Literature DB >> 24317284

A synthetic DNA motor that transports nanoparticles along carbon nanotubes.

Tae-Gon Cha1, Jing Pan1, Haorong Chen1, Janette Salgado1, Xiang Li2, Chengde Mao2, Jong Hyun Choi1.   

Abstract

Intracellular protein motors have evolved to perform specific tasks critical to the function of cells such as intracellular trafficking and cell division. Kinesin and dynein motors, for example, transport cargoes in living cells by walking along microtubules powered by adenosine triphosphate hydrolysis. These motors can make discrete 8 nm centre-of-mass steps and can travel over 1 µm by changing their conformations during the course of adenosine triphosphate binding, hydrolysis and product release. Inspired by such biological machines, synthetic analogues have been developed including self-assembled DNA walkers that can make stepwise movements on RNA/DNA substrates or can function as programmable assembly lines. Here, we show that motors based on RNA-cleaving DNA enzymes can transport nanoparticle cargoes-CdS nanocrystals in this case-along single-walled carbon nanotubes. Our motors extract chemical energy from RNA molecules decorated on the nanotubes and use that energy to fuel autonomous, processive walking through a series of conformational changes along the one-dimensional track. The walking is controllable and adapts to changes in the local environment, which allows us to remotely direct 'go' and 'stop' actions. The translocation of individual motors can be visualized in real time using the visible fluorescence of the cargo nanoparticle and the near-infared emission of the carbon-nanotube track. We observed unidirectional movements of the molecular motors over 3 µm with a translocation velocity on the order of 1 nm min(-1) under our experimental conditions.

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Year:  2013        PMID: 24317284     DOI: 10.1038/nnano.2013.257

Source DB:  PubMed          Journal:  Nat Nanotechnol        ISSN: 1748-3387            Impact factor:   39.213


  29 in total

Review 1.  The molecular motor toolbox for intracellular transport.

Authors:  Ronald D Vale
Journal:  Cell       Date:  2003-02-21       Impact factor: 41.582

2.  Structure-assigned optical spectra of single-walled carbon nanotubes.

Authors:  Sergei M Bachilo; Michael S Strano; Carter Kittrell; Robert H Hauge; Richard E Smalley; R Bruce Weisman
Journal:  Science       Date:  2002-11-29       Impact factor: 47.728

3.  Diffusion dynamics of glycine receptors revealed by single-quantum dot tracking.

Authors:  Maxime Dahan; Sabine Lévi; Camilla Luccardini; Philippe Rostaing; Béatrice Riveau; Antoine Triller
Journal:  Science       Date:  2003-10-17       Impact factor: 47.728

4.  Kinesin walks hand-over-hand.

Authors:  Ahmet Yildiz; Michio Tomishige; Ronald D Vale; Paul R Selvin
Journal:  Science       Date:  2003-12-18       Impact factor: 47.728

5.  The use of nanocrystals in biological detection.

Authors:  Paul Alivisatos
Journal:  Nat Biotechnol       Date:  2004-01       Impact factor: 54.908

6.  Programming biomolecular self-assembly pathways.

Authors:  Peng Yin; Harry M T Choi; Colby R Calvert; Niles A Pierce
Journal:  Nature       Date:  2008-01-17       Impact factor: 49.962

7.  Direct observation of stepwise movement of a synthetic molecular transporter.

Authors:  Shelley F J Wickham; Masayuki Endo; Yousuke Katsuda; Kumi Hidaka; Jonathan Bath; Hiroshi Sugiyama; Andrew J Turberfield
Journal:  Nat Nanotechnol       Date:  2011-02-06       Impact factor: 39.213

8.  Bead movement by single kinesin molecules studied with optical tweezers.

Authors:  S M Block; L S Goldstein; B J Schnapp
Journal:  Nature       Date:  1990-11-22       Impact factor: 49.962

9.  A general purpose RNA-cleaving DNA enzyme.

Authors:  S W Santoro; G F Joyce
Journal:  Proc Natl Acad Sci U S A       Date:  1997-04-29       Impact factor: 11.205

10.  Autonomous multistep organic synthesis in a single isothermal solution mediated by a DNA walker.

Authors:  Yu He; David R Liu
Journal:  Nat Nanotechnol       Date:  2010-10-10       Impact factor: 39.213

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  45 in total

1.  Unidirectional rotary motion in achiral molecular motors.

Authors:  Jos C M Kistemaker; Peter Štacko; Johan Visser; Ben L Feringa
Journal:  Nat Chem       Date:  2015-10-12       Impact factor: 24.427

2.  Molecular motors: on track with nanotubes.

Authors:  Anand Jagota
Journal:  Nat Nanotechnol       Date:  2014-01       Impact factor: 39.213

3.  DNA Walker-Regulated Cancer Cell Growth Inhibition.

Authors:  Feiran Li; Tae-Gon Cha; Jing Pan; Altug Ozcelikkale; Bumsoo Han; Jong Hyun Choi
Journal:  Chembiochem       Date:  2016-04-28       Impact factor: 3.164

Review 4.  From isolated structures to continuous networks: A categorization of cytoskeleton-based motile engineered biological microstructures.

Authors:  Rachel Andorfer; Joshua D Alper
Journal:  Wiley Interdiscip Rev Nanomed Nanobiotechnol       Date:  2019-02-11

Review 5.  Bioapplications of DNA nanotechnology at the solid-liquid interface.

Authors:  Wenjing Wang; Sha Yu; Shan Huang; Sai Bi; Heyou Han; Jian-Rong Zhang; Yi Lu; Jun-Jie Zhu
Journal:  Chem Soc Rev       Date:  2019-09-16       Impact factor: 54.564

6.  Tunable DNA Origami Motors Translocate Ballistically Over μm Distances at nm/s Speeds.

Authors:  Alisina Bazrafshan; Travis A Meyer; Hanquan Su; Joshua M Brockman; Aaron T Blanchard; Selma Piranej; Yuxin Duan; Yonggang Ke; Khalid Salaita
Journal:  Angew Chem Int Ed Engl       Date:  2020-04-01       Impact factor: 15.336

Review 7.  Synthetic biology approaches to dissecting linear motor protein function: towards the design and synthesis of artificial autonomous protein walkers.

Authors:  Heiner Linke; Birte Höcker; Ken'ya Furuta; Nancy R Forde; Paul M G Curmi
Journal:  Biophys Rev       Date:  2020-07-10

8.  Imaging Endogenous Metal Ions in Living Cells Using a DNAzyme-Catalytic Hairpin Assembly Probe.

Authors:  Zhenkun Wu; Huanhuan Fan; Nitya Sai Reddy Satyavolu; WenJing Wang; Ryan Lake; Jian-Hui Jiang; Yi Lu
Journal:  Angew Chem Int Ed Engl       Date:  2017-06-23       Impact factor: 15.336

9.  Nanowired Bioelectric Interfaces.

Authors:  Bozhi Tian; Charles M Lieber
Journal:  Chem Rev       Date:  2019-04-17       Impact factor: 60.622

Review 10.  Single-molecule tools for enzymology, structural biology, systems biology and nanotechnology: an update.

Authors:  Julia R Widom; Soma Dhakal; Laurie A Heinicke; Nils G Walter
Journal:  Arch Toxicol       Date:  2014-09-12       Impact factor: 5.153

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