Literature DB >> 23901883

The conformation of P450cam in complex with putidaredoxin is dependent on oxidation state.

William K Myers1, Young-Tae Lee, R David Britt, David B Goodin.   

Abstract

Double electron-electron resonance (DEER) spectroscopy was used to determine the conformational state in solution for the heme monooxygenase P450cam when bound to its natural redox partner, putidaredoxin (Pdx). When oxidized Pdx was titrated into substrate-bound ferric P450cam, the enzyme shifted from the closed to the open conformation. In sharp contrast, however, the enzyme remained in the closed conformation when ferrous-CO P450cam was titrated with reduced Pdx. This result fully supports the proposal that binding of oxidized Pdx to P450cam opposes the open-to-closed transition induced by substrate binding. However, the data strongly suggest that in solution, binding of reduced Pdx to P450cam does not favor the open conformation. This supports a model in which substrate recognition is associated with the open-to-closed transition and electron transfer from Pdx occurs in the closed conformation. The opening of the enzyme in the ferric-hydroperoxo state following electron transfer from Pdx would provide for efficient O2 bond activation, substrate oxidation, and product release.

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Year:  2013        PMID: 23901883      PMCID: PMC3785405          DOI: 10.1021/ja405751z

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  34 in total

1.  Cytochrome P450 compound I: capture, characterization, and C-H bond activation kinetics.

Authors:  Jonathan Rittle; Michael T Green
Journal:  Science       Date:  2010-11-12       Impact factor: 47.728

2.  Direct observation of a novel perturbed oxyferrous catalytic intermediate during reduced putidaredoxin-initiated turnover of cytochrome P-450-CAM: probing the effector role of putidaredoxin in catalysis.

Authors:  Mary C Glascock; David P Ballou; John H Dawson
Journal:  J Biol Chem       Date:  2005-08-22       Impact factor: 5.157

Review 3.  Structure and chemistry of cytochrome P450.

Authors:  Ilia G Denisov; Thomas M Makris; Stephen G Sligar; Ilme Schlichting
Journal:  Chem Rev       Date:  2005-06       Impact factor: 60.622

4.  A structure-based model for cytochrome P450cam-putidaredoxin interactions.

Authors:  T C Pochapsky; T A Lyons; S Kazanis; T Arakaki; G Ratnaswamy
Journal:  Biochimie       Date:  1996       Impact factor: 4.079

5.  Double electron-electron resonance shows cytochrome P450cam undergoes a conformational change in solution upon binding substrate.

Authors:  Stefan Stoll; Young-Tae Lee; Mo Zhang; Richard F Wilson; R David Britt; David B Goodin
Journal:  Proc Natl Acad Sci U S A       Date:  2012-07-23       Impact factor: 11.205

6.  Putidaredoxin-cytochrome p450cam interaction. Spin state of the heme iron modulates putidaredoxin structure.

Authors:  H Shimada; S Nagano; Y Ariga; M Unno; T Egawa; T Hishiki; Y Ishimura; F Masuya; T Obata; H Hori
Journal:  J Biol Chem       Date:  1999-04-02       Impact factor: 5.157

7.  Complex formation of cytochrome P450cam with Putidaredoxin. Evidence for protein-specific interactions involving the proximal thiolate ligand.

Authors:  Masashi Unno; James F Christian; Theodore Sjodin; David E Benson; Iain D G Macdonald; Stephen G Sligar; Paul M Champion
Journal:  J Biol Chem       Date:  2001-11-12       Impact factor: 5.157

8.  The cytochrome p450 homepage.

Authors:  David R Nelson
Journal:  Hum Genomics       Date:  2009-10       Impact factor: 4.639

9.  Structural and dynamic implications of an effector-induced backbone amide cis-trans isomerization in cytochrome P450cam.

Authors:  Eliana K Asciutto; Jeffry D Madura; Susan Sondej Pochapsky; Bo OuYang; Thomas C Pochapsky
Journal:  J Mol Biol       Date:  2009-03-24       Impact factor: 5.469

10.  Solution NMR structure of putidaredoxin-cytochrome P450cam complex via a combined residual dipolar coupling-spin labeling approach suggests a role for Trp106 of putidaredoxin in complex formation.

Authors:  Wei Zhang; Susan S Pochapsky; Thomas C Pochapsky; Nitin U Jain
Journal:  J Mol Biol       Date:  2008-09-20       Impact factor: 5.469

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  18 in total

1.  Delicate conformational balance of the redox enzyme cytochrome P450cam.

Authors:  Simon P Skinner; Wei-Min Liu; Yoshitaka Hiruma; Monika Timmer; Anneloes Blok; Mathias A S Hass; Marcellus Ubbink
Journal:  Proc Natl Acad Sci U S A       Date:  2015-06-30       Impact factor: 11.205

2.  Identification of productive and futile encounters in an electron transfer protein complex.

Authors:  Witold Andrałojć; Yoshitaka Hiruma; Wei-Min Liu; Enrico Ravera; Masaki Nojiri; Giacomo Parigi; Claudio Luchinat; Marcellus Ubbink
Journal:  Proc Natl Acad Sci U S A       Date:  2017-02-21       Impact factor: 11.205

3.  Examining how enzymes self-organize in a membrane.

Authors:  Thomas C Pochapsky
Journal:  Proc Natl Acad Sci U S A       Date:  2014-02-24       Impact factor: 11.205

4.  Conformational selectivity in cytochrome P450 redox partner interactions.

Authors:  Scott A Hollingsworth; Dipanwita Batabyal; Brian D Nguyen; Thomas L Poulos
Journal:  Proc Natl Acad Sci U S A       Date:  2016-07-20       Impact factor: 11.205

5.  Effect of Redox Partner Binding on Cytochrome P450 Conformational Dynamics.

Authors:  Dipanwita Batabyal; Logan S Richards; Thomas L Poulos
Journal:  J Am Chem Soc       Date:  2017-09-07       Impact factor: 15.419

6.  A Comparative Analysis of the Effector Role of Redox Partner Binding in Bacterial P450s.

Authors:  Dipanwita Batabyal; Ariel Lewis-Ballester; Syun-Ru Yeh; Thomas L Poulos
Journal:  Biochemistry       Date:  2016-11-15       Impact factor: 3.162

7.  An Intermediate Conformational State of Cytochrome P450cam-CN in Complex with Putidaredoxin.

Authors:  Shih-Wei Chuo; Lee-Ping Wang; R David Britt; David B Goodin
Journal:  Biochemistry       Date:  2019-04-26       Impact factor: 3.162

8.  Use of Phenoxyaniline Analogues To Generate Biochemical Insights into the Interactio n of Polybrominated Diphenyl Ether with CYP2B Enzymes.

Authors:  Chao Chen; Jingbao Liu; James R Halpert; P Ross Wilderman
Journal:  Biochemistry       Date:  2017-12-19       Impact factor: 3.162

9.  Effect of redox partner binding on CYP101D1 conformational dynamics.

Authors:  Dipanwita Batabyal; Thomas L Poulos
Journal:  J Inorg Biochem       Date:  2018-03-01       Impact factor: 4.155

10.  Molecular dynamics of the P450cam-Pdx complex reveals complex stability and novel interface contacts.

Authors:  Scott A Hollingsworth; Thomas L Poulos
Journal:  Protein Sci       Date:  2014-11-13       Impact factor: 6.725

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