Literature DB >> 31600062

Repurposing Protein Degradation for Optogenetic Modulation of Protein Activities.

Payel Mondal, Vishnu V Krishnamurthy, Savanna R Sharum, Neeka Haack, Huiwen Zhou, Jennifer Cheng, Jing Yang1, Kai Zhang.   

Abstract

Non-neuronal optogenetic approaches empower precise regulation of protein dynamics in live cells but often require target-specific protein engineering. To address this challenge, we developed a generalizable light-modulated protein stabilization system (GLIMPSe) to control the intracellular protein level independent of its functionality. We applied GLIMPSe to control two distinct classes of proteins: mitogen-activated protein kinase phosphatase 3 (MKP3), a negative regulator of the extracellular signal-regulated kinase (ERK) pathway, and a constitutively active form of MEK (CA MEK), a positive regulator of the same pathway. Kinetics study showed that light-induced protein stabilization could be achieved within 30 min of blue light stimulation. GLIMPSe enables target-independent optogenetic control of protein activities and therefore minimizes the systematic variation embedded within different photoactivatable proteins. Overall, GLIMPSe promises to achieve light-mediated post-translational stabilization of a wide array of target proteins in live cells.

Entities:  

Keywords:  CA MEK; GLIMPSe; MKP3; degron; optogenetics; protein degradation

Year:  2019        PMID: 31600062      PMCID: PMC7039648          DOI: 10.1021/acssynbio.9b00285

Source DB:  PubMed          Journal:  ACS Synth Biol        ISSN: 2161-5063            Impact factor:   5.110


  48 in total

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3.  The Ter mutation in the dead end gene causes germ cell loss and testicular germ cell tumours.

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Journal:  Nature       Date:  2005-05-19       Impact factor: 49.962

Review 4.  Optogenetic control of intracellular signaling pathways.

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5.  The Spatiotemporal Limits of Developmental Erk Signaling.

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Journal:  Dev Cell       Date:  2017-01-23       Impact factor: 12.270

6.  Novel functions of the ubiquitin-independent proteasome system in regulating Xenopus germline development.

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Journal:  Development       Date:  2019-04-23       Impact factor: 6.868

7.  High cleavage efficiency of a 2A peptide derived from porcine teschovirus-1 in human cell lines, zebrafish and mice.

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8.  A light-triggered protein secretion system.

Authors:  Daniel Chen; Emily S Gibson; Matthew J Kennedy
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9.  Light-mediated kinetic control reveals the temporal effect of the Raf/MEK/ERK pathway in PC12 cell neurite outgrowth.

Authors:  Kai Zhang; Liting Duan; Qunxiang Ong; Ziliang Lin; Pooja Mahendra Varman; Kijung Sung; Bianxiao Cui
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10.  Reversible Optogenetic Control of Subcellular Protein Localization in a Live Vertebrate Embryo.

Authors:  Clare E Buckley; Rachel E Moore; Anna Reade; Anna R Goldberg; Orion D Weiner; Jonathan D W Clarke
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  6 in total

Review 1.  On the cutting edge: protease-based methods for sensing and controlling cell biology.

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Review 2.  Steering Molecular Activity with Optogenetics: Recent Advances and Perspectives.

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Review 3.  Engineering Photosensory Modules of Non-Opsin-Based Optogenetic Actuators.

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Journal:  Int J Mol Sci       Date:  2020-09-07       Impact factor: 5.923

Review 4.  Optogenetics in bacteria - applications and opportunities.

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Journal:  FEMS Microbiol Rev       Date:  2022-03-03       Impact factor: 16.408

5.  A light way for nuclear cell biologists.

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Review 6.  Optogenetic approaches for understanding homeostatic and degenerative processes in Drosophila.

Authors:  Wen Kin Lim; Prameet Kaur; Huanyan Huang; Richard Shim Jo; Anupriya Ramamoorthy; Li Fang Ng; Jahnavi Suresh; Fahrisa Islam Maisha; Ajay S Mathuru; Nicholas S Tolwinski
Journal:  Cell Mol Life Sci       Date:  2021-07-07       Impact factor: 9.261

  6 in total

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