Literature DB >> 23492828

Breathing-in epigenetic change with vitamin C.

Asun Monfort1, Anton Wutz.   

Abstract

Vitamin C is an antioxidant that maintains the activity of iron and α-ketoglutarate-dependent dioxygenases. Despite these enzymes being implicated in a wide range of biological pathways, vitamin C is rarely included in common cell culture media. Recent studies show that reprogramming of pluripotent stem cells is enhanced when vitamin C is present, thereby illustrating previous limitations in reprogramming cultures. Here, we summarize understanding of dioxygenase function in reprogramming and epigenetic regulation. The available data suggest a link between dioxygenase function and stem cell differentiation, which is exposed to environmental influence and is relevant for human disease.

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Year:  2013        PMID: 23492828      PMCID: PMC3615655          DOI: 10.1038/embor.2013.29

Source DB:  PubMed          Journal:  EMBO Rep        ISSN: 1469-221X            Impact factor:   8.807


  109 in total

1.  JmjC-domain-containing proteins and histone demethylation.

Authors:  Robert J Klose; Eric M Kallin; Yi Zhang
Journal:  Nat Rev Genet       Date:  2006-09       Impact factor: 53.242

2.  H3K9 methylation is a barrier during somatic cell reprogramming into iPSCs.

Authors:  Jiekai Chen; He Liu; Jing Liu; Jing Qi; Bei Wei; Jiaqi Yang; Hanquan Liang; You Chen; Jing Chen; Yaran Wu; Lin Guo; Jieying Zhu; Xiangjie Zhao; Tianran Peng; Yixin Zhang; Shen Chen; Xuejia Li; Dongwei Li; Tao Wang; Duanqing Pei
Journal:  Nat Genet       Date:  2012-12-02       Impact factor: 38.330

3.  Demethylation of trimethylated histone H3 Lys4 in vivo by JARID1 JmjC proteins.

Authors:  David J Seward; Gabrielle Cubberley; Soojin Kim; Matt Schonewald; Lian Zhang; Brian Tripet; David L Bentley
Journal:  Nat Struct Mol Biol       Date:  2007-02-18       Impact factor: 15.369

4.  Highly efficient miRNA-mediated reprogramming of mouse and human somatic cells to pluripotency.

Authors:  Frederick Anokye-Danso; Chinmay M Trivedi; Denise Juhr; Mudit Gupta; Zheng Cui; Ying Tian; Yuzhen Zhang; Wenli Yang; Peter J Gruber; Jonathan A Epstein; Edward E Morrisey
Journal:  Cell Stem Cell       Date:  2011-04-08       Impact factor: 24.633

5.  Early-stage epigenetic modification during somatic cell reprogramming by Parp1 and Tet2.

Authors:  Claudia A Doege; Keiichi Inoue; Toru Yamashita; David B Rhee; Skylar Travis; Ryousuke Fujita; Paolo Guarnieri; Govind Bhagat; William B Vanti; Alan Shih; Ross L Levine; Sara Nik; Emily I Chen; Asa Abeliovich
Journal:  Nature       Date:  2012-08-30       Impact factor: 49.962

Review 6.  Structural studies on 2-oxoglutarate oxygenases and related double-stranded beta-helix fold proteins.

Authors:  Ian J Clifton; Michael A McDonough; Dominic Ehrismann; Nadia J Kershaw; Nicolas Granatino; Christopher J Schofield
Journal:  J Inorg Biochem       Date:  2006-03-02       Impact factor: 4.155

7.  Epigenetic regulation of adipogenesis by PHF2 histone demethylase.

Authors:  Yosuke Okuno; Fumiaki Ohtake; Katsuhide Igarashi; Jun Kanno; Takahiro Matsumoto; Ichiro Takada; Shigeaki Kato; Yuuki Imai
Journal:  Diabetes       Date:  2012-12-28       Impact factor: 9.461

8.  Regulation of the osteoblast-specific transcription factor Osterix by NO66, a Jumonji family histone demethylase.

Authors:  Krishna M Sinha; Hideyo Yasuda; Madelene M Coombes; Sharon Y R Dent; Benoit de Crombrugghe
Journal:  EMBO J       Date:  2009-11-19       Impact factor: 11.598

9.  Isocitrate dehydrogenase (IDH) mutations promote a reversible ZEB1/microRNA (miR)-200-dependent epithelial-mesenchymal transition (EMT).

