Literature DB >> 23771299

Biomechanical model as a registration tool for image-guided neurosurgery: evaluation against BSpline registration.

Ahmed Mostayed1, Revanth Reddy Garlapati, Grand Roman Joldes, Adam Wittek, Aditi Roy, Ron Kikinis, Simon K Warfield, Karol Miller.   

Abstract

In this paper we evaluate the accuracy of warping of neuro-images using brain deformation predicted by means of a patient-specific biomechanical model against registration using a BSpline-based free form deformation algorithm. Unlike the BSpline algorithm, biomechanics-based registration does not require an intra-operative MR image which is very expensive and cumbersome to acquire. Only sparse intra-operative data on the brain surface is sufficient to compute deformation for the whole brain. In this contribution the deformation fields obtained from both methods are qualitatively compared and overlaps of Canny edges extracted from the images are examined. We define an edge based Hausdorff distance metric to quantitatively evaluate the accuracy of registration for these two algorithms. The qualitative and quantitative evaluations indicate that our biomechanics-based registration algorithm, despite using much less input data, has at least as high registration accuracy as that of the BSpline algorithm.

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Year:  2013        PMID: 23771299      PMCID: PMC3939696          DOI: 10.1007/s10439-013-0838-y

Source DB:  PubMed          Journal:  Ann Biomed Eng        ISSN: 0090-6964            Impact factor:   3.934


  32 in total

1.  Nonrigid registration using free-form deformations: application to breast MR images.

Authors:  D Rueckert; L I Sonoda; C Hayes; D L Hill; M O Leach; D J Hawkes
Journal:  IEEE Trans Med Imaging       Date:  1999-08       Impact factor: 10.048

2.  Real-Time Nonlinear Finite Element Computations on GPU - Application to Neurosurgical Simulation.

Authors:  Grand Roman Joldes; Adam Wittek; Karol Miller
Journal:  Comput Methods Appl Mech Eng       Date:  2010-12-15       Impact factor: 6.756

3.  Cortical surface strain estimation using stereovision.

Authors:  Songbai Ji; Xiaoyao Fan; David W Roberts; Keith D Paulsen
Journal:  Med Image Comput Comput Assist Interv       Date:  2011

4.  Fast parametric elastic image registration.

Authors:  Jan Kybic; Michael Unser
Journal:  IEEE Trans Image Process       Date:  2003       Impact factor: 10.856

Review 5.  Management of malignant glioma: role of surgery in relation to multimodality therapy.

Authors:  P Black
Journal:  J Neurovirol       Date:  1998-04       Impact factor: 2.643

6.  Brain-skull contact boundary conditions in an inverse computational deformation model.

Authors:  Songbai Ji; David W Roberts; Alex Hartov; Keith D Paulsen
Journal:  Med Image Anal       Date:  2009-06-23       Impact factor: 8.545

7.  A computational approach to edge detection.

Authors:  J Canny
Journal:  IEEE Trans Pattern Anal Mach Intell       Date:  1986-06       Impact factor: 6.226

8.  Perk Tutor: an open-source training platform for ultrasound-guided needle insertions.

Authors:  Tamas Ungi; Derek Sargent; Eric Moult; Andras Lasso; Csaba Pinter; Robert C McGraw; Gabor Fichtinger
Journal:  IEEE Trans Biomed Eng       Date:  2012-09-17       Impact factor: 4.538

9.  N4ITK: improved N3 bias correction.

Authors:  Nicholas J Tustison; Brian B Avants; Philip A Cook; Yuanjie Zheng; Alexander Egan; Paul A Yushkevich; James C Gee
Journal:  IEEE Trans Med Imaging       Date:  2010-04-08       Impact factor: 10.048

10.  Patient-specific computational biomechanics of the brain without segmentation and meshing.

Authors:  Johnny Y Zhang; Grand Roman Joldes; Adam Wittek; Karol Miller
Journal:  Int J Numer Method Biomed Eng       Date:  2012-08-25       Impact factor: 2.747

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  16 in total

1.  Patient-specific biomechanical model as whole-body CT image registration tool.

Authors:  Mao Li; Karol Miller; Grand Roman Joldes; Barry Doyle; Revanth Reddy Garlapati; Ron Kikinis; Adam Wittek
Journal:  Med Image Anal       Date:  2015-01-30       Impact factor: 8.545

2.  Suite of meshless algorithms for accurate computation of soft tissue deformation for surgical simulation.

Authors:  Grand Joldes; George Bourantas; Benjamin Zwick; Habib Chowdhury; Adam Wittek; Sudip Agrawal; Konstantinos Mountris; Damon Hyde; Simon K Warfield; Karol Miller
Journal:  Med Image Anal       Date:  2019-06-12       Impact factor: 8.545

3.  In vivo modeling of interstitial pressure in a porcine model: approximation of poroelastic properties and effects of enhanced anatomical structure modeling.

Authors:  Saramati Narasimhan; Jared A Weis; Hernán F J González; Reid C Thompson; Michael I Miga
Journal:  J Med Imaging (Bellingham)       Date:  2018-12-06

4.  Image Updating for Brain Shift Compensation During Resection.

Authors:  Xiaoyao Fan; David W Roberts; Jonathan D Olson; Songbai Ji; Timothy J Schaewe; David A Simon; Keith D Paulsen
Journal:  Oper Neurosurg (Hagerstown)       Date:  2018-04-01       Impact factor: 2.703

5.  Efficient inverse isoparametric mapping algorithm for whole-body computed tomography registration using deformations predicted by nonlinear finite element modeling.

Authors:  Mao Li; Adam Wittek; Karol Miller
Journal:  J Biomech Eng       Date:  2014-08       Impact factor: 2.097

6.  Intraoperative fiducial-less patient registration using volumetric 3D ultrasound: a prospective series of 32 neurosurgical cases.

Authors:  Xiaoyao Fan; David W Roberts; Songbai Ji; Alex Hartov; Keith D Paulsen
Journal:  J Neurosurg       Date:  2015-07-03       Impact factor: 5.115

Review 7.  Biomechanical modeling and computer simulation of the brain during neurosurgery.

Authors:  Karol Miller; Grand R Joldes; George Bourantas; Simon K Warfield; Damon E Hyde; Ron Kikinis; Adam Wittek
Journal:  Int J Numer Method Biomed Eng       Date:  2019-09-05       Impact factor: 2.747

8.  Towards measuring neuroimage misalignment.

Authors:  Revanth Reddy Garlapati; Ahmed Mostayed; Grand Roman Joldes; Adam Wittek; Barry Doyle; Karol Miller
Journal:  Comput Biol Med       Date:  2015-06-14       Impact factor: 4.589

9.  Biomechanical model for computing deformations for whole-body image registration: A meshless approach.

Authors:  Mao Li; Karol Miller; Grand Roman Joldes; Ron Kikinis; Adam Wittek
Journal:  Int J Numer Method Biomed Eng       Date:  2016-03-14       Impact factor: 2.747

10.  Stereovision to MR image registration for cortical surface displacement mapping to enhance image-guided neurosurgery.

Authors:  Xiaoyao Fan; Songbai Ji; Alex Hartov; David W Roberts; Keith D Paulsen
Journal:  Med Phys       Date:  2014-10       Impact factor: 4.071

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