Literature DB >> 24123610

Novel tripod amphiphiles for membrane protein analysis.

Pil Seok Chae1, Andrew C Kruse, Kamil Gotfryd, Rohini R Rana, Kyung Ho Cho, Søren G F Rasmussen, Hyoung Eun Bae, Richa Chandra, Ulrik Gether, Lan Guan, Brian K Kobilka, Claus J Loland, Bernadette Byrne, Samuel H Gellman.   

Abstract

Integral membrane proteins play central roles in controlling the flow of information and molecules across membranes. Our understanding of membrane protein structures and functions, however, is seriously limited, mainly due to difficulties in handling and analysing these proteins in aqueous solution. The use of a detergent or other amphipathic agents is required to overcome the intrinsic incompatibility between the large lipophilic surfaces displayed by the membrane proteins in their native forms and the polar solvent molecules. Here, we introduce new tripod amphiphiles displaying favourable behaviours toward several membrane protein systems, leading to an enhanced protein solubilisation and stabilisation compared to both conventional detergents and previously described tripod amphiphiles.
Copyright © 2013 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Keywords:  amphiphiles; membrane proteins; molecular design; protein structures; stabilization

Mesh:

Substances:

Year:  2013        PMID: 24123610      PMCID: PMC3947462          DOI: 10.1002/chem.201301423

Source DB:  PubMed          Journal:  Chemistry        ISSN: 0947-6539            Impact factor:   5.236


  48 in total

1.  Rigid Amphiphiles for Membrane Protein Manipulation.

Authors: 
Journal:  Angew Chem Int Ed Engl       Date:  2000-02       Impact factor: 15.336

2.  Lipopeptide detergents designed for the structural study of membrane proteins.

Authors:  Clare-Louise McGregor; Lu Chen; Neil C Pomroy; Peter Hwang; Sandy Go; Avijit Chakrabartty; Gilbert G Privé
Journal:  Nat Biotechnol       Date:  2003-01-13       Impact factor: 54.908

Review 3.  How many drug targets are there?

Authors:  John P Overington; Bissan Al-Lazikani; Andrew L Hopkins
Journal:  Nat Rev Drug Discov       Date:  2006-12       Impact factor: 84.694

4.  Tandem facial amphiphiles for membrane protein stabilization.

Authors:  Pil Seok Chae; Kamil Gotfryd; Jennifer Pacyna; Larry J W Miercke; Søren G F Rasmussen; Rebecca A Robbins; Rohini R Rana; Claus J Loland; Brian Kobilka; Robert Stroud; Bernadette Byrne; Ulrik Gether; Samuel H Gellman
Journal:  J Am Chem Soc       Date:  2010-11-04       Impact factor: 15.419

5.  The structure and catalytic cycle of a sodium-pumping pyrophosphatase.

Authors:  Juho Kellosalo; Tommi Kajander; Konstantin Kogan; Kisun Pokharel; Adrian Goldman
Journal:  Science       Date:  2012-07-27       Impact factor: 47.728

6.  A new class of amphiphiles bearing rigid hydrophobic groups for solubilization and stabilization of membrane proteins.

Authors:  Pil Seok Chae; Søren G F Rasmussen; Rohini R Rana; Kamil Gotfryd; Andrew C Kruse; Aashish Manglik; Kyung Ho Cho; Shailika Nurva; Ulrik Gether; Lan Guan; Claus J Loland; Bernadette Byrne; Brian K Kobilka; Samuel H Gellman
Journal:  Chemistry       Date:  2012-06-22       Impact factor: 5.236

7.  Relating surfactant properties to activity and solubilization of the human adenosine a3 receptor.

Authors:  Bryan W Berger; Roxana Y García; Abraham M Lenhoff; Eric W Kaler; Clifford R Robinson
Journal:  Biophys J       Date:  2005-04-22       Impact factor: 4.033

8.  Trapping and stabilization of integral membrane proteins by hydrophobically grafted glucose-based telomers.

Authors:  Paola Bazzacco; K Shivaji Sharma; Grégory Durand; Fabrice Giusti; Christine Ebel; Jean-Luc Popot; Bernard Pucci
Journal:  Biomacromolecules       Date:  2009-12-14       Impact factor: 6.988

9.  Microscale fluorescent thermal stability assay for membrane proteins.

Authors:  Alexander I Alexandrov; Mauro Mileni; Ellen Y T Chien; Michael A Hanson; Raymond C Stevens
Journal:  Structure       Date:  2008-03       Impact factor: 5.006

10.  Structure and dynamics of the M3 muscarinic acetylcholine receptor.

Authors:  Andrew C Kruse; Jianxin Hu; Albert C Pan; Daniel H Arlow; Daniel M Rosenbaum; Erica Rosemond; Hillary F Green; Tong Liu; Pil Seok Chae; Ron O Dror; David E Shaw; William I Weis; Jürgen Wess; Brian K Kobilka
Journal:  Nature       Date:  2012-02-22       Impact factor: 49.962

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  23 in total

1.  Effect of Detergents on Galactoside Binding by Melibiose Permeases.

Authors:  Anowarul Amin; Parameswaran Hariharan; Pil Seok Chae; Lan Guan
Journal:  Biochemistry       Date:  2015-09-17       Impact factor: 3.162

2.  Pendant-bearing glucose-neopentyl glycol (P-GNG) amphiphiles for membrane protein manipulation: Importance of detergent pendant chain for protein stabilization.

