Literature DB >> 28090246

Bayesian Covariate Selection in Mixed-Effects Models For Longitudinal Shape Analysis.

Prasanna Muralidharan1, James Fishbaugh2, Eun Young Kim3, Hans J Johnson3, Jane S Paulsen3, Guido Gerig2, P Thomas Fletcher1.   

Abstract

The goal of longitudinal shape analysis is to understand how anatomical shape changes over time, in response to biological processes, including growth, aging, or disease. In many imaging studies, it is also critical to understand how these shape changes are affected by other factors, such as sex, disease diagnosis, IQ, etc. Current approaches to longitudinal shape analysis have focused on modeling age-related shape changes, but have not included the ability to handle covariates. In this paper, we present a novel Bayesian mixed-effects shape model that incorporates simultaneous relationships between longitudinal shape data and multiple predictors or covariates to the model. Moreover, we place an Automatic Relevance Determination (ARD) prior on the parameters, that lets us automatically select which covariates are most relevant to the model based on observed data. We evaluate our proposed model and inference procedure on a longitudinal study of Huntington's disease from PREDICT-HD. We first show the utility of the ARD prior for model selection in a univariate modeling of striatal volume, and next we apply the full high-dimensional longitudinal shape model to putamen shapes.

Entities:  

Keywords:  Bayesian analysis; Huntington's disease; Longitudinal shape analysis; model selection

Year:  2016        PMID: 28090246      PMCID: PMC5225990          DOI: 10.1109/ISBI.2016.7493352

Source DB:  PubMed          Journal:  Proc IEEE Int Symp Biomed Imaging        ISSN: 1945-7928


  9 in total

1.  Time sequence diffeomorphic metric mapping and parallel transport track time-dependent shape changes.

Authors:  Anqi Qiu; Marilyn Albert; Laurent Younes; Michael I Miller
Journal:  Neuroimage       Date:  2008-11-07       Impact factor: 6.556

2.  Random-effects models for longitudinal data.

Authors:  N M Laird; J H Ware
Journal:  Biometrics       Date:  1982-12       Impact factor: 2.571

3.  Toward a comprehensive framework for the spatiotemporal statistical analysis of longitudinal shape data.

Authors:  S Durrleman; X Pennec; A Trouvé; J Braga; G Gerig; N Ayache
Journal:  Int J Comput Vis       Date:  2013-05       Impact factor: 7.410

4.  Sasaki Metrics for Analysis of Longitudinal Data on Manifolds.

Authors:  Prasanna Muralidharan; P Thomas Fletcher
Journal:  Proc IEEE Comput Soc Conf Comput Vis Pattern Recognit       Date:  2012-06

5.  Sparse Variational Analysis of Linear Mixed Models for Large Data Sets.

Authors:  Artin Armagan; David Dunson
Journal:  Stat Probab Lett       Date:  2011-08-01       Impact factor: 0.870

6.  Mixed-Effects Shape Models for Estimating Longitudinal Changes in Anatomy.

Authors:  Manasi Datar; Prasanna Muralidharan; Abhishek Kumar; Sylvain Gouttard; Joseph Piven; Guido Gerig; Ross Whitaker; P Thomas Fletcher
Journal:  Spatiotemporal Image Anal Longitud Time Ser Image Data (2012)       Date:  2012-10

7.  Diffeomorphic shape trajectories for improved longitudinal segmentation and statistics.

Authors:  Prasanna Muralidharan; James Fishbaugh; Hans J Johnson; Stanley Durrleman; Jane S Paulsen; Guido Gerig; P Thomas Fletcher
Journal:  Med Image Comput Comput Assist Interv       Date:  2014

8.  Linear mixed models for longitudinal shape data with applications to facial modeling.

Authors:  Sarah J E Barry; Adrian W Bowman
Journal:  Biostatistics       Date:  2008-02-05       Impact factor: 5.899

9.  Association between Age and Striatal Volume Stratified by CAG Repeat Length in Prodromal Huntington Disease.

Authors:  Elizabeth Aylward; James Mills; Dawei Liu; Peggy Nopoulos; Christopher A Ross; Ronald Pierson; Jane S Paulsen
Journal:  PLoS Curr       Date:  2011-05-11
  9 in total
  1 in total

1.  Longitudinal modeling of appearance and shape and its potential for clinical use.

Authors:  Guido Gerig; James Fishbaugh; Neda Sadeghi
Journal:  Med Image Anal       Date:  2016-06-15       Impact factor: 8.545

  1 in total

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