Literature DB >> 23499654

Statistical mechanics of Monod-Wyman-Changeux (MWC) models.

Sarah Marzen1, Hernan G Garcia, Rob Phillips.   

Abstract

The 50th anniversary of the classic Monod-Wyman-Changeux (MWC) model provides an opportunity to survey the broader conceptual and quantitative implications of this quintessential biophysical model. With the use of statistical mechanics, the mathematical implementation of the MWC concept links problems that seem otherwise to have no ostensible biological connection including ligand-receptor binding, ligand-gated ion channels, chemotaxis, chromatin structure and gene regulation. Hence, a thorough mathematical analysis of the MWC model can illuminate the performance limits of a number of unrelated biological systems in one stroke. The goal of our review is twofold. First, we describe in detail the general physical principles that are used to derive the activity of MWC molecules as a function of their regulatory ligands. Second, we illustrate the power of ideas from information theory and dynamical systems for quantifying how well the output of MWC molecules tracks their sensory input, giving a sense of the "design" constraints faced by these receptors.
Copyright © 2013. Published by Elsevier Ltd.

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Year:  2013        PMID: 23499654      PMCID: PMC3786005          DOI: 10.1016/j.jmb.2013.03.013

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  67 in total

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Authors:  Gasper Tkacik; Curtis G Callan; William Bialek
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  35 in total

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3.  Experiments on Hemoglobin in Single Crystals and Silica Gels Distinguish among Allosteric Models.

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6.  Allosteric proteins as logarithmic sensors.

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7.  Quantitative dissection of transcription in development yields evidence for transcription-factor-driven chromatin accessibility.

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Review 8.  Musings on mechanism: quest for a quark theory of proteins?

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Review 9.  Signalling networks and dynamics of allosteric transitions in bacterial chaperonin GroEL: implications for iterative annealing of misfolded proteins.

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Review 10.  The nicotinic acetylcholine receptor: a typical 'allosteric machine'.

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