Literature DB >> 24189530

Reprogramming somatic cells to pluripotency: a fresh look at Yamanaka's model.

Yangxin Li1, Zhenya Shen, Harnath Shelat, Yong-Jian Geng.   

Abstract

In 2006, Dr Shinya Yamanaka succeeded to reprogram somatic cells into pluripotent stem cells (iPSC) by delivering the genes encoding Oct4, Sox2, Klf4, and c-Myc. This achievement represents a fundamental breakthrough in stem cell biology and opens up a new era in regenerative medicine. However, the molecular processes by which somatic cells are reprogrammed into iPSC remain poorly understood. In 2009, Yamanaka proposed the elite and stochastic models for reprogramming mechanisms. To date, many investigators in the field of iPSC research support the concept of stochastic model, i.e., somatic cell reprogramming is an event of epigenetic transformation. A mathematical model, f (Cd, k), has also been proposed to predict the stochastic process. Here we wish to revisit the Yamanaka model and summarize the recent advances in this research field.

Entities:  

Keywords:  Yamanaka model; deterministic phase; epigenetic transformation; iPSC; mathematical model; stochastic phase

Mesh:

Substances:

Year:  2013        PMID: 24189530      PMCID: PMC3903711          DOI: 10.4161/cc.26952

Source DB:  PubMed          Journal:  Cell Cycle        ISSN: 1551-4005            Impact factor:   4.534


  33 in total

1.  Elite and stochastic models for induced pluripotent stem cell generation.

Authors:  Shinya Yamanaka
Journal:  Nature       Date:  2009-07-02       Impact factor: 49.962

2.  Dissecting direct reprogramming through integrative genomic analysis.

Authors:  Tarjei S Mikkelsen; Jacob Hanna; Xiaolan Zhang; Manching Ku; Marius Wernig; Patrick Schorderet; Bradley E Bernstein; Rudolf Jaenisch; Eric S Lander; Alexander Meissner
Journal:  Nature       Date:  2008-05-28       Impact factor: 49.962

3.  A p53-mediated DNA damage response limits reprogramming to ensure iPS cell genomic integrity.

Authors:  Rosa M Marión; Katerina Strati; Han Li; Matilde Murga; Raquel Blanco; Sagrario Ortega; Oscar Fernandez-Capetillo; Manuel Serrano; Maria A Blasco
Journal:  Nature       Date:  2009-08-09       Impact factor: 49.962

4.  H3K9 methylation is a barrier during somatic cell reprogramming into iPSCs.

Authors:  Jiekai Chen; He Liu; Jing Liu; Jing Qi; Bei Wei; Jiaqi Yang; Hanquan Liang; You Chen; Jing Chen; Yaran Wu; Lin Guo; Jieying Zhu; Xiangjie Zhao; Tianran Peng; Yixin Zhang; Shen Chen; Xuejia Li; Dongwei Li; Tao Wang; Duanqing Pei
Journal:  Nat Genet       Date:  2012-12-02       Impact factor: 38.330

5.  The Ink4/Arf locus is a barrier for iPS cell reprogramming.

Authors:  Han Li; Manuel Collado; Aranzazu Villasante; Katerina Strati; Sagrario Ortega; Marta Cañamero; Maria A Blasco; Manuel Serrano
Journal:  Nature       Date:  2009-08-09       Impact factor: 49.962

6.  Induction of pluripotent stem cells from mouse embryonic and adult fibroblast cultures by defined factors.

Authors:  Kazutoshi Takahashi; Shinya Yamanaka
Journal:  Cell       Date:  2006-08-10       Impact factor: 41.582

7.  Linking the p53 tumour suppressor pathway to somatic cell reprogramming.

Authors:  Teruhisa Kawamura; Jotaro Suzuki; Yunyuan V Wang; Sergio Menendez; Laura Batlle Morera; Angel Raya; Geoffrey M Wahl; Juan Carlos Izpisúa Belmonte
Journal:  Nature       Date:  2009-08-09       Impact factor: 49.962

8.  Induction of pluripotent stem cells from primary human fibroblasts with only Oct4 and Sox2.

Authors:  Danwei Huangfu; Kenji Osafune; René Maehr; Wenjun Guo; Astrid Eijkelenboom; Shuibing Chen; Whitney Muhlestein; Douglas A Melton
Journal:  Nat Biotechnol       Date:  2008-10-12       Impact factor: 54.908

9.  Embryonic stem cell-specific microRNAs promote induced pluripotency.

Authors:  Robert L Judson; Joshua E Babiarz; Monica Venere; Robert Blelloch
Journal:  Nat Biotechnol       Date:  2009-04-12       Impact factor: 54.908

10.  Induction of pluripotent stem cells by defined factors is greatly improved by small-molecule compounds.

Authors:  Danwei Huangfu; René Maehr; Wenjun Guo; Astrid Eijkelenboom; Melinda Snitow; Alice E Chen; Douglas A Melton
Journal:  Nat Biotechnol       Date:  2008-06-22       Impact factor: 54.908

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  6 in total

1.  Rapamycin induces pluripotent genes associated with avoidance of replicative senescence.

Authors:  Tatiana V Pospelova; Tatiana V Bykova; Svetlana G Zubova; Natalia V Katolikova; Natalia M Yartzeva; Valery A Pospelov
Journal:  Cell Cycle       Date:  2013-12-02       Impact factor: 4.534

2.  Mathematical approaches to modeling development and reprogramming.

Authors:  Rob Morris; Ignacio Sancho-Martinez; Tatyana O Sharpee; Juan Carlos Izpisua Belmonte
Journal:  Proc Natl Acad Sci U S A       Date:  2014-03-20       Impact factor: 11.205

3.  Novel AKT phosphorylation sites identified in the pluripotency factors OCT4, SOX2 and KLF4.

Authors:  Peter N Malak; Benjamin Dannenmann; Alexander Hirth; Oliver C Rothfuss; Klaus Schulze-Osthoff
Journal:  Cell Cycle       Date:  2015       Impact factor: 4.534

4.  Post-irradiation promotes susceptibility to reprogramming to pluripotent state in human fibroblasts.

Authors:  Seung Bum Lee; Sung-Hoon Han; Min-Jung Kim; Sehwan Shim; Hye-Yun Shin; Sun-Joo Lee; Hye Won Kim; Won-Suk Jang; Songwon Seo; Seongjae Jang; Yanghee Lee; Sunhoo Park
Journal:  Cell Cycle       Date:  2017-09-14       Impact factor: 4.534

Review 5.  Nanog Dynamics in Mouse Embryonic Stem Cells: Results from Systems Biology Approaches.

Authors:  Lucia Marucci
Journal:  Stem Cells Int       Date:  2017-06-08       Impact factor: 5.443

6.  Nuclear delivery of recombinant OCT4 by chitosan nanoparticles for transgene-free generation of protein-induced pluripotent stem cells.

Authors:  Salma Tammam; Peter Malak; Daphne Correa; Oliver Rothfuss; Hassan M E Azzazy; Alf Lamprecht; Klaus Schulze-Osthoff
Journal:  Oncotarget       Date:  2016-06-21
  6 in total

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