Literature DB >> 24180414

General method for regulating protein stability with light.

Kimberly M Bonger1, Rishi Rakhit, Alexander Y Payumo, James K Chen, Thomas J Wandless.   

Abstract

Post-translational regulation of protein abundance in cells is a powerful tool for studying protein function. Here, we describe a novel genetically encoded protein domain that is degraded upon exposure to nontoxic blue light. We demonstrate that fusion proteins containing this domain are rapidly degraded in cultured cells and in zebrafish upon illumination.

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Year:  2013        PMID: 24180414      PMCID: PMC3906921          DOI: 10.1021/cb400755b

Source DB:  PubMed          Journal:  ACS Chem Biol        ISSN: 1554-8929            Impact factor:   5.100


  20 in total

1.  A light-switchable gene promoter system.

Authors:  Sae Shimizu-Sato; Enamul Huq; James M Tepperman; Peter H Quail
Journal:  Nat Biotechnol       Date:  2002-09-03       Impact factor: 54.908

2.  Light-activated DNA binding in a designed allosteric protein.

Authors:  Devin Strickland; Keith Moffat; Tobin R Sosnick
Journal:  Proc Natl Acad Sci U S A       Date:  2008-07-30       Impact factor: 11.205

3.  Induction of protein-protein interactions in live cells using light.

Authors:  Masayuki Yazawa; Amir M Sadaghiani; Brian Hsueh; Ricardo E Dolmetsch
Journal:  Nat Biotechnol       Date:  2009-10-04       Impact factor: 54.908

4.  Rationally improving LOV domain-based photoswitches.

Authors:  Devin Strickland; Xiaolan Yao; Grzegorz Gawlak; Michael K Rosen; Kevin H Gardner; Tobin R Sosnick
Journal:  Nat Methods       Date:  2010-06-20       Impact factor: 28.547

5.  Mechanism-based tuning of a LOV domain photoreceptor.

Authors:  Brian D Zoltowski; Brian Vaccaro; Brian R Crane
Journal:  Nat Chem Biol       Date:  2009-08-30       Impact factor: 15.040

6.  Surface sites for engineering allosteric control in proteins.

Authors:  Jeeyeon Lee; Madhusudan Natarajan; Vishal C Nashine; Michael Socolich; Tina Vo; William P Russ; Stephen J Benkovic; Rama Ranganathan
Journal:  Science       Date:  2008-10-17       Impact factor: 47.728

7.  A LOV2 domain-based optogenetic tool to control protein degradation and cellular function.

Authors:  Christian Renicke; Daniel Schuster; Svetlana Usherenko; Lars-Oliver Essen; Christof Taxis
Journal:  Chem Biol       Date:  2013-04-18

8.  Rapid blue-light-mediated induction of protein interactions in living cells.

Authors:  Matthew J Kennedy; Robert M Hughes; Leslie A Peteya; Joel W Schwartz; Michael D Ehlers; Chandra L Tucker
Journal:  Nat Methods       Date:  2010-10-31       Impact factor: 28.547

9.  A genetically encoded photoactivatable Rac controls the motility of living cells.

Authors:  Yi I Wu; Daniel Frey; Oana I Lungu; Angelika Jaehrig; Ilme Schlichting; Brian Kuhlman; Klaus M Hahn
Journal:  Nature       Date:  2009-08-19       Impact factor: 49.962

10.  Spatiotemporal control of cell signalling using a light-switchable protein interaction.

Authors:  Anselm Levskaya; Orion D Weiner; Wendell A Lim; Christopher A Voigt
Journal:  Nature       Date:  2009-09-13       Impact factor: 49.962

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  40 in total

Review 1.  Illuminating cell signalling with optogenetic tools.

Authors:  Doug Tischer; Orion D Weiner
Journal:  Nat Rev Mol Cell Biol       Date:  2014-07-16       Impact factor: 94.444

2.  Photoreaction Mechanisms of Flavoprotein Photoreceptors and Their Applications.

Authors:  Tatsuya Iwata; Shinji Masuda
Journal:  Adv Exp Med Biol       Date:  2021       Impact factor: 2.622

3.  Illuminating developmental biology through photochemistry.

Authors:  Lukasz Kowalik; James K Chen
Journal:  Nat Chem Biol       Date:  2017-05-17       Impact factor: 15.040

Review 4.  Synthetic Switches and Regulatory Circuits in Plants.

Authors:  Jennifer Andres; Tim Blomeier; Matias D Zurbriggen
Journal:  Plant Physiol       Date:  2019-01-28       Impact factor: 8.340

Review 5.  Tools for controlling protein interactions using light.

Authors:  Chandra L Tucker; Justin D Vrana; Matthew J Kennedy
Journal:  Curr Protoc Cell Biol       Date:  2014-09-02

Review 6.  How to control proteins with light in living systems.

Authors:  Arnaud Gautier; Carole Gauron; Michel Volovitch; David Bensimon; Ludovic Jullien; Sophie Vriz
Journal:  Nat Chem Biol       Date:  2014-07       Impact factor: 15.040

Review 7.  Optical control of biological processes by light-switchable proteins.

Authors:  Linlin Z Fan; Michael Z Lin
Journal:  Wiley Interdiscip Rev Dev Biol       Date:  2015-04-08       Impact factor: 5.814

8.  Repurposing Protein Degradation for Optogenetic Modulation of Protein Activities.

Authors:  Payel Mondal; Vishnu V Krishnamurthy; Savanna R Sharum; Neeka Haack; Huiwen Zhou; Jennifer Cheng; Jing Yang; Kai Zhang
Journal:  ACS Synth Biol       Date:  2019-10-21       Impact factor: 5.110

Review 9.  Precision Control of CRISPR-Cas9 Using Small Molecules and Light.

Authors:  Soumyashree A Gangopadhyay; Kurt J Cox; Debasish Manna; Donghyun Lim; Basudeb Maji; Qingxuan Zhou; Amit Choudhary
Journal:  Biochemistry       Date:  2019-01-22       Impact factor: 3.162

Review 10.  Protein engineering: a new frontier for biological therapeutics.

Authors:  Peter H Tobin; David H Richards; Randolph A Callender; Corey J Wilson
Journal:  Curr Drug Metab       Date:  2014       Impact factor: 3.731

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