Literature DB >> 32017312

Tunable DNA Origami Motors Translocate Ballistically Over μm Distances at nm/s Speeds.

Alisina Bazrafshan1, Travis A Meyer2, Hanquan Su1, Joshua M Brockman2, Aaron T Blanchard2, Selma Piranej1, Yuxin Duan1, Yonggang Ke1,2, Khalid Salaita1,2.   

Abstract

Inspired by biological motor proteins, that efficiently convert chemical fuel to unidirectional motion, there has been considerable interest in developing synthetic analogues. Among the synthetic motors created thus far, DNA motors that undertake discrete steps on RNA tracks have shown the greatest promise. Nonetheless, DNA nanomotors lack intrinsic directionality, are low speed and take a limited number of steps prior to stalling or dissociation. Herein, we report the first example of a highly tunable DNA origami motor that moves linearly over micron distances at an average speed of 40 nm/min. Importantly, nanomotors move unidirectionally without intervention through an external force field or a patterned track. Because DNA origami enables precise testing of nanoscale structure-function relationships, we were able to experimentally study the role of motor shape, chassis flexibility, leg distribution, and total number of legs in tuning performance. An anisotropic rigid chassis coupled with a high density of legs maximizes nanomotor speed and endurance.
© 2020 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Keywords:  DNA motors; DNA origami; dynamic DNA nanotechnology; fluorescence microscopy; nanomachines

Year:  2020        PMID: 32017312      PMCID: PMC7301628          DOI: 10.1002/anie.201916281

Source DB:  PubMed          Journal:  Angew Chem Int Ed Engl        ISSN: 1433-7851            Impact factor:   15.336


  31 in total

1.  Mechanism for a directional, processive, and reversible DNA motor.

Authors:  Jonathan Bath; Simon J Green; Katherine E Allen; Andrew J Turberfield
Journal:  Small       Date:  2009-07       Impact factor: 13.281

Review 2.  Programming Motions of DNA Origami Nanomachines.

Authors:  Fei Wang; Xueli Zhang; Xiaoguo Liu; Chunhai Fan; Qian Li
Journal:  Small       Date:  2019-03-25       Impact factor: 13.281

3.  Autonomous movement of platinum-loaded stomatocytes.

Authors:  Daniela A Wilson; Roeland J M Nolte; Jan C M van Hest
Journal:  Nat Chem       Date:  2012-02-26       Impact factor: 24.427

4.  Exploring the speed limit of toehold exchange with a cartwheeling DNA acrobat.

Authors:  Jieming Li; Alexander Johnson-Buck; Yuhe Renee Yang; William M Shih; Hao Yan; Nils G Walter
Journal:  Nat Nanotechnol       Date:  2018-05-07       Impact factor: 39.213

Review 5.  Walking molecules.

Authors:  Max von Delius; David A Leigh
Journal:  Chem Soc Rev       Date:  2011-03-17       Impact factor: 54.564

6.  A synthetic DNA motor that transports nanoparticles along carbon nanotubes.

Authors:  Tae-Gon Cha; Jing Pan; Haorong Chen; Janette Salgado; Xiang Li; Chengde Mao; Jong Hyun Choi
Journal:  Nat Nanotechnol       Date:  2013-12-08       Impact factor: 39.213

7.  Thermodynamic effects of formamide on DNA stability.

Authors:  R D Blake; S G Delcourt
Journal:  Nucleic Acids Res       Date:  1996-06-01       Impact factor: 16.971

8.  A proximity-based programmable DNA nanoscale assembly line.

Authors:  Hongzhou Gu; Jie Chao; Shou-Jun Xiao; Nadrian C Seeman
Journal:  Nature       Date:  2010-05-13       Impact factor: 49.962

9.  Direct observation of single kinesin molecules moving along microtubules.

Authors:  R D Vale; T Funatsu; D W Pierce; L Romberg; Y Harada; T Yanagida
Journal:  Nature       Date:  1996-04-04       Impact factor: 49.962

10.  High-speed DNA-based rolling motors powered by RNase H.

Authors:  Kevin Yehl; Andrew Mugler; Skanda Vivek; Yang Liu; Yun Zhang; Mengzhen Fan; Eric R Weeks; Khalid Salaita
Journal:  Nat Nanotechnol       Date:  2015-11-30       Impact factor: 39.213

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  8 in total

Review 1.  Synthetic biology approaches to dissecting linear motor protein function: towards the design and synthesis of artificial autonomous protein walkers.

Authors:  Heiner Linke; Birte Höcker; Ken'ya Furuta; Nancy R Forde; Paul M G Curmi
Journal:  Biophys Rev       Date:  2020-07-10

2.  Massively Parallelized Molecular Force Manipulation with On-Demand Thermal and Optical Control.

Authors:  Hanquan Su; Joshua M Brockman; Yuxin Duan; Navoneel Sen; Hemani Chhabra; Alisina Bazrafshan; Aaron T Blanchard; Travis Meyer; Brooke Andrews; Jonathan P K Doye; Yonggang Ke; R Brian Dyer; Khalid Salaita
Journal:  J Am Chem Soc       Date:  2021-11-11       Impact factor: 16.383

3.  Engineering DNA-Functionalized Nanostructures to Bind Nucleic Acid Targets Heteromultivalently with Enhanced Avidity.

Authors:  Brendan R Deal; Rong Ma; Victor Pui-Yan Ma; Hanquan Su; James T Kindt; Khalid Salaita
Journal:  J Am Chem Soc       Date:  2020-05-14       Impact factor: 15.419

4.  Building a community to engineer synthetic cells and organelles from the bottom-up.

Authors:  Oskar Staufer; Jacqueline A De Lora; Eleonora Bailoni; Alisina Bazrafshan; Amelie S Benk; Kevin Jahnke; Zachary A Manzer; Lado Otrin; Telmo Díez Pérez; Judee Sharon; Jan Steinkühler; Katarzyna P Adamala; Bruna Jacobson; Marileen Dogterom; Kerstin Göpfrich; Darko Stefanovic; Susan R Atlas; Michael Grunze; Matthew R Lakin; Andrew P Shreve; Joachim P Spatz; Gabriel P López
Journal:  Elife       Date:  2021-12-20       Impact factor: 8.140

Review 5.  Through the Eyes of Creators: Observing Artificial Molecular Motors.

Authors:  Ivan N Unksov; Chapin S Korosec; Pradheebha Surendiran; Damiano Verardo; Roman Lyttleton; Nancy R Forde; Heiner Linke
Journal:  ACS Nanosci Au       Date:  2022-01-13

Review 6.  DNA Walkers for Biosensing Development.

Authors:  Lu Song; Ying Zhuge; Xiaolei Zuo; Min Li; Fang Wang
Journal:  Adv Sci (Weinh)       Date:  2022-04-22       Impact factor: 17.521

7.  A synthetic tubular molecular transport system.

Authors:  Pierre Stömmer; Henrik Kiefer; Enzo Kopperger; Maximilian N Honemann; Massimo Kube; Friedrich C Simmel; Roland R Netz; Hendrik Dietz
Journal:  Nat Commun       Date:  2021-07-20       Impact factor: 14.919

8.  Engineering control circuits for molecular robots using synthetic biology.

Authors:  Ting-Yen Wei; Warren C Ruder
Journal:  APL Mater       Date:  2020-10-01       Impact factor: 5.096

  8 in total

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