Literature DB >> 28913526

New penta-saccharide-bearing tripod amphiphiles for membrane protein structure studies.

Muhammad Ehsan1, Lubna Ghani, Yang Du, Parameswaran Hariharan, Jonas S Mortensen, Orquidea Ribeiro, Hongli Hu, Georgios Skiniotis, Claus J Loland, Lan Guan, Brian K Kobilka, Bernadette Byrne, Pil Seok Chae.   

Abstract

Integral membrane proteins either alone or as complexes carry out a range of key cellular functions. Detergents are indispensable tools in the isolation of membrane proteins from biological membranes for downstream studies. Although a large number of techniques and tools, including a wide variety of detergents, are available, purification and structural characterization of many membrane proteins remain challenging. In the current study, a new class of tripod amphiphiles bearing two different penta-saccharide head groups, designated TPSs, were developed and evaluated for their ability to extract and stabilize a range of diverse membrane proteins. Variations in the structures of the detergent head and tail groups allowed us to prepare three sets of the novel agents with distinctive structures. Some TPSs (TPS-A8 and TPS-E7) were efficient at extracting two proteins in a functional state while others (TPS-E8 and TPS-E10L) conferred marked stability to all membrane proteins (and membrane protein complexes) tested here compared to a conventional detergent. Use of TPS-E10L led to clear visualization of a receptor-Gs complex using electron microscopy, indicating profound potential in membrane protein research.

Entities:  

Year:  2017        PMID: 28913526      PMCID: PMC5818263          DOI: 10.1039/c7an01168g

Source DB:  PubMed          Journal:  Analyst        ISSN: 0003-2654            Impact factor:   4.616


  74 in total

1.  Rigid Amphiphiles for Membrane Protein Manipulation.

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Journal:  Angew Chem Int Ed Engl       Date:  2000-02       Impact factor: 15.336

2.  Prediction of the human membrane proteome.

Authors:  Linn Fagerberg; Kalle Jonasson; Gunnar von Heijne; Mathias Uhlén; Lisa Berglund
Journal:  Proteomics       Date:  2010-03       Impact factor: 3.984

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Authors:  John P Overington; Bissan Al-Lazikani; Andrew L Hopkins
Journal:  Nat Rev Drug Discov       Date:  2006-12       Impact factor: 84.694

4.  Crystal structure of the human OX2 orexin receptor bound to the insomnia drug suvorexant.

Authors:  Jie Yin; Juan Carlos Mobarec; Peter Kolb; Daniel M Rosenbaum
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5.  K2P channel gating mechanisms revealed by structures of TREK-2 and a complex with Prozac.

Authors:  Yin Yao Dong; Ashley C W Pike; Alexandra Mackenzie; Conor McClenaghan; Prafulla Aryal; Liang Dong; Andrew Quigley; Mariana Grieben; Solenne Goubin; Shubhashish Mukhopadhyay; Gian Filippo Ruda; Michael V Clausen; Lishuang Cao; Paul E Brennan; Nicola A Burgess-Brown; Mark S P Sansom; Stephen J Tucker; Elisabeth P Carpenter
Journal:  Science       Date:  2015-03-13       Impact factor: 47.728

Review 6.  Voltage-gated potassium channels as therapeutic targets.

Authors:  Heike Wulff; Neil A Castle; Luis A Pardo
Journal:  Nat Rev Drug Discov       Date:  2009-12       Impact factor: 84.694

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Journal:  Nature       Date:  2002-11-21       Impact factor: 49.962

8.  Microscale fluorescent thermal stability assay for membrane proteins.

Authors:  Alexander I Alexandrov; Mauro Mileni; Ellen Y T Chien; Michael A Hanson; Raymond C Stevens
Journal:  Structure       Date:  2008-03       Impact factor: 5.006

9.  Activation and allosteric modulation of a muscarinic acetylcholine receptor.

Authors:  Andrew C Kruse; Aaron M Ring; Aashish Manglik; Jianxin Hu; Kelly Hu; Katrin Eitel; Harald Hübner; Els Pardon; Celine Valant; Patrick M Sexton; Arthur Christopoulos; Christian C Felder; Peter Gmeiner; Jan Steyaert; William I Weis; K Christopher Garcia; Jürgen Wess; Brian K Kobilka
Journal:  Nature       Date:  2013-11-20       Impact factor: 49.962

10.  A Class of Rigid Linker-bearing Glucosides for Membrane Protein Structural Study.

Authors:  Aiman Sadaf; Jonas S Mortensen; Stefano Capaldi; Elena Tikhonova; Parameswaran Hariharan; Orquidea de Castro Ribeiro; Claus J Loland; Lan Guan; Bernadette Byrne; Pil Seok Chae
Journal:  Chem Sci       Date:  2015-12-16       Impact factor: 9.825

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  3 in total

1.  1,3,5-Triazine-Cored Maltoside Amphiphiles for Membrane Protein Extraction and Stabilization.

Authors:  Lubna Ghani; Chastine F Munk; Xiang Zhang; Satoshi Katsube; Yang Du; Cristina Cecchetti; Weijiao Huang; Hyoung Eun Bae; Savvas Saouros; Muhammad Ehsan; Lan Guan; Xiangyu Liu; Claus J Loland; Brian K Kobilka; Bernadette Byrne; Pil Seok Chae
Journal:  J Am Chem Soc       Date:  2019-12-06       Impact factor: 15.419

2.  Steroid-Based Amphiphiles for Membrane Protein Study: The Importance of Alkyl Spacers for Protein Stability.

Authors:  Muhammad Ehsan; Manabendra Das; Valerie Stern; Yang Du; Jonas S Mortensen; Parameswaran Hariharan; Bernadette Byrne; Claus J Loland; Brian K Kobilka; Lan Guan; Pil Seok Chae
Journal:  Chembiochem       Date:  2018-05-29       Impact factor: 3.164

3.  Development of 1,3-acetonedicarboxylate-derived glucoside amphiphiles (ACAs) for membrane protein study.

Authors:  Ho Jin Lee; Muhammad Ehsan; Xiang Zhang; Satoshi Katsube; Chastine F Munk; Haoqing Wang; Waqar Ahmed; Ashwani Kumar; Bernadette Byrne; Claus J Loland; Lan Guan; Xiangyu Liu; Pil Seok Chae
Journal:  Chem Sci       Date:  2022-04-19       Impact factor: 9.969

  3 in total

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