Literature DB >> 26966956

Highly Branched Pentasaccharide-Bearing Amphiphiles for Membrane Protein Studies.

Muhammad Ehsan1, Yang Du2, Nicola J Scull3, Elena Tikhonova4, Jeffrey Tarrasch5, Jonas S Mortensen6, Claus J Loland6, Georgios Skiniotis5, Lan Guan4, Bernadette Byrne3, Brian K Kobilka2, Pil Seok Chae1.   

Abstract

Detergents are essential tools for membrane protein manipulation. Micelles formed by detergent molecules have the ability to encapsulate the hydrophobic domains of membrane proteins. The resulting protein-detergent complexes (PDCs) are compatible with the polar environments of aqueous media, making structural and functional analysis feasible. Although a number of novel agents have been developed to overcome the limitations of conventional detergents, most have traditional head groups such as glucoside or maltoside. In this study, we introduce a class of amphiphiles, the PSA/Es with a novel highly branched pentasaccharide hydrophilic group. The PSA/Es conferred markedly increased stability to a diverse range of membrane proteins compared to conventional detergents, indicating a positive role for the new hydrophilic group in maintaining the native protein integrity. In addition, PDCs formed by PSA/Es were smaller and more suitable for electron microscopic analysis than those formed by DDM, indicating that the new agents have significant potential for the structure-function studies of membrane proteins.

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Year:  2016        PMID: 26966956      PMCID: PMC4906958          DOI: 10.1021/jacs.5b13233

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  59 in total

Review 1.  Detergents for the stabilization and crystallization of membrane proteins.

Authors:  Gilbert G Privé
Journal:  Methods       Date:  2007-04       Impact factor: 3.608

2.  Tandem facial amphiphiles for membrane protein stabilization.

Authors:  Pil Seok Chae; Kamil Gotfryd; Jennifer Pacyna; Larry J W Miercke; Søren G F Rasmussen; Rebecca A Robbins; Rohini R Rana; Claus J Loland; Brian Kobilka; Robert Stroud; Bernadette Byrne; Ulrik Gether; Samuel H Gellman
Journal:  J Am Chem Soc       Date:  2010-11-04       Impact factor: 15.419

3.  The structure and catalytic cycle of a sodium-pumping pyrophosphatase.

Authors:  Juho Kellosalo; Tommi Kajander; Konstantin Kogan; Kisun Pokharel; Adrian Goldman
Journal:  Science       Date:  2012-07-27       Impact factor: 47.728

4.  A new class of amphiphiles bearing rigid hydrophobic groups for solubilization and stabilization of membrane proteins.

Authors:  Pil Seok Chae; Søren G F Rasmussen; Rohini R Rana; Kamil Gotfryd; Andrew C Kruse; Aashish Manglik; Kyung Ho Cho; Shailika Nurva; Ulrik Gether; Lan Guan; Claus J Loland; Bernadette Byrne; Brian K Kobilka; Samuel H Gellman
Journal:  Chemistry       Date:  2012-06-22       Impact factor: 5.236

5.  Mapping proximity within proteins using fluorescence spectroscopy. A study of T4 lysozyme showing that tryptophan residues quench bimane fluorescence.

Authors:  Steven E Mansoor; Hassane S McHaourab; David L Farrens
Journal:  Biochemistry       Date:  2002-02-26       Impact factor: 3.162

6.  Structural studies of the melibiose permease of Escherichia coli by fluorescence resonance energy transfer. I. Evidence for ion-induced conformational change.

Authors:  C Maehrel; E Cordat; I Mus-Veteau; G Leblanc
Journal:  J Biol Chem       Date:  1998-12-11       Impact factor: 5.157

7.  Crystal structure of a heterotetrameric NMDA receptor ion channel.

Authors:  Erkan Karakas; Hiro Furukawa
Journal:  Science       Date:  2014-05-30       Impact factor: 47.728

8.  Structure and dynamics of the M3 muscarinic acetylcholine receptor.

Authors:  Andrew C Kruse; Jianxin Hu; Albert C Pan; Daniel H Arlow; Daniel M Rosenbaum; Erica Rosemond; Hillary F Green; Tong Liu; Pil Seok Chae; Ron O Dror; David E Shaw; William I Weis; Jürgen Wess; Brian K Kobilka
Journal:  Nature       Date:  2012-02-22       Impact factor: 49.962

9.  Crystal structure of the β2 adrenergic receptor-Gs protein complex.

Authors:  Søren G F Rasmussen; Brian T DeVree; Yaozhong Zou; Andrew C Kruse; Ka Young Chung; Tong Sun Kobilka; Foon Sun Thian; Pil Seok Chae; Els Pardon; Diane Calinski; Jesper M Mathiesen; Syed T A Shah; Joseph A Lyons; Martin Caffrey; Samuel H Gellman; Jan Steyaert; Georgios Skiniotis; William I Weis; Roger K Sunahara; Brian K Kobilka
Journal:  Nature       Date:  2011-07-19       Impact factor: 49.962

