Literature DB >> 24225529

Resolution and measurement of heteronuclear dipolar couplings of a noncrystalline protein immobilized in a biological supramolecular assembly by proton-detected MAS solid-state NMR spectroscopy.

Sang Ho Park1, Chen Yang2, Stanley J Opella3, Leonard J Mueller2.   

Abstract

Two-dimensional (15)N chemical shift/(1)H chemical shift and three-dimensional (1)H-(15)N dipolar coupling/(15)N chemical shift/(1)H chemical shift MAS solid-state NMR correlation spectra of the filamentous bacteriophage Pf1 major coat protein show single-site resolution in noncrystalline, intact-phage preparations. The high sensitivity and resolution result from (1)H detection at 600MHz under 50kHz magic angle spinning using ∼0.5mg of perdeuterated and uniformly (15)N-labeled protein in which the exchangeable amide sites are partially or completely back-exchanged (reprotonated). Notably, the heteronuclear (1)H-(15)N dipolar coupling frequency dimension is shown to select among (15)N resonances, which will be useful in structural studies of larger proteins where the resonances exhibit a high degree of overlap in multidimensional chemical shift correlation spectra.
Copyright © 2013 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Fast MAS; Perdeuteration; Pf1 bacteriophage; Proton detection; Separated local field spectroscopy; Three-dimensional NMR; Two-dimensional NMR; Variable contact time cross-polarization

Mesh:

Substances:

Year:  2013        PMID: 24225529      PMCID: PMC3915937          DOI: 10.1016/j.jmr.2013.10.009

Source DB:  PubMed          Journal:  J Magn Reson        ISSN: 1090-7807            Impact factor:   2.229


  19 in total

1.  Dipolar recoupling in magic angle spinning solid-state nuclear magnetic resonance.

Authors:  Gaël De Paëpe
Journal:  Annu Rev Phys Chem       Date:  2012-02-07       Impact factor: 12.703

2.  Ultra-high resolution in MAS solid-state NMR of perdeuterated proteins: implications for structure and dynamics.

Authors:  Bernd Reif
Journal:  J Magn Reson       Date:  2012-01-05       Impact factor: 2.229

3.  Optimum levels of exchangeable protons in perdeuterated proteins for proton detection in MAS solid-state NMR spectroscopy.

Authors:  Umit Akbey; Sascha Lange; W Trent Franks; Rasmus Linser; Kristina Rehbein; Anne Diehl; Barth-Jan van Rossum; Bernd Reif; Hartmut Oschkinat
Journal:  J Biomol NMR       Date:  2009-08-22       Impact factor: 2.835

4.  Backbone assignment of fully protonated solid proteins by 1H detection and ultrafast magic-angle-spinning NMR spectroscopy.

Authors:  Alessandro Marchetti; Stefan Jehle; Michele Felletti; Michael J Knight; Yao Wang; Zhi-Qiang Xu; Ah Young Park; Gottfried Otting; Anne Lesage; Lyndon Emsley; Nicholas E Dixon; Guido Pintacuda
Journal:  Angew Chem Int Ed Engl       Date:  2012-09-28       Impact factor: 15.336

Review 5.  Solid-state NMR-based approaches for supramolecular structure elucidation.

Authors:  Markus Weingarth; Marc Baldus
Journal:  Acc Chem Res       Date:  2013-04-15       Impact factor: 22.384

6.  NMRPipe: a multidimensional spectral processing system based on UNIX pipes.

Authors:  F Delaglio; S Grzesiek; G W Vuister; G Zhu; J Pfeifer; A Bax
Journal:  J Biomol NMR       Date:  1995-11       Impact factor: 2.835

7.  Structure and dynamics of the Pf1 filamentous bacteriophage coat protein in micelles.

Authors:  R A Schiksnis; M J Bogusky; P Tsang; S J Opella
Journal:  Biochemistry       Date:  1987-03-10       Impact factor: 3.162

