Literature DB >> 23818643

Evaluation of mixed-source, low-template DNA profiles in forensic science.

David J Balding1.   

Abstract

Enhancements in sensitivity now allow DNA profiles to be obtained from only tens of picograms of DNA, corresponding to a few cells, even for samples subject to degradation from environmental exposure. However, low-template DNA (LTDNA) profiles are subject to stochastic effects, such as "dropout" and "dropin" of alleles, and highly variable stutter peak heights. Although the sensitivity of the newly developed methods is highly appealing to crime investigators, courts are concerned about the reliability of the underlying science. High-profile cases relying on LTDNA evidence have collapsed amid controversy, including the case of Hoey in the United Kingdom and the case of Knox and Sollecito in Italy. I argue that rather than the reliability of the science, courts and commentators should focus on the validity of the statistical methods of evaluation of the evidence. Even noisy DNA evidence can be more powerful than many traditional types of evidence, and it can be helpful to a court as long as its strength is not overstated. There have been serious shortcomings in statistical methods for the evaluation of LTDNA profile evidence, however. Here, I propose a method that allows for multiple replicates with different rates of dropout, sporadic dropins, different amounts of DNA from different contributors, relatedness of suspected and alternate contributors, "uncertain" allele designations, and degradation. R code implementing the method is open source, facilitating wide scrutiny. I illustrate its good performance using real cases and simulated crime scene profiles.

Keywords:  forensic genetics; forensic identification; statistical genetics; weight of evidence

Mesh:

Substances:

Year:  2013        PMID: 23818643      PMCID: PMC3725068          DOI: 10.1073/pnas.1219739110

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  16 in total

1.  Probabilistic expert systems for handling artifacts in complex DNA mixtures.

Authors:  R G Cowell; S L Lauritzen; J Mortera
Journal:  Forensic Sci Int Genet       Date:  2010-05-07       Impact factor: 4.882

2.  DNA commission of the International Society of Forensic Genetics: Recommendations on the interpretation of mixtures.

Authors:  P Gill; C H Brenner; J S Buckleton; A Carracedo; M Krawczak; W R Mayr; N Morling; M Prinz; P M Schneider; B S Weir
Journal:  Forensic Sci Int       Date:  2006-06-05       Impact factor: 2.395

3.  LoComatioN: a software tool for the analysis of low copy number DNA profiles.

Authors:  Peter Gill; Amanda Kirkham; James Curran
Journal:  Forensic Sci Int       Date:  2006-06-08       Impact factor: 2.395

4.  Estimating the probability of allelic drop-out of STR alleles in forensic genetics.

Authors:  Torben Tvedebrink; Poul Svante Eriksen; Helle Smidt Mogensen; Niels Morling
Journal:  Forensic Sci Int Genet       Date:  2009-03-13       Impact factor: 4.882

5.  Allelic drop-out probabilities estimated by logistic regression--further considerations and practical implementation.

Authors:  Torben Tvedebrink; Poul Svante Eriksen; Maria Asplund; Helle Smidt Mogensen; Niels Morling
Journal:  Forensic Sci Int Genet       Date:  2011-07-05       Impact factor: 4.882

6.  Statistical model for degraded DNA samples and adjusted probabilities for allelic drop-out.

Authors:  Torben Tvedebrink; Poul Svante Eriksen; Helle Smidt Mogensen; Niels Morling
Journal:  Forensic Sci Int Genet       Date:  2011-04-01       Impact factor: 4.882

7.  Validation of a DNA mixture statistics tool incorporating allelic drop-out and drop-in.

Authors:  Adele A Mitchell; Jeannie Tamariz; Kathleen O'Connell; Nubia Ducasse; Zoran Budimlija; Mechthild Prinz; Theresa Caragine
Journal:  Forensic Sci Int Genet       Date:  2012-09-20       Impact factor: 4.882

8.  Validating TrueAllele® DNA mixture interpretation.

Authors:  Mark W Perlin; Matthew M Legler; Cara E Spencer; Jessica L Smith; William P Allan; Jamie L Belrose; Barry W Duceman
Journal:  J Forensic Sci       Date:  2011-08-09       Impact factor: 1.832

9.  DNA commission of the International Society of Forensic Genetics: Recommendations on the evaluation of STR typing results that may include drop-out and/or drop-in using probabilistic methods.

Authors:  P Gill; L Gusmão; H Haned; W R Mayr; N Morling; W Parson; L Prieto; M Prinz; H Schneider; P M Schneider; B S Weir
Journal:  Forensic Sci Int Genet       Date:  2012-08-03       Impact factor: 4.882

10.  Calculating the weight of evidence in low-template forensic DNA casework.

Authors:  Kirk E Lohmueller; Norah Rudin
Journal:  J Forensic Sci       Date:  2012-10-19       Impact factor: 1.832

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  12 in total

Review 1.  The future of forensic DNA analysis.

Authors:  John M Butler
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2015-08-05       Impact factor: 6.237

2.  The importance of forensic storage support: DNA quality from 11-year-old saliva on FTA cards.

Authors:  Beatrice Corradini; Milena Alù; Elena Magnanini; Mathilde Emmanuelle Galinier; Enrico Silingardi
Journal:  Int J Legal Med       Date:  2019-08-28       Impact factor: 2.686

Review 3.  Separation/extraction, detection, and interpretation of DNA mixtures in forensic science (review).

Authors:  Ruiyang Tao; Shouyu Wang; Jiashuo Zhang; Jingyi Zhang; Zihao Yang; Xiang Sheng; Yiping Hou; Suhua Zhang; Chengtao Li
Journal:  Int J Legal Med       Date:  2018-05-25       Impact factor: 2.686

4.  Models and implementation for relationship problems with dropout.

Authors:  Guro Dørum; Daniel Kling; Carlos Baeza-Richer; Manuel García-Magariños; Solve Sæbø; Stijn Desmyter; Thore Egeland
Journal:  Int J Legal Med       Date:  2014-08-10       Impact factor: 2.686

Review 5.  Genetic Diversity and Societally Important Disparities.

Authors:  Noah A Rosenberg; Jonathan T L Kang
Journal:  Genetics       Date:  2015-09       Impact factor: 4.562

Review 6.  Interpol review of forensic biology and forensic DNA typing 2016-2019.

Authors:  John M Butler; Sheila Willis
Journal:  Forensic Sci Int       Date:  2020-02-20       Impact factor: 2.395

7.  Lab Retriever: a software tool for calculating likelihood ratios incorporating a probability of drop-out for forensic DNA profiles.

Authors:  Keith Inman; Norah Rudin; Ken Cheng; Chris Robinson; Adam Kirschner; Luke Inman-Semerau; Kirk E Lohmueller
Journal:  BMC Bioinformatics       Date:  2015-09-18       Impact factor: 3.169

8.  DNA fingerprinting in forensics: past, present, future.

Authors:  Lutz Roewer
Journal:  Investig Genet       Date:  2013-11-18

9.  Verifying likelihoods for low template DNA profiles using multiple replicates.

Authors:  Christopher D Steele; Matthew Greenhalgh; David J Balding
Journal:  Forensic Sci Int Genet       Date:  2014-07-10       Impact factor: 4.882

10.  Interpretation of DNA data within the context of UK forensic science - evaluation.

Authors:  Roberto Puch-Solis; Susan Pope
Journal:  Emerg Top Life Sci       Date:  2021-09-24
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