Literature DB >> 25974700

Regulation of the Epigenome by Vitamin C.

Juan I Young1, Stephan Züchner, Gaofeng Wang.   

Abstract

Emerging evidence suggests that ascorbate, the dominant form of vitamin C under physiological pH conditions, influences activity of the genome via regulating epigenomic processes. Ascorbate serves as a cofactor for Ten-eleven translocation (TET) dioxygenases that catalyze the oxidation of 5-methylcytosine (5mC) into 5-hydroxymethylcytosine (5hmC), and further to 5-formylcytosine (5fC) and to 5-carboxylcytosine (5caC), which are ultimately replaced by unmodified cytosine. The Jumonji C (JmjC)-domain-containing histone demethylases also require ascorbate as a cofactor for histone demethylation. Thus, by primarily participating in the demethylation of both DNA and histones, ascorbate appears to be a mediator of the interface between the genome and environment. Furthermore, redox status has a profound impact on the bioavailability of ascorbate in the nucleus. In order to bridge the gap between redox biology and genomics, we suggest an interdisciplinary research field that can be termed redox genomics to study dynamic redox processes in health and diseases. This review examines the evidence and potential molecular mechanism of ascorbate in the demethylation of the genome, and it highlights potential epigenetic roles of ascorbate in various diseases.

Entities:  

Keywords:  DNA demethylation; JmjC-domain-containing histone demethylase; Ten-eleven translocation dioxygenase; histone demethylation; iron- and 2-oxoglutarate-dependent dioxygenase; vitamin C

Mesh:

Substances:

Year:  2015        PMID: 25974700      PMCID: PMC4506708          DOI: 10.1146/annurev-nutr-071714-034228

Source DB:  PubMed          Journal:  Annu Rev Nutr        ISSN: 0199-9885            Impact factor:   11.848


  97 in total

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Authors:  M E Rice; I Russo-Menna
Journal:  Neuroscience       Date:  1998-02       Impact factor: 3.590

Review 2.  Interpreting the language of histone and DNA modifications.

Authors:  Scott B Rothbart; Brian D Strahl
Journal:  Biochim Biophys Acta       Date:  2014-03-12

3.  Increased facilitated transport of dehydroascorbic acid without changes in sodium-dependent ascorbate transport in human melanoma cells.

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Journal:  Cancer Res       Date:  1997-06-15       Impact factor: 12.701

4.  Ascorbate induces ten-eleven translocation (Tet) methylcytosine dioxygenase-mediated generation of 5-hydroxymethylcytosine.

Authors:  Emily A Minor; Brenda L Court; Juan I Young; Gaofeng Wang
Journal:  J Biol Chem       Date:  2013-04-02       Impact factor: 5.157

5.  Programming and inheritance of parental DNA methylomes in mammals.

Authors:  Lu Wang; Jun Zhang; Jialei Duan; Xinxing Gao; Wei Zhu; Xingyu Lu; Lu Yang; Jing Zhang; Guoqiang Li; Weimin Ci; Wei Li; Qi Zhou; Neel Aluru; Fuchou Tang; Chuan He; Xingxu Huang; Jiang Liu
Journal:  Cell       Date:  2014-05-08       Impact factor: 41.582

Review 6.  5-Hydroxymethylcytosine: generation, fate, and genomic distribution.

Authors:  Li Shen; Yi Zhang
Journal:  Curr Opin Cell Biol       Date:  2013-03-13       Impact factor: 8.382

7.  Non-transferrin iron reduction and uptake are regulated by transmembrane ascorbate cycling in K562 cells.

Authors:  Darius J R Lane; Alfons Lawen
Journal:  J Biol Chem       Date:  2008-03-17       Impact factor: 5.157

8.  Xist repression shows time-dependent effects on the reprogramming of female somatic cells to induced pluripotent stem cells.

Authors:  Qi Chen; Shuai Gao; Wenteng He; Xiaochen Kou; Yanhong Zhao; Hong Wang; Shaorong Gao
Journal:  Stem Cells       Date:  2014-10       Impact factor: 6.277

9.  10th NTES Conference: Nickel and Arsenic Compounds Alter the Epigenome of Peripheral Blood Mononuclear Cells.

Authors:  Jason Brocato; Max Costa
Journal:  J Trace Elem Med Biol       Date:  2014-04-19       Impact factor: 3.849

10.  Association between vitamin C intake and lung cancer: a dose-response meta-analysis.

Authors:  Jie Luo; Li Shen; Di Zheng
Journal:  Sci Rep       Date:  2014-08-22       Impact factor: 4.379

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  105 in total

Review 1.  Targeting cancer vulnerabilities with high-dose vitamin C.

Authors:  Bryan Ngo; Justin M Van Riper; Lewis C Cantley; Jihye Yun
Journal:  Nat Rev Cancer       Date:  2019-05       Impact factor: 60.716

2.  Restoration of 5-hydroxymethylcytosine by ascorbate blocks kidney tumour growth.

Authors:  Guangzhe Ge; Ding Peng; Ziying Xu; Bao Guan; Zijuan Xin; Qun He; Yuanyuan Zhou; Xuesong Li; Liqun Zhou; Weimin Ci
Journal:  EMBO Rep       Date:  2018-06-28       Impact factor: 8.807

3.  SVCT2 Is Expressed by Cerebellar Precursor Cells, Which Differentiate into Neurons in Response to Ascorbic Acid.

Authors:  Karina Oyarce; Carmen Silva-Alvarez; Luciano Ferrada; Fernando Martínez; Katterine Salazar; Francisco Nualart
Journal:  Mol Neurobiol       Date:  2017-01-17       Impact factor: 5.590

4.  Restoration of TET2 Function Blocks Aberrant Self-Renewal and Leukemia Progression.

Authors:  Luisa Cimmino; Igor Dolgalev; Yubao Wang; Akihide Yoshimi; Gaëlle H Martin; Jingjing Wang; Victor Ng; Bo Xia; Matthew T Witkowski; Marisa Mitchell-Flack; Isabella Grillo; Sofia Bakogianni; Delphine Ndiaye-Lobry; Miguel Torres Martín; Maria Guillamot; Robert S Banh; Mingjiang Xu; Maria E Figueroa; Ross A Dickins; Omar Abdel-Wahab; Christopher Y Park; Aristotelis Tsirigos; Benjamin G Neel; Iannis Aifantis
Journal:  Cell       Date:  2017-08-17       Impact factor: 41.582

Review 5.  Dietary Modulation of the Epigenome.

Authors:  Folami Y Ideraabdullah; Steven H Zeisel
Journal:  Physiol Rev       Date:  2018-04-01       Impact factor: 37.312

6.  Impact of polymorphisms within genes involved in regulating DNA methylation in patients with metastatic colorectