Literature DB >> 29430166

Riemannian Nonlinear Mixed Effects Models: Analyzing Longitudinal Deformations in Neuroimaging.

Hyunwoo J Kim1, Nagesh Adluru1, Heemanshu Suri1, Baba C Vemuri2, Sterling C Johnson1, Vikas Singh1.   

Abstract

Statistical machine learning models that operate on manifold-valued data are being extensively studied in vision, motivated by applications in activity recognition, feature tracking and medical imaging. While non-parametric methods have been relatively well studied in the literature, efficient formulations for parametric models (which may offer benefits in small sample size regimes) have only emerged recently. So far, manifold-valued regression models (such as geodesic regression) are restricted to the analysis of cross-sectional data, i.e., the so-called "fixed effects" in statistics. But in most "longitudinal analysis" (e.g., when a participant provides multiple measurements, over time) the application of fixed effects models is problematic. In an effort to answer this need, this paper generalizes non-linear mixed effects model to the regime where the response variable is manifold-valued, i.e., f : Rd → ℳ. We derive the underlying model and estimation schemes and demonstrate the immediate benefits such a model can provide - both for group level and individual level analysis - on longitudinal brain imaging data. The direct consequence of our results is that longitudinal analysis of manifold-valued measurements (especially, the symmetric positive definite manifold) can be conducted in a computationally tractable manner.

Entities:  

Year:  2017        PMID: 29430166      PMCID: PMC5805155          DOI: 10.1109/CVPR.2017.612

Source DB:  PubMed          Journal:  Proc IEEE Comput Soc Conf Comput Vis Pattern Recognit        ISSN: 1063-6919


  26 in total

1.  Principal geodesic analysis for the study of nonlinear statistics of shape.

Authors:  P Thomas Fletcher; Conglin Lu; Stephen M Pizer; Sarang Joshi
Journal:  IEEE Trans Med Imaging       Date:  2004-08       Impact factor: 10.048

2.  Geodesic regression for image time-series.

Authors:  Marc Niethammer; Yang Huang; François-Xavier Vialard
Journal:  Med Image Comput Comput Assist Interv       Date:  2011

3.  Pedestrian detection via classification on Riemannian manifolds.

Authors:  Oncel Tuzel; Fatih Porikli; Peter Meer
Journal:  IEEE Trans Pattern Anal Mach Intell       Date:  2008-10       Impact factor: 6.226

4.  On A Nonlinear Generalization of Sparse Coding and Dictionary Learning.

Authors:  Yuchen Xie; Jeffrey Ho; Baba Vemuri
Journal:  JMLR Workshop Conf Proc       Date:  2013

5.  A hierarchical geodesic model for diffeomorphic longitudinal shape analysis.

Authors:  Nikhil Singh; Jacob Hinkle; Sarang Joshi; P Thomas Fletcher
Journal:  Inf Process Med Imaging       Date:  2013

6.  Multivariate General Linear Models (MGLM) on Riemannian Manifolds with Applications to Statistical Analysis of Diffusion Weighted Images.

Authors:  Hyunwoo J Kim; Nagesh Adluru; Maxwell D Collins; Moo K Chung; Barbara B Bendlin; Sterling C Johnson; Richard J Davidson; Vikas Singh
Journal:  Proc IEEE Comput Soc Conf Comput Vis Pattern Recognit       Date:  2014-06-23

7.  Random-effects models for longitudinal data.

Authors:  N M Laird; J H Ware
Journal:  Biometrics       Date:  1982-12       Impact factor: 2.571

8.  Unbiased diffeomorphic atlas construction for computational anatomy.

Authors:  S Joshi; Brad Davis; Matthieu Jomier; Guido Gerig
Journal:  Neuroimage       Date:  2004       Impact factor: 6.556

9.  Manifold-valued Dirichlet Processes.

Authors:  Hyunwoo J Kim; Jia Xu; Baba C Vemuri; Vikas Singh
Journal:  JMLR Workshop Conf Proc       Date:  2015-07

10.  Segmentation of high angular resolution diffusion MRI using sparse riemannian manifold clustering.

Authors:  H Ertan Çetingül; Margaret J Wright; Paul M Thompson; René Vidal
Journal:  IEEE Trans Med Imaging       Date:  2013-10-03       Impact factor: 10.048

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  7 in total

1.  Hierarchical geodesic modeling on the diffusion orientation distribution function for longitudinal DW-MRI analysis.

Authors:  Heejong Kim; Sungmin Hong; Martin Styner; Joseph Piven; Kelly Botteron; Guido Gerig
Journal:  Med Image Comput Comput Assist Interv       Date:  2020-09-29

2.  Dilated Convolutional Neural Networks for Sequential Manifold-valued Data.

Authors:  Xingjian Zhen; Rudrasis Chakraborty; Nicholas Vogt; Barbara B Bendlin; Vikas Singh
Journal:  Proc IEEE Int Conf Comput Vis       Date:  2020-02-27

3.  On Training Deep 3D CNN Models with Dependent Samples in Neuroimaging.

Authors:  Yunyang Xiong; Hyunwoo J Kim; Bhargav Tangirala; Ronak Mehta; Sterling C Johnson; Vikas Singh
Journal:  Inf Process Med Imaging       Date:  2019-05-22

4.  Hierarchical Multi-Geodesic Model for Longitudinal Analysis of Temporal Trajectories of Anatomical Shape and Covariates.

Authors:  Sungmin Hong; James Fishbaugh; Jason J Wolff; Martin A Styner; Guido Gerig
Journal:  Med Image Comput Comput Assist Interv       Date:  2019-10-10

5.  A geometric framework for statistical analysis of trajectories with distinct temporal spans.

Authors:  Rudrasis Chakraborty; Vikas Singh; Nagesh Adluru; Baba C Vemuri
Journal:  Proc IEEE Int Conf Comput Vis       Date:  2017-12-25

6.  A Natural Language Interface for Dissemination of Reproducible Biomedical Data Science.

Authors:  Rogers Jeffrey Leo John; Jignesh M Patel; Andrew L Alexander; Vikas Singh; Nagesh Adluru
Journal:  Med Image Comput Comput Assist Interv       Date:  2018-09-13

Review 7.  Statistical model for dynamically-changing correlation matrices with application to brain connectivity.

Authors:  Shih-Gu Huang; S Balqis Samdin; Chee-Ming Ting; Hernando Ombao; Moo K Chung
Journal:  J Neurosci Methods       Date:  2019-11-21       Impact factor: 2.390

  7 in total

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