| Literature DB >> 23867062 |
Hamada Mohamed Ibrahim1, Haider Behbehani, Mohamed H Elnagdi.
Abstract
BACKGROUND: Despite significant progresses in antimicrobial therapy,Entities:
Year: 2013 PMID: 23867062 PMCID: PMC3751453 DOI: 10.1186/1752-153X-7-123
Source DB: PubMed Journal: Chem Cent J ISSN: 1752-153X Impact factor: 4.215
Scheme 1Synthesis of 2-amino-5-arylazonicotinic acid 8 and pyridazinone derivatives 10.
Figure 1ORTEP plot of the X-ray crystallographic data determined for 2a and 2h.
Figure 2ORTEP plot of the X-ray crystallographic data determined for 8a.
Figure 3ORTEP plot of the X-ray crystallographic data determined for 8b.
Figure 4ORTEP plot of the X-ray crystallographic data determined for 8c.
Figure 5ORTEP plot of the X-ray crystallographic data determined for 8h.
Selected bond lengths and bond angles for 8a
| N3-C8 | 1.332 | C8-N3-C9 | 119.4 |
| N3-C9 | 1.363 | N3-C8-C7 | 122.5 |
| N4-C9 | 1.327 | N3-C8-C12 | 114.5 |
| C9-C10 | 1.421 | N3-C9-N4 | 116.3 |
| N1-C1 | 1.427 | N4-C9-C10 | 122.5 |
| N1-N2 | 1.259 | N1-N2-C7 | 116.0 |
| N2-C7 | 1.406 | N2-C7-C8 | 116.1 |
Selected bond lengths and bond angles for 8h
| N4-C8 | 1.344 | C8-N4-C9 | 119.6 |
| N4-C9 | 1.352 | N4-C9-C10 | 120.8 |
| N6-C9 | 1.342 | N4-C8-C7 | 121.3 |
| C9-C10 | 1.422 | N4-C9-N6 | 116.9 |
| C10-C18 | 1.433 | N6-C9-C10 | 122.3 |
| N5-C18 | 1.148 | C9-C10-C18 | 119.6 |
| N2-N3 | 1.254 | N5-C18-C10 | 179.2 |
| N3-C7 | 1.412 | N2-N3-C7 | 115.2 |
Figure 6ORTEP plot of the X-ray crystallographic data determined for 10a.
Selected bond lengths and bond angles for 10a
| N1-N2 | 1.346 | N1-N2-C13 | 126.04 |
| N1-C6 | 1.312 | N1-N2-C7 | 114.44 |
| N2-C13 | 1.413 | C13-N2-C7 | 119.32 |
| O2-C13 | 1.217 | N2-C13-C14 | 112.98 |
| O1-C5 | 1.220 | C6-N1-N2 | 117.37 |
| N2-C7 | 1.442 | O3-C16-C14 | 116.3 |
Scheme 2Synthesis of acylated azonicotinate derivatives 11 and 12.
Figure 7ORTEP plot of the X-ray crystallographic data determined for 11a.
Figure 8ORTEP plot of the X-ray crystallographic data determined for 12.
Scheme 3Synthesis of pyrido[2,3-]pyrimidine derivatives 15 and 16.
Inhibition zone diameter (mm) of the tested chemicals that showed antimicrobial activities against the tested microorganisms
| 20 (0.04) | 0 | 23 (0.02) | 12 (0.02) | 34 (0.05) | |
| 0 | 0 | 12 (0.04) | 14 (0.10) | 0 | |
| 0 | 0 | 12 (0.02) | 10 (0.03) | 0 | |
| 0 | 0 | 12 (0.03) | 10 (0.07) | 0 | |
| 0 | 0 | 11 (0.07) | 8 (0.07) | 0 | |
| 0 | 0 | 16 (0.04) | 11 (0.05) | 0 | |
| 0 | 0 | 30 (0.07) | 0 | 0 | |
| 0 | 0 | 28 (0.10) | 0 | 0 | |
| 0 | 0 | 23 (0.02) | 0 | 0 | |
| 0 | 0 | 25 (0.09) | 0 | 0 | |
| 0 | 0 | 29 (0.03) | 0 | 0 | |
| 0 | 0 | 27 (0.10) | 0 | 0 | |
| 0 | 0 | 26 (0.10) | 0 | 0 | |
| 0 | 0 | 22 (0.20) | 0 | 0 | |
| 0 | 0 | 25 (0.02) | 0 | 0 | |
| 0 | 0 | 29 (0.20) | 0 | 0 | |
| 0 | 0 | 13 (0.06) | 6 (0.06) | | |
| 0 | 0 | 11(0.10) | 4 (0.04) | | |
| 0 | 0 | 16 (0.05) | 0 | 0 | |
| 0 | 0 | 17 (0.10) | 0 | 0 | |
| 0 | 0 | 19 (0.02) | 12 (0.07) | 0 | |
| 0 | 0 | 23 (0.03) | 9 (0.2) | 0 | |
| 0 | 0 | 25 (0.09) | 14 (0.02) | 0 | |
| 0 | 0 | 0 | 0 | 0 | |
| a | 23 (0.14) | 17 (0.07) | 21 (0.05) | 26 (0.07) | 0 |
| b | - | - | - | - | 0 |
DMSO = Dimethyl sulfoxide, a Ampicillin antibacterial drug, b cycloheximide antifungal drug, – not tested.
