Literature DB >> 23556929

Generation of a suite of 3D computer-generated breast phantoms from a limited set of human subject data.

Christina M L Hsu1, Mark L Palmeri, W Paul Segars, Alexander I Veress, James T Dobbins.   

Abstract

PURPOSE: The authors previously reported on a three-dimensional computer-generated breast phantom, based on empirical human image data, including a realistic finite-element based compression model that was capable of simulating multimodality imaging data. The computerized breast phantoms are a hybrid of two phantom generation techniques, combining empirical breast CT (bCT) data with flexible computer graphics techniques. However, to date, these phantoms have been based on single human subjects. In this paper, the authors report on a new method to generate multiple phantoms, simulating additional subjects from the limited set of original dedicated breast CT data. The authors developed an image morphing technique to construct new phantoms by gradually transitioning between two human subject datasets, with the potential to generate hundreds of additional pseudoindependent phantoms from the limited bCT cases. The authors conducted a preliminary subjective assessment with a limited number of observers (n = 4) to illustrate how realistic the simulated images generated with the pseudoindependent phantoms appeared.
METHODS: Several mesh-based geometric transformations were developed to generate distorted breast datasets from the original human subject data. Segmented bCT data from two different human subjects were used as the "base" and "target" for morphing. Several combinations of transformations were applied to morph between the "base' and "target" datasets such as changing the breast shape, rotating the glandular data, and changing the distribution of the glandular tissue. Following the morphing, regions of skin and fat were assigned to the morphed dataset in order to appropriately assign mechanical properties during the compression simulation. The resulting morphed breast was compressed using a finite element algorithm and simulated mammograms were generated using techniques described previously. Sixty-two simulated mammograms, generated from morphing three human subject datasets, were used in a preliminary observer evaluation where four board certified breast radiologists with varying amounts of experience ranked the level of realism (from 1 = "fake" to 10 = "real") of the simulated images.
RESULTS: The morphing technique was able to successfully generate new and unique morphed datasets from the original human subject data. The radiologists evaluated the realism of simulated mammograms generated from the morphed and unmorphed human subject datasets and scored the realism with an average ranking of 5.87 ± 1.99, confirming that overall the phantom image datasets appeared more "real" than "fake." Moreover, there was not a significant difference (p > 0.1) between the realism of the unmorphed datasets (6.0 ± 1.95) compared to the morphed datasets (5.86 ± 1.99). Three of the four observers had overall average rankings of 6.89 ± 0.89, 6.9 ± 1.24, 6.76 ± 1.22, whereas the fourth observer ranked them noticeably lower at 2.94 ± 0.7.
CONCLUSIONS: This work presents a technique that can be used to generate a suite of realistic computerized breast phantoms from a limited number of human subjects. This suite of flexible breast phantoms can be used for multimodality imaging research to provide a known truth while concurrently producing realistic simulated imaging data.

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Year:  2013        PMID: 23556929      PMCID: PMC3625240          DOI: 10.1118/1.4794924

Source DB:  PubMed          Journal:  Med Phys        ISSN: 0094-2405            Impact factor:   4.071


  45 in total

Review 1.  A survey of medical image registration.

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2.  Nonrigid registration using free-form deformations: application to breast MR images.

Authors:  D Rueckert; L I Sonoda; C Hayes; D L Hill; M O Leach; D J Hawkes
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3.  A high-resolution voxel phantom of the breast for dose calculations in mammography.

Authors:  Christoph Hoeschen; Ute Fill; Maria Zankl; Werner Panzer; Dieter Regulla; Wilfried Döhring
Journal:  Radiat Prot Dosimetry       Date:  2005       Impact factor: 0.972

4.  Methodology for generating a 3D computerized breast phantom from empirical data.

Authors:  Christina M Li; W Paul Segars; Georgia D Tourassi; John M Boone; James T Dobbins
Journal:  Med Phys       Date:  2009-07       Impact factor: 4.071

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Review 7.  Dedicated breast computed tomography: the optimal cross-sectional imaging solution?