10.  Adrenaline-activated structure of β2-adrenoceptor stabilized by an engineered nanobody.

Authors:  Aaron M Ring; Aashish Manglik; Andrew C Kruse; Michael D Enos; William I Weis; K Christopher Garcia; Brian K Kobilka
Journal:  Nature       Date:  2013-09-22       Impact factor: 49.962

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  28 in total

1.  Self-Assembly Behaviors of a Penta-Phenylene Maltoside and Its Application for Membrane Protein Study.

Authors:  Muhammad Ehsan; Ashwani Kumar; Jonas S Mortensen; Yang Du; Parameswaran Hariharan; Kaavya K Kumar; Betty Ha; Bernadette Byrne; Lan Guan; Brian K Kobilka; Claus J Loland; Pil Seok Chae
Journal:  Chem Asian J       Date:  2019-04-10

2.  Pendant-bearing glucose-neopentyl glycol (P-GNG) amphiphiles for membrane protein manipulation: Importance of detergent pendant chain for protein stabilization.

Authors:  Hyoung Eun Bae; Cristina Cecchetti; Yang Du; Satoshi Katsube; Jonas S Mortensen; Weijiao Huang; Shahid Rehan; Ho Jin Lee; Claus J Loland; Lan Guan; Brian K Kobilka; Bernadette Byrne; Pil Seok Chae
Journal:  Acta Biomater       Date:  2020-06-06       Impact factor: 8.947

3.  New penta-saccharide-bearing tripod amphiphiles for membrane protein structure studies.

Authors:  Muhammad Ehsan; Lubna Ghani; Yang Du; Parameswaran Hariharan; Jonas S Mortensen; Orquidea Ribeiro; Hongli Hu; Georgios Skiniotis; Claus J Loland; Lan Guan; Brian K Kobilka; Bernadette Byrne; Pil Seok Chae
Journal:  Analyst       Date:  2017-10-09       Impact factor: 4.616

4.  Mesitylene-Cored Glucoside Amphiphiles (MGAs) for Membrane Protein Studies: Importance of Alkyl Chain Density in Detergent Efficacy.

Authors:  Kyung Ho Cho; Orquidea Ribeiro; Yang Du; Elena Tikhonova; Jonas S Mortensen; Kelsey Markham; Parameswaran Hariharan; Claus J Loland; Lan Guan; Brian K Kobilka; Bernadette Byrne; Pil Seok Chae
Journal:  Chemistry       Date:  2016-11-17       Impact factor: 5.236

5.  Conformationally Preorganized Diastereomeric Norbornane-Based Maltosides for Membrane Protein Study: Implications of Detergent Kink for Micellar Properties.

Authors:  Manabendra Das; Yang Du; Orquidea Ribeiro; Parameswaran Hariharan; Jonas S Mortensen; Dhabaleswar Patra; Georgios Skiniotis; Claus J Loland; Lan Guan; Brian K Kobilka; Bernadette Byrne; Pil Seok Chae
Journal:  J Am Chem Soc       Date:  2017-02-20       Impact factor: 15.419

6.  Isomeric Detergent Comparison for Membrane Protein Stability: Importance of Inter-Alkyl-Chain Distance and Alkyl Chain Length.

Authors:  Kyung Ho Cho; Parameswaran Hariharan; Jonas S Mortensen; Yang Du; Anne K Nielsen; Bernadette Byrne; Brian K Kobilka; Claus J Loland; Lan Guan; Pil Seok Chae
Journal:  Chembiochem       Date:  2016-11-07       Impact factor: 3.164

7.  New Malonate-Derived Tetraglucoside Detergents for Membrane Protein Stability.

Authors:  Muhammad Ehsan; Satoshi Katsube; Cristina Cecchetti; Yang Du; Jonas S Mortensen; Haoqing Wang; Andreas Nygaard; Lubna Ghani; Claus J Loland; Brian K Kobilka; Bernadette Byrne; Lan Guan; Pil Seok Chae
Journal:  ACS Chem Biol       Date:  2020-06-05       Impact factor: 5.100

Review 8.  Chemical tools for membrane protein structural biology.

Authors:  Qinghai Zhang; Vadim Cherezov
Journal:  Curr Opin Struct Biol       Date:  2019-07-05       Impact factor: 6.809

9.  Diastereomeric Cyclopentane-Based Maltosides (CPMs) as Tools for Membrane Protein Study.

Authors:  Manabendra Das; Florian Mahler; Parameswaran Hariharan; Haoqing Wang; Yang Du; Jonas S Mortensen; Eugenio Pérez Patallo; Lubna Ghani; David Glück; Ho Jin Lee; Bernadette Byrne; Claus J Loland; Lan Guan; Brian K Kobilka; Sandro Keller; Pil Seok Chae
Journal:  J Am Chem Soc       Date:  2020-12-14       Impact factor: 15.419

10.  Rationally Engineered Tandem Facial Amphiphiles for Improved Membrane Protein Stabilization Efficacy.

Authors:  Manabendra Das; Yang Du; Jonas S Mortensen; Parameswaran Hariharan; Hyun Sung Lee; Bernadette Byrne; Claus J Loland; Lan Guan; Brian K Kobilka; Pil Seok Chae
Journal:  Chembiochem       Date:  2018-09-21       Impact factor: 3.164

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