8.  Structure of the coat protein in Pf1 bacteriophage determined by solid-state NMR spectroscopy.

Authors:  David S Thiriot; Alexander A Nevzorov; Lena Zagyanskiy; Chin H Wu; Stanley J Opella
Journal:  J Mol Biol       Date:  2004-08-13       Impact factor: 5.469

9.  Solid-state NMR analysis of membrane proteins and protein aggregates by proton detected spectroscopy.

Authors:  Donghua H Zhou; Andrew J Nieuwkoop; Deborah A Berthold; Gemma Comellas; Lindsay J Sperling; Ming Tang; Gautam J Shah; Elliott J Brea; Luisel R Lemkau; Chad M Rienstra
Journal:  J Biomol NMR       Date:  2012-09-18       Impact factor: 2.835

10.  Measurement of sample temperatures under magic-angle spinning from the chemical shift and spin-lattice relaxation rate of 79Br in KBr powder.

Authors:  Kent R Thurber; Robert Tycko
Journal:  J Magn Reson       Date:  2008-09-25       Impact factor: 2.229

View more
  14 in total

1.  Selective excitation enables assignment of proton resonances and (1)H-(1)H distance measurement in ultrafast magic angle spinning solid state NMR spectroscopy.

Authors:  Rongchun Zhang; Ayyalusamy Ramamoorthy
Journal:  J Chem Phys       Date:  2015-07-21       Impact factor: 3.488

Review 2.  Structural biology of supramolecular assemblies by magic-angle spinning NMR spectroscopy.

Authors:  Caitlin M Quinn; Tatyana Polenova
Journal:  Q Rev Biophys       Date:  2017-01       Impact factor: 5.318

3.  Insights into the structure and dynamics of measles virus nucleocapsids by 1H-detected solid-state NMR.

Authors:  Emeline Barbet-Massin; Michele Felletti; Robert Schneider; Stefan Jehle; Guillaume Communie; Nicolas Martinez; Malene Ringkjøbing Jensen; Rob W H Ruigrok; Lyndon Emsley; Anne Lesage; Martin Blackledge; Guido Pintacuda
Journal:  Biophys J       Date:  2014-08-19       Impact factor: 4.033

4.  RF inhomogeneity and how it controls CPMAS.

Authors:  Rupal Gupta; Guangjin Hou; Tatyana Polenova; Alexander J Vega
Journal:  Solid State Nucl Magn Reson       Date:  2015-09-25       Impact factor: 2.293

Review 5.  Applications of NMR to membrane proteins.

Authors:  Stanley J Opella; Francesca M Marassi
Journal:  Arch Biochem Biophys       Date:  2017-05-18       Impact factor: 4.013

6.  Dynamics-based selective 2D (1)H/(1)H chemical shift correlation spectroscopy under ultrafast MAS conditions.

Authors:  Rongchun Zhang; Ayyalusamy Ramamoorthy
Journal:  J Chem Phys       Date:  2015-05-28       Impact factor: 3.488

7.  Interaction of Monomeric Interleukin-8 with CXCR1 Mapped by Proton-Detected Fast MAS Solid-State NMR.

Authors:  Sang Ho Park; Sabrina Berkamp; Jasmina Radoicic; Anna A De Angelis; Stanley J Opella
Journal:  Biophys J       Date:  2017-12-19       Impact factor: 4.033

Review 8.  Magic angle spinning NMR of viruses.

Authors:  Caitlin M Quinn; Manman Lu; Christopher L Suiter; Guangjin Hou; Huilan Zhang; Tatyana Polenova
Journal:  Prog Nucl Magn Reson Spectrosc       Date:  2015-02-16       Impact factor: 9.795

9.  A cross-polarization based rotating-frame separated-local-field NMR experiment under ultrafast MAS conditions.

Authors:  Rongchun Zhang; Joshua Damron; Thomas Vosegaard; Ayyalusamy Ramamoorthy
Journal:  J Magn Reson       Date:  2014-11-15       Impact factor: 2.229

Review 10.  Membrane protein structure from rotational diffusion.

Authors:  Bibhuti B Das; Sang Ho Park; Stanley J Opella
Journal:  Biochim Biophys Acta       Date:  2014-04-18
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.