Literature DB >> 31229760

Suite of meshless algorithms for accurate computation of soft tissue deformation for surgical simulation.

Grand Joldes1, George Bourantas1, Benjamin Zwick1, Habib Chowdhury1, Adam Wittek1, Sudip Agrawal1, Konstantinos Mountris2, Damon Hyde3, Simon K Warfield3, Karol Miller4.   

Abstract

The ability to predict patient-specific soft tissue deformations is key for computer-integrated surgery systems and the core enabling technology for a new era of personalized medicine. Element-Free Galerkin (EFG) methods are better suited for solving soft tissue deformation problems than the finite element method (FEM) due to their capability of handling large deformation while also eliminating the necessity of creating a complex predefined mesh. Nevertheless, meshless methods based on EFG formulation, exhibit three major limitations: (i) meshless shape functions using higher order basis cannot always be computed for arbitrarily distributed nodes (irregular node placement is crucial for facilitating automated discretization of complex geometries); (ii) imposition of the Essential Boundary Conditions (EBC) is not straightforward; and, (iii) numerical (Gauss) integration in space is not exact as meshless shape functions are not polynomial. This paper presents a suite of Meshless Total Lagrangian Explicit Dynamics (MTLED) algorithms incorporating a Modified Moving Least Squares (MMLS) method for interpolating scattered data both for visualization and for numerical computations of soft tissue deformation, a novel way of imposing EBC for explicit time integration, and an adaptive numerical integration procedure within the Meshless Total Lagrangian Explicit Dynamics algorithm. The appropriateness and effectiveness of the proposed methods is demonstrated using comparisons with the established non-linear procedures from commercial finite element software ABAQUS and experiments with very large deformations. To demonstrate the translational benefits of MTLED we also present a realistic brain-shift computation.
Copyright © 2019 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Meshless Total Lagrangian Explicit Dynamics; Nonlinear computational mechanics; Soft tissues; Surgical simulation

Year:  2019        PMID: 31229760      PMCID: PMC6661214          DOI: 10.1016/j.media.2019.06.004

Source DB:  PubMed          Journal:  Med Image Anal        ISSN: 1361-8415            Impact factor:   8.545


  25 in total

1.  Patient-specific non-linear finite element modelling for predicting soft organ deformation in real-time: application to non-rigid neuroimage registration.

Authors:  Adam Wittek; Grand Joldes; Mathieu Couton; Simon K Warfield; Karol Miller
Journal:  Prog Biophys Mol Biol       Date:  2010-09-22       Impact factor: 3.667

2.  3D Slicer as an image computing platform for the Quantitative Imaging Network.

Authors:  Andriy Fedorov; Reinhard Beichel; Jayashree Kalpathy-Cramer; Julien Finet; Jean-Christophe Fillion-Robin; Sonia Pujol; Christian Bauer; Dominique Jennings; Fiona Fennessy; Milan Sonka; John Buatti; Stephen Aylward; James V Miller; Steve Pieper; Ron Kikinis
Journal:  Magn Reson Imaging       Date:  2012-07-06       Impact factor: 2.546

3.  Patient-specific biomechanical model as whole-body CT image registration tool.

Authors:  Mao Li; Karol Miller; Grand Roman Joldes; Barry Doyle; Revanth Reddy Garlapati; Ron Kikinis; Adam Wittek
Journal:  Med Image Anal       Date:  2015-01-30       Impact factor: 8.545

4.  GPGPU-based explicit finite element computations for applications in biomechanics: the performance of material models, element technologies, and hardware generations.

Authors:  V Strbac; D M Pierce; J Vander Sloten; N Famaey
Journal:  Comput Methods Biomech Biomed Engin       Date:  2017-12       Impact factor: 1.763

Review 5.  From Finite Element Meshes to Clouds of Points: A Review of Methods for Generation of Computational Biomechanics Models for Patient-Specific Applications.

Authors:  Adam Wittek; Nicole M Grosland; Grand Roman Joldes; Vincent Magnotta; Karol Miller
Journal:  Ann Biomed Eng       Date:  2015-09-30       Impact factor: 3.934

Review 6.  Finite Element Methods in Human Head Impact Simulations: A Review.

Authors:  Amit Madhukar; Martin Ostoja-Starzewski
Journal:  Ann Biomed Eng       Date:  2019-01-28       Impact factor: 3.934

7.  Particle-based computational modelling of arterial disease.

Authors:  H Ahmadzadeh; M K Rausch; J D Humphrey
Journal:  J R Soc Interface       Date:  2018-12-21       Impact factor: 4.118

8.  Mechanical properties of brain tissue in tension.

Authors:  Karol Miller; Kiyoyuki Chinzei
Journal:  J Biomech       Date:  2002-04       Impact factor: 2.712

9.  Suite of finite element algorithms for accurate computation of soft tissue deformation for surgical simulation.

Authors:  Grand Roman Joldes; Adam Wittek; Karol Miller
Journal:  Med Image Anal       Date:  2008-12-24       Impact factor: 8.545

10.  A Greater Role for Surgical Treatment of Epilepsy: Why and When?

Authors:  Jerome Engel
Journal:  Epilepsy Curr       Date:  2003-03       Impact factor: 7.872

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  3 in total

1.  Computer simulation of tumour resection-induced brain deformation by a meshless approach.

Authors:  Yue Yu; George Bourantas; Benjamin Zwick; Grand Joldes; Tina Kapur; Sarah Frisken; Ron Kikinis; Arya Nabavi; Alexandra Golby; Adam Wittek; Karol Miller
Journal:  Int J Numer Method Biomed Eng       Date:  2021-10-24       Impact factor: 2.747

2.  Automatic framework for patient-specific modelling of tumour resection-induced brain shift.

Authors:  Yue Yu; Saima Safdar; George Bourantas; Benjamin Zwick; Grand Joldes; Tina Kapur; Sarah Frisken; Ron Kikinis; Arya Nabavi; Alexandra Golby; Adam Wittek; Karol Miller
Journal:  Comput Biol Med       Date:  2022-01-30       Impact factor: 6.698

3.  Mathematical modeling and computer simulation of needle insertion into soft tissue.

Authors:  Adam Wittek; George Bourantas; Benjamin F Zwick; Grand Joldes; Lionel Esteban; Karol Miller
Journal:  PLoS One       Date:  2020-12-22       Impact factor: 3.240

  3 in total

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