Literature DB >> 33315387

Diastereomeric Cyclopentane-Based Maltosides (CPMs) as Tools for Membrane Protein Study.

Manabendra Das1,2, Florian Mahler2, Parameswaran Hariharan3, Haoqing Wang4, Yang Du4, Jonas S Mortensen5, Eugenio Pérez Patallo2, Lubna Ghani1, David Glück2, Ho Jin Lee1, Bernadette Byrne6, Claus J Loland5, Lan Guan3, Brian K Kobilka4, Sandro Keller2,7,8,9, Pil Seok Chae1.   

Abstract

Amphiphilic agents, called detergents, are invaluable tools for studying membrane proteins. However, membrane proteins encapsulated by conventional head-to-tail detergents tend to denature or aggregate, necessitating the development of structurally distinct molecules with improved efficacy. Here, a novel class of diastereomeric detergents with a cyclopentane core unit, designated cyclopentane-based maltosides (CPMs), were prepared and evaluated for their ability to solubilize and stabilize several model membrane proteins. A couple of CPMs displayed enhanced behavior compared with the benchmark conventional detergent, n-dodecyl-β-d-maltoside (DDM), for all the tested membrane proteins including two G-protein-coupled receptors (GPCRs). Furthermore, CPM-C12 was notable for its ability to confer enhanced membrane protein stability compared with the previously developed conformationally rigid NBMs [J. Am. Chem. Soc. 2017, 139, 3072] and LMNG. The effect of the individual CPMs on protein stability varied depending on both the detergent configuration (cis/trans) and alkyl chain length, allowing us draw conclusions on the detergent structure-property-efficacy relationship. Thus, this study not only provides novel detergent tools useful for membrane protein research but also reports on structural features of the detergents critical for detergent efficacy in stabilizing membrane proteins.

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Year:  2020        PMID: 33315387      PMCID: PMC8015409          DOI: 10.1021/jacs.0c09629

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  74 in total

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Journal:  Nat Chem Biol       Date:  2006-06-25       Impact factor: 15.040

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Authors:  Pil Seok Chae; Kamil Gotfryd; Jennifer Pacyna; Larry J W Miercke; Søren G F Rasmussen; Rebecca A Robbins; Rohini R Rana; Claus J Loland; Brian Kobilka; Robert Stroud; Bernadette Byrne; Ulrik Gether; Samuel H Gellman
Journal:  J Am Chem Soc       Date:  2010-11-04       Impact factor: 15.419

4.  Amphipols from A to Z.

Authors:  J-L Popot; T Althoff; D Bagnard; J-L Banères; P Bazzacco; E Billon-Denis; L J Catoire; P Champeil; D Charvolin; M J Cocco; G Crémel; T Dahmane; L M de la Maza; C Ebel; F Gabel; F Giusti; Y Gohon; E Goormaghtigh; E Guittet; J H Kleinschmidt; W Kühlbrandt; C Le Bon; K L Martinez; M Picard; B Pucci; J N Sachs; C Tribet; C van Heijenoort; F Wien; F Zito; M Zoonens
Journal:  Annu Rev Biophys       Date:  2011       Impact factor: 12.981

5.  Crystal structure of a bacterial homologue of Na+/Cl--dependent neurotransmitter transporters.

Authors:  Atsuko Yamashita; Satinder K Singh; Toshimitsu Kawate; Yan Jin; Eric Gouaux
Journal:  Nature       Date:  2005-07-24       Impact factor: 49.962

6.  An Engineered Lithocholate-Based Facial Amphiphile Stabilizes Membrane Proteins: Assessing the Impact of Detergent Customizability on Protein Stability.

Authors:  Manabendra Das; Yang Du; Jonas S Mortensen; Hyoung Eun Bae; Bernadette Byrne; Claus J Loland; Brian K Kobilka; Pil Seok Chae
Journal:  Chemistry       Date:  2018-06-13       Impact factor: 5.236

7.  Highly Branched Pentasaccharide-Bearing Amphiphiles for Membrane Protein Studies.

Authors:  Muhammad Ehsan; Yang Du; Nicola J Scull; Elena Tikhonova; Jeffrey Tarrasch; Jonas S Mortensen; Claus J Loland; Georgios Skiniotis; Lan Guan; Bernadette Byrne; Brian K Kobilka; Pil Seok Chae
Journal:  J Am Chem Soc       Date:  2016-03-11       Impact factor: 15.419

8.  Applications of phospholipid bilayer nanodiscs in the study of membranes and membrane proteins.

Authors:  Abhinav Nath; William M Atkins; Stephen G Sligar
Journal:  Biochemistry       Date:  2007-01-31       Impact factor: 3.162

9.  Glycosyl-Substituted Dicarboxylates as Detergents for the Extraction, Overstabilization, and Crystallization of Membrane Proteins.

Authors:  Kim-Anh Nguyen; Marine Peuchmaur; Sandrine Magnard; Romain Haudecoeur; Cédric Boyère; Saravanan Mounien; Ikram Benammar; Veronica Zampieri; Sébastien Igonet; Vincent Chaptal; Anass Jawhari; Ahcène Boumendjel; Pierre Falson
Journal:  Angew Chem Int Ed Engl       Date:  2018-02-13       Impact factor: 15.336

10.  Structure and mechanism of an active lipid-linked oligosaccharide flippase.

Authors:  Camilo Perez; Sabina Gerber; Jérémy Boilevin; Monika Bucher; Tamis Darbre; Markus Aebi; Jean-Louis Reymond; Kaspar P Locher
Journal:  Nature       Date:  2015-08-12       Impact factor: 49.962

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  3 in total

1.  Glyco-Steroidal Amphiphiles (GSAs) for Membrane Protein Structural Study.

Authors:  Muhammad Ehsan; Haoqing Wang; Satoshi Katsube; Chastine F Munk; Yang Du; Taeyeol Youn; Soyoung Yoon; Bernadette Byrne; Claus J Loland; Lan Guan; Brian K Kobilka; Pil Seok Chae
Journal:  Chembiochem       Date:  2022-02-21       Impact factor: 3.164

2.  Foldable Detergents for Membrane Protein Study: Importance of Detergent Core Flexibility in Protein Stabilization.

Authors:  Lubna Ghani; Seonghoon Kim; Haoqing Wang; Hyun Sung Lee; Jonas S Mortensen; Satoshi Katsube; Yang Du; Aiman Sadaf; Waqar Ahmed; Bernadette Byrne; Lan Guan; Claus J Loland; Brian K Kobilka; Wonpil Im; Pil Seok Chae
Journal:  Chemistry       Date:  2022-03-15       Impact factor: 5.236

3.  Development of 1,3-acetonedicarboxylate-derived glucoside amphiphiles (ACAs) for membrane protein study.

Authors:  Ho Jin Lee; Muhammad Ehsan; Xiang Zhang; Satoshi Katsube; Chastine F Munk; Haoqing Wang; Waqar Ahmed; Ashwani Kumar; Bernadette Byrne; Claus J Loland; Lan Guan; Xiangyu Liu; Pil Seok Chae
Journal:  Chem Sci       Date:  2022-04-19       Impact factor: 9.969

  3 in total

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