Literature DB >> 24937071

How to control proteins with light in living systems.

Arnaud Gautier1, Carole Gauron2, Michel Volovitch3, David Bensimon4, Ludovic Jullien1, Sophie Vriz5.   

Abstract

The possibility offered by photocontrolling the activity of biomolecules in vivo while recording physiological parameters is opening up new opportunities for the study of physiological processes at the single-cell level in a living organism. For the last decade, such tools have been mainly used in neuroscience, and their application in freely moving animals has revolutionized this field. New photochemical approaches enable the control of various cellular processes by manipulating a wide range of protein functions in a noninvasive way and with unprecedented spatiotemporal resolution. We are at a pivotal moment where biologists can adapt these cutting-edge technologies to their system of study. This user-oriented review presents the state of the art and highlights technical issues to be resolved in the near future for wide and easy use of these powerful approaches.

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Year:  2014        PMID: 24937071     DOI: 10.1038/nchembio.1534

Source DB:  PubMed          Journal:  Nat Chem Biol        ISSN: 1552-4450            Impact factor:   15.040


  95 in total

1.  Multimodal fast optical interrogation of neural circuitry.

Authors:  Feng Zhang; Li-Ping Wang; Martin Brauner; Jana F Liewald; Kenneth Kay; Natalie Watzke; Phillip G Wood; Ernst Bamberg; Georg Nagel; Alexander Gottschalk; Karl Deisseroth
Journal:  Nature       Date:  2007-04-05       Impact factor: 49.962

2.  Fluorescein analogues as photoremovable protecting groups absorbing at ∼520 nm.

Authors:  Peter Sebej; Jürgen Wintner; Pavel Müller; Tomáš Slanina; Jamaludin Al Anshori; Lovely Angel Panamparambil Antony; Petr Klán; Jakob Wirz
Journal:  J Org Chem       Date:  2012-07-31       Impact factor: 4.354

3.  Spatiotemporal control of small GTPases with light using the LOV domain.

Authors:  Yi I Wu; Xiaobo Wang; Li He; Denise Montell; Klaus M Hahn
Journal:  Methods Enzymol       Date:  2011       Impact factor: 1.600

4.  o-Fluoroazobenzenes as readily synthesized photoswitches offering nearly quantitative two-way isomerization with visible light.

Authors:  David Bléger; Jutta Schwarz; Albert M Brouwer; Stefan Hecht
Journal:  J Am Chem Soc       Date:  2012-12-13       Impact factor: 15.419

5.  Photocontrol of protein activity in cultured cells and zebrafish with one- and two-photon illumination.

Authors:  Deepak Kumar Sinha; Pierre Neveu; Nathalie Gagey; Isabelle Aujard; Chouaha Benbrahim-Bouzidi; Thomas Le Saux; Christine Rampon; Carole Gauron; Bernard Goetz; Sylvie Dubruille; Marc Baaden; Michel Volovitch; David Bensimon; Sophie Vriz; Ludovic Jullien
Journal:  Chembiochem       Date:  2010-03-22       Impact factor: 3.164

6.  Surface sites for engineering allosteric control in proteins.

Authors:  Jeeyeon Lee; Madhusudan Natarajan; Vishal C Nashine; Michael Socolich; Tina Vo; William P Russ; Stephen J Benkovic; Rama Ranganathan
Journal:  Science       Date:  2008-10-17       Impact factor: 47.728

7.  A LOV2 domain-based optogenetic tool to control protein degradation and cellular function.

Authors:  Christian Renicke; Daniel Schuster; Svetlana Usherenko; Lars-Oliver Essen; Christof Taxis
Journal:  Chem Biol       Date:  2013-04-18

8.  Channelrhodopsin-2, a directly light-gated cation-selective membrane channel.

Authors:  Georg Nagel; Tanjef Szellas; Wolfram Huhn; Suneel Kateriya; Nona Adeishvili; Peter Berthold; Doris Ollig; Peter Hegemann; Ernst Bamberg
Journal:  Proc Natl Acad Sci U S A       Date:  2003-11-13       Impact factor: 11.205

9.  General method for regulating protein stability with light.

Authors:  Kimberly M Bonger; Rishi Rakhit; Alexander Y Payumo; James K Chen; Thomas J Wandless
Journal:  ACS Chem Biol       Date:  2013-11-08       Impact factor: 5.100

10.  Tethered ligands reveal glutamate receptor desensitization depends on subunit occupancy.

Authors:  Andreas Reiner; Ehud Y Isacoff
Journal:  Nat Chem Biol       Date:  2014-02-23       Impact factor: 15.040

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  56 in total

1.  Regulation of neural gene transcription by optogenetic inhibition of the RE1-silencing transcription factor.

Authors:  Francesco Paonessa; Stefania Criscuolo; Silvio Sacchetti; Davide Amoroso; Helena Scarongella; Federico Pecoraro Bisogni; Emanuele Carminati; Giacomo Pruzzo; Luca Maragliano; Fabrizia Cesca; Fabio Benfenati
Journal:  Proc Natl Acad Sci U S A       Date:  2015-12-23       Impact factor: 11.205

2.  Optical Control of CRISPR/Cas9 Gene Editing.

Authors:  James Hemphill; Erin K Borchardt; Kalyn Brown; Aravind Asokan; Alexander Deiters
Journal:  J Am Chem Soc       Date:  2015-04-23       Impact factor: 15.419

3.  Cell biology: Organelles under light control.

Authors:  Franck Perez
Journal:  Nature       Date:  2015-01-07       Impact factor: 49.962

4.  Investigations of human myosin VI targeting using optogenetically controlled cargo loading.

Authors:  Alexander R French; Tobin R Sosnick; Ronald S Rock
Journal:  Proc Natl Acad Sci U S A       Date:  2017-02-13       Impact factor: 11.205

5.  Mechanism and bottlenecks in strand photodissociation of split green fluorescent proteins (GFPs).

Authors:  Chi-Yun Lin; Johan Both; Keunbong Do; Steven G Boxer
Journal:  Proc Natl Acad Sci U S A       Date:  2017-02-27       Impact factor: 11.205

6.  A photoactivatable Cre-loxP recombination system for optogenetic genome engineering.

Authors:  Fuun Kawano; Risako Okazaki; Masayuki Yazawa; Moritoshi Sato
Journal:  Nat Chem Biol       Date:  2016-10-10       Impact factor: 15.040

Review 7.  Optochemical Control of Biological Processes in Cells and Animals.

Authors:  Nicholas Ankenbruck; Taylor Courtney; Yuta Naro; Alexander Deiters
Journal:  Angew Chem Int Ed Engl       Date:  2018-02-01       Impact factor: 15.336

8.  Optogenetics: Switching with red and blue.

Authors:  Fuun Kawano; Fan Shi; Masayuki Yazawa
Journal:  Nat Chem Biol       Date:  2017-05-17       Impact factor: 15.040

Review 9.  Synthetic Morphogenesis.

Authors:  Brian P Teague; Patrick Guye; Ron Weiss
Journal:  Cold Spring Harb Perspect Biol       Date:  2016-09-01       Impact factor: 10.005

Review 10.  Cellular Biophysics.

Authors:  Rick Horwitz
Journal:  Biophys J       Date:  2016-03-08       Impact factor: 4.033

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