Authors:  Karen K Lindfors; John M Boone; Mary S Newell; Carl J D'Orsi
Journal:  Radiol Clin North Am       Date:  2010-09       Impact factor: 2.303

8.  An anthropomorphic breast model for breast imaging simulation and optimization.

Authors:  Baiyu Chen; Jamie Shorey; Robert S Saunders; Samuel Richard; John Thompson; Loren W Nolte; Ehsan Samei
Journal:  Acad Radiol       Date:  2011-03-11       Impact factor: 3.173

9.  Efficacy of MRI and mammography for breast-cancer screening in women with a familial or genetic predisposition.

Authors:  Mieke Kriege; Cecile T M Brekelmans; Carla Boetes; Peter E Besnard; Harmine M Zonderland; Inge Marie Obdeijn; Radu A Manoliu; Theo Kok; Hans Peterse; Madeleine M A Tilanus-Linthorst; Sara H Muller; Sybren Meijer; Jan C Oosterwijk; Louk V A M Beex; Rob A E M Tollenaar; Harry J de Koning; Emiel J T Rutgers; Jan G M Klijn
Journal:  N Engl J Med       Date:  2004-07-29       Impact factor: 91.245

10.  Realistic CT simulation using the 4D XCAT phantom.

Authors:  W P Segars; M Mahesh; T J Beck; E C Frey; B M W Tsui
Journal:  Med Phys       Date:  2008-08       Impact factor: 4.071

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  10 in total

1.  Population of 224 realistic human subject-based computational breast phantoms.

Authors:  David W Erickson; Jered R Wells; Gregory M Sturgeon; Ehsan Samei; James T Dobbins; W Paul Segars; Joseph Y Lo
Journal:  Med Phys       Date:  2016-01       Impact factor: 4.071

2.  The compressed breast during mammography and breast tomosynthesis: in vivo shape characterization and modeling.

Authors:  Alejandro Rodríguez-Ruiz; Greeshma A Agasthya; Ioannis Sechopoulos
Journal:  Phys Med Biol       Date:  2017-08-07       Impact factor: 3.609

3.  Finite-element modeling of compression and gravity on a population of breast phantoms for multimodality imaging simulation.

Authors:  Gregory M Sturgeon; Nooshin Kiarashi; Joseph Y Lo; E Samei; W P Segars
Journal:  Med Phys       Date:  2016-05       Impact factor: 4.071

4.  Impact of breast structure on lesion detection in breast tomosynthesis, a simulation study.

Authors:  Nooshin Kiarashi; Loren W Nolte; Joseph Y Lo; W Paul Segars; Sujata V Ghate; Justin B Solomon; Ehsan Samei
Journal:  J Med Imaging (Bellingham)       Date:  2016-09-13

5.  Development of 3D patient-based super-resolution digital breast phantoms using machine learning.

Authors:  Marco Caballo; Christian Fedon; Luca Brombal; Ritse Mann; Renata Longo; Ioannis Sechopoulos
Journal:  Phys Med Biol       Date:  2018-11-12       Impact factor: 3.609

6.  Improvements of an objective model of compressed breasts undergoing mammography: Generation and characterization of breast shapes.

Authors:  Alejandro Rodríguez-Ruiz; Steve Si Jia Feng; Jan van Zelst; Suzan Vreemann; Jessica Rice Mann; Carl Joseph D'Orsi; Ioannis Sechopoulos
Journal:  Med Phys       Date:  2017-04-25       Impact factor: 4.071

7.  Building a virtual simulation platform for quasistatic breast ultrasound elastography using open source software: A preliminary investigation.

Authors:  Yu Wang; Emily Helminen; Jingfeng Jiang
Journal:  Med Phys       Date:  2015-09       Impact factor: 4.071

8.  Development and application of a suite of 4-D virtual breast phantoms for optimization and evaluation of breast imaging systems.

Authors:  Nooshin Kiarashi; Joseph Y Lo; Yuan Lin; Lynda C Ikejimba; Sujata V Ghate; Loren W Nolte; James T Dobbins; William P Segars; Ehsan Samei
Journal:  IEEE Trans Med Imaging       Date:  2014-03-20       Impact factor: 10.048

9.  Ultra-Fast Image Reconstruction of Tomosynthesis Mammography Using GPU.

Authors:  D Arefan; A Talebpour; N Ahmadinejhad; A Kamali Asl
Journal:  J Biomed Phys Eng       Date:  2015-06-01

Review 10.  Virtual clinical trials in medical imaging: a review.

Authors:  Ehsan Abadi; William P Segars; Benjamin M W Tsui; Paul E Kinahan; Nick Bottenus; Alejandro F Frangi; Andrew Maidment; Joseph Lo; Ehsan Samei
Journal:  J Med Imaging (Bellingham)       Date:  2020-04-11
  10 in total

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