Authors:  Alexandra R Grassian; Fallon Lin; Rosemary Barrett; Yue Liu; Wei Jiang; Manav Korpal; Holly Astley; Daniel Gitterman; Thomas Henley; Rob Howes; Julian Levell; Joshua M Korn; Raymond Pagliarini
Journal:  J Biol Chem       Date:  2012-10-04       Impact factor: 5.486

10.  Phylogenomic identification of five new human homologs of the DNA repair enzyme AlkB.

Authors:  Michal A Kurowski; Ashok S Bhagwat; Grzegorz Papaj; Janusz M Bujnicki
Journal:  BMC Genomics       Date:  2003-12-10       Impact factor: 3.969

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  57 in total

Review 1.  Targeting cancer vulnerabilities with high-dose vitamin C.

Authors:  Bryan Ngo; Justin M Van Riper; Lewis C Cantley; Jihye Yun
Journal:  Nat Rev Cancer       Date:  2019-05       Impact factor: 60.716

2.  Ascorbate-induced generation of 5-hydroxymethylcytosine is unaffected by varying levels of iron and 2-oxoglutarate.

Authors:  Kevin M Dickson; Christopher B Gustafson; Juan I Young; Stephan Züchner; Gaofeng Wang
Journal:  Biochem Biophys Res Commun       Date:  2013-09-08       Impact factor: 3.575

3.  Epigenetics, vitamin supplements and cellular reprogramming.

Authors:  Martin F Pera
Journal:  Nat Genet       Date:  2013-12       Impact factor: 38.330

4.  Autotaxin-mediated lipid signaling intersects with LIF and BMP signaling to promote the naive pluripotency transcription factor program.

Authors:  Cody Kime; Masayo Sakaki-Yumoto; Leeanne Goodrich; Yohei Hayashi; Salma Sami; Rik Derynck; Michio Asahi; Barbara Panning; Shinya Yamanaka; Kiichiro Tomoda
Journal:  Proc Natl Acad Sci U S A       Date:  2016-10-13       Impact factor: 11.205

Review 5.  Regulation of the Epigenome by Vitamin C.

Authors:  Juan I Young; Stephan Züchner; Gaofeng Wang
Journal:  Annu Rev Nutr       Date:  2015-05-06       Impact factor: 11.848

6.  Nascent Induced Pluripotent Stem Cells Efficiently Generate Entirely iPSC-Derived Mice while Expressing Differentiation-Associated Genes.

Authors:  Bhishma Amlani; Yiyuan Liu; Taotao Chen; Ly-Sha Ee; Peter Lopez; Adriana Heguy; Effie Apostolou; Sang Yong Kim; Matthias Stadtfeld
Journal:  Cell Rep       Date:  2018-01-28       Impact factor: 9.423

7.  Vitamin C Sensitizes Melanoma to BET Inhibitors.

Authors:  Sushmita Mustafi; Vladimir Camarena; Claude-Henry Volmar; Tyler C Huff; David W Sant; Shaun P Brothers; Zhao-Jun Liu; Claes Wahlestedt; Gaofeng Wang
Journal:  Cancer Res       Date:  2017-11-27       Impact factor: 12.701

Review 8.  The epigenetic landscape related to reactive oxygen species formation in the cardiovascular system.

Authors:  Thomas Kietzmann; Andreas Petry; Antonina Shvetsova; Joachim M Gerhold; Agnes Görlach
Journal:  Br J Pharmacol       Date:  2017-05-10       Impact factor: 8.739

9.  Mitochondrial dysfunction in the APP/PSEN1 mouse model of Alzheimer's disease and a novel protective role for ascorbate.

Authors:  Shilpy Dixit; Joshua P Fessel; Fiona E Harrison
Journal:  Free Radic Biol Med       Date:  2017-08-31       Impact factor: 7.376

Review 10.  Loss of 5-hydroxymethylcytosine in cancer: cause or consequence?

Authors:  Gabriella Ficz; John G Gribben
Journal:  Genomics       Date:  2014-08-30       Impact factor: 5.736

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