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Journal:  Proc Natl Acad Sci U S A       Date:  2015-12-22       Impact factor: 11.205

5.  Regulation of an intergenic transcript controls adjacent gene transcription in Saccharomyces cerevisiae.

Authors:  Joseph A Martens; Pei-Yun Jenny Wu; Fred Winston
Journal:  Genes Dev       Date:  2005-11-15       Impact factor: 11.361

Review 6.  Mass spectrometry of RNA: linking the genome to the proteome.

Authors:  Zhaojing Meng; Patrick A Limbach
Journal:  Brief Funct Genomic Proteomic       Date:  2006-02-27

Review 7.  Treasure hunt in an amoeba: non-coding RNAs in Dictyostelium discoideum.

Authors:  Andrea Hinas; Fredrik Söderbom
Journal:  Curr Genet       Date:  2007-03       Impact factor: 3.886

8.  Identification of a large noncoding RNA in extremophilic eubacteria.

Authors:  Elena Puerta-Fernandez; Jeffrey E Barrick; Adam Roth; Ronald R Breaker
Journal:  Proc Natl Acad Sci U S A       Date:  2006-12-12       Impact factor: 11.205

9.  Histone H3 acetylation and H3 K4 methylation define distinct chromatin regions permissive for transgene expression.

Authors:  Chunhong Yan; Douglas D Boyd
Journal:  Mol Cell Biol       Date:  2006-09       Impact factor: 4.272

Review 10.  The involvement of microRNAs in major depression, suicidal behavior, and related disorders: a focus on miR-185 and miR-491-3p.

Authors:  Gianluca Serafini; Maurizio Pompili; Katelin F Hansen; Karl Obrietan; Yogesh Dwivedi; Noam Shomron; Paolo Girardi
Journal:  Cell Mol Neurobiol       Date:  2013-11-09       Impact factor: 5.046

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