The MICs (μg/mL) of selected newly synthesized compounds against the tested microorganisms
| 50 | - | 50 | - | 12.5 | |
| - | - | 125 | 100 | - | |
| - | - | 100 | - | - | |
| - | - | 12.5 | - | - | |
| - | - | 25 | - | - | |
| - | - | 50 | - | - | |
| - | | 25 | - | | |
| - | - | 25 | - | - | |
| - | - | 25 | - | - | |
| - | - | 50 | - | - | |
| - | - | 25 | - | - | |
| - | - | 12.5 | - | - | |
| - | - | 100 | - | - | |
| - | - | 100 | - | - | |
| - | - | 100 | - | - | |
| - | - | 100 | - | - | |
| - | - | 50 | - | - | |
| 0 | 0 | 50 | 100 | - | |
| a | 6.25 | - | 12.5 | 12.5 | - |
| b | - | - | - | - | - |
a Ampicillin antibacterial drug, b cycloheximide antifungal drug, – not measured.
The crystallographic data for the measured compounds[36]
| Clear light orange Block, C15H10Cl2N2O2, M = 321.16, triclinic, a = 6.3570(3) Å, b = 7.2377(3) Å, c = 16.7375(7) Å, V = 720.87(5) Å3, α = 80.359(3)°, β = 82.469(3)°, γ = 72.360(3)°, space group: P −1, Z = 2, Dcalc = 1.480 g cm−3 , No. of reflection measured 2494, 2θmax = 66.60°, R1 = 0.042. | |
| Clear light yellow Block, C15H11ClN2O2, M = 286.71, triclinic, a = 6.0147(2) Å, b = 7.3767(2) Å, c = 16.5968(4) Å, V = 672.60(3) Å3, α = 80.941(2)°, β = 85.3620(10)°, γ = 67.6940(10)°, space group: P −1, Z = 2, Dcalc = 1.416 g cm−3 , No. of reflection measured 2324, 2θmax = 66.74°, R1 = 0.036. | |
| Yellow platelet crystal, C20H16Cl2N4O2, M = 415.28, triclinic, a = 7.796(1) Å, b = 11.004(2) Å, c = 12.229(2) Å, V = 987.0(3) Å3, α = 70.789(8)°, β = 89.602(7)°, γ = 85.231(7)°, space group: P-1, Z = 2, Dcalc = 1.397 g cm−3 , No. of reflection measured 3995, 2θmax = 52.7°, R1 = 0.064. | |
| Clear light orange flake, C20H16ClN5O4, M = 425.83, monoclinic, a = 27.918(4) Å, b = 6.632(8) Å, c = 24.125(3) Å,V = 4082.0(9) Å3, α = γ = 90.00°, β = 113.965(9)°, space group: C 1 2/c 1, Z = 8, Dcalc = 1.386 g cm−3 , No. of reflection measured 3434, 2θmax = 66.59°, R1 = 0.082. | |
| Orange prism crystal, C20H16Cl2N4O2, M = 415.28, orthorhombic, a = 7.5481 (6) Å, b = 21.382(2) Å, c = 27.862(2) Å, V = 4496.8(6) Å3, α = β = γ = 90.0°, space group: Pbca, Z = 8, Dcalc = 1.404 g cm−3 , No. of reflection measured 3923, 2θmax = 50.0°, R1 = 0.067. | |
| Yellow block crystal, C18H10Cl2N6O2, M = 413.23, triclinic, a = 8.918(1) Å, b = 10.696(1) Å, c = 13.217(2) Å, V =1132.2(2) Å3, α = 73.044(6)°, β = 81.609(6)°, γ = 70.078(5)°, space group: P-1, Z = 2, Dcalc = 1.441 g cm−3 , No. of reflection measured 4609, 2θmax = 52.7°, R1 = 0.047. | |
| Clear light colorless block, C20H15ClN2O4, M = 382.81, monoclinic, a = 9.8702(7) Å, b = 18.7297(14) Å, c = 19.4912(15) Å, V = 3600.1(5) Å3, α = γ = 90°, β = 92.397(4)°, space group: P 1 21/c 1, Z = 8, Dcalc = 1.412 g cm−3 , No. of reflection measured 6168, 2θmax = 66.63°, R1 = 0.049. | |
| Yellow needle crystal, C22H17Cl2N5O5, M = 502.32, orthorhombic, a = 26.252(2) Å, b = 7.3051(5) Å, c = 24.022(2) Å, V = 4606.8(6) Å3, α = β = γ = 90°, space group: Pbcn, Z = 8, Dcalc = 1.448 g cm−3 , No. of reflection measured 4017, 2θmax = 50.0°, R1 = 0.059. | |
| Yellow needle crystal, C24H19Cl2N5O6, M = 544.35, monoclinic, a = 8.027(1) Å, b = 14.586(2) Å, c = 21.531(3) Å, V = 2499.1(5) Å3, α = γ = 90°, β = 97.548(7)°, space group: P21/c, Z = 4, Dcalc = 1.447 g cm−3 , No. of reflection measured 5078, 2θmax = 52.7°, R1 = 0.046. |