Authors:  Hyoung Eun Bae; Cristina Cecchetti; Yang Du; Satoshi Katsube; Jonas S Mortensen; Weijiao Huang; Shahid Rehan; Ho Jin Lee; Claus J Loland; Lan Guan; Brian K Kobilka; Bernadette Byrne; Pil Seok Chae
Journal:  Acta Biomater       Date:  2020-06-06       Impact factor: 8.947

Review 3.  Methodological advances: the unsung heroes of the GPCR structural revolution.

Authors:  Eshan Ghosh; Punita Kumari; Deepika Jaiman; Arun K Shukla
Journal:  Nat Rev Mol Cell Biol       Date:  2015-01-15       Impact factor: 94.444

4.  Maltose neopentyl glycol-3 (MNG-3) analogues for membrane protein study.

Authors:  Kyung Ho Cho; Mohd Husri; Anowarul Amin; Kamil Gotfryd; Ho Jin Lee; Juyeon Go; Jin Woong Kim; Claus J Loland; Lan Guan; Bernadette Byrne; Pil Seok Chae
Journal:  Analyst       Date:  2015-03-27       Impact factor: 4.616

5.  New penta-saccharide-bearing tripod amphiphiles for membrane protein structure studies.

Authors:  Muhammad Ehsan; Lubna Ghani; Yang Du; Parameswaran Hariharan; Jonas S Mortensen; Orquidea Ribeiro; Hongli Hu; Georgios Skiniotis; Claus J Loland; Lan Guan; Brian K Kobilka; Bernadette Byrne; Pil Seok Chae
Journal:  Analyst       Date:  2017-10-09       Impact factor: 4.616

6.  New Malonate-Derived Tetraglucoside Detergents for Membrane Protein Stability.

Authors:  Muhammad Ehsan; Satoshi Katsube; Cristina Cecchetti; Yang Du; Jonas S Mortensen; Haoqing Wang; Andreas Nygaard; Lubna Ghani; Claus J Loland; Brian K Kobilka; Bernadette Byrne; Lan Guan; Pil Seok Chae
Journal:  ACS Chem Biol       Date:  2020-06-05       Impact factor: 5.100

7.  Diastereomeric Cyclopentane-Based Maltosides (CPMs) as Tools for Membrane Protein Study.

Authors:  Manabendra Das; Florian Mahler; Parameswaran Hariharan; Haoqing Wang; Yang Du; Jonas S Mortensen; Eugenio Pérez Patallo; Lubna Ghani; David Glück; Ho Jin Lee; Bernadette Byrne; Claus J Loland; Lan Guan; Brian K Kobilka; Sandro Keller; Pil Seok Chae
Journal:  J Am Chem Soc       Date:  2020-12-14       Impact factor: 15.419

8.  1,3,5-Triazine-Cored Maltoside Amphiphiles for Membrane Protein Extraction and Stabilization.

Authors:  Lubna Ghani; Chastine F Munk; Xiang Zhang; Satoshi Katsube; Yang Du; Cristina Cecchetti; Weijiao Huang; Hyoung Eun Bae; Savvas Saouros; Muhammad Ehsan; Lan Guan; Xiangyu Liu; Claus J Loland; Brian K Kobilka; Bernadette Byrne; Pil Seok Chae
Journal:  J Am Chem Soc       Date:  2019-12-06       Impact factor: 15.419

9.  Highly Branched Pentasaccharide-Bearing Amphiphiles for Membrane Protein Studies.

Authors:  Muhammad Ehsan; Yang Du; Nicola J Scull; Elena Tikhonova; Jeffrey Tarrasch; Jonas S Mortensen; Claus J Loland; Georgios Skiniotis; Lan Guan; Bernadette Byrne; Brian K Kobilka; Pil Seok Chae
Journal:  J Am Chem Soc       Date:  2016-03-11       Impact factor: 15.419

10.  Rationally Engineered Tandem Facial Amphiphiles for Improved Membrane Protein Stabilization Efficacy.

Authors:  Manabendra Das; Yang Du; Jonas S Mortensen; Parameswaran Hariharan; Hyun Sung Lee; Bernadette Byrne; Claus J Loland; Lan Guan; Brian K Kobilka; Pil Seok Chae
Journal:  Chembiochem       Date:  2018-09-21       Impact factor: 3.164

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