Literature DB >> 26855978

Predictive Modeling of Anatomy with Genetic and Clinical Data.

Adrian V Dalca1, Ramesh Sridharan1, Mert R Sabuncu2, Polina Golland1.   

Abstract

We present a semi-parametric generative model for predicting anatomy of a patient in subsequent scans following a single baseline image. Such predictive modeling promises to facilitate novel analyses in both voxel-level studies and longitudinal biomarker evaluation. We capture anatomical change through a combination of population-wide regression and a non-parametric model of the subject's health based on individual genetic and clinical indicators. In contrast to classical correlation and longitudinal analysis, we focus on predicting new observations from a single subject observation. We demonstrate prediction of follow-up anatomical scans in the ADNI cohort, and illustrate a novel analysis approach that compares a patient's scans to the predicted subject-specific healthy anatomical trajectory.

Entities:  

Year:  2015        PMID: 26855978      PMCID: PMC4739840          DOI: 10.1007/978-3-319-24574-4_62

Source DB:  PubMed          Journal:  Med Image Comput Comput Assist Interv


  10 in total

1.  Semiparametric regression of multidimensional genetic pathway data: least-squares kernel machines and linear mixed models.

Authors:  Dawei Liu; Xihong Lin; Debashis Ghosh
Journal:  Biometrics       Date:  2007-12       Impact factor: 2.571

2.  Baseline and longitudinal patterns of brain atrophy in MCI patients, and their use in prediction of short-term conversion to AD: results from ADNI.

Authors:  Chandan Misra; Yong Fan; Christos Davatzikos
Journal:  Neuroimage       Date:  2008-11-05       Impact factor: 6.556

3.  ESTIMATING RELATEDNESS USING GENETIC MARKERS.

Authors:  David C Queller; Keith F Goodnight
Journal:  Evolution       Date:  1989-03       Impact factor: 3.694

Review 4.  FreeSurfer.

Authors:  Bruce Fischl
Journal:  Neuroimage       Date:  2012-01-10       Impact factor: 6.556

5.  Toward a comprehensive framework for the spatiotemporal statistical analysis of longitudinal shape data.

Authors:  S Durrleman; X Pennec; A Trouvé; J Braga; G Gerig; N Ayache
Journal:  Int J Comput Vis       Date:  2013-05       Impact factor: 7.410

6.  MULTIVARIATE MODELING OF LONGITUDINAL MRI IN EARLY BRAIN DEVELOPMENT WITH CONFIDENCE MEASURES.

Authors:  Neda Sadeghi; Marcel Prastawa; P Thomas Fletcher; Clement Vachet; Bo Wang; John Gilmore; Guido Gerig
Journal:  Proc IEEE Int Symp Biomed Imaging       Date:  2013

7.  A reproducible evaluation of ANTs similarity metric performance in brain image registration.

Authors:  Brian B Avants; Nicholas J Tustison; Gang Song; Philip A Cook; Arno Klein; James C Gee
Journal:  Neuroimage       Date:  2010-09-17       Impact factor: 6.556

8.  A kernel machine method for detecting effects of interaction between multidimensional variable sets: an imaging genetics application.

Authors:  Jordan W Smoller; Mert R Sabuncu; Tian Ge; Thomas E Nichols; Debashis Ghosh; Elizabeth C Mormino
Journal:  Neuroimage       Date:  2015-01-16       Impact factor: 6.556

9.  Variation in longitudinal trajectories of regional brain volumes of healthy men and women (ages 10 to 85 years) measured with atlas-based parcellation of MRI.

Authors:  Adolf Pfefferbaum; Torsten Rohlfing; Margaret J Rosenbloom; Weiwei Chu; Ian M Colrain; Edith V Sullivan
Journal:  Neuroimage       Date:  2012-10-12       Impact factor: 6.556

10.  The Alzheimer's Disease Neuroimaging Initiative (ADNI): MRI methods.

Authors:  Clifford R Jack; Matt A Bernstein; Nick C Fox; Paul Thompson; Gene Alexander; Danielle Harvey; Bret Borowski; Paula J Britson; Jennifer L Whitwell; Chadwick Ward; Anders M Dale; Joel P Felmlee; Jeffrey L Gunter; Derek L G Hill; Ron Killiany; Norbert Schuff; Sabrina Fox-Bosetti; Chen Lin; Colin Studholme; Charles S DeCarli; Gunnar Krueger; Heidi A Ward; Gregory J Metzger; Katherine T Scott; Richard Mallozzi; Daniel Blezek; Joshua Levy; Josef P Debbins; Adam S Fleisher; Marilyn Albert; Robert Green; George Bartzokis; Gary Glover; John Mugler; Michael W Weiner
Journal:  J Magn Reson Imaging       Date:  2008-04       Impact factor: 4.813

  10 in total
  1 in total

1.  A Bayesian Disease Progression Model for Clinical Trajectories.

Authors:  Yingying Zhu; Mert R Sabuncu
Journal:  Graphs Biomed Image Anal Integr Med Imaging Nonimaging Modalities (2018)       Date:  2018-09-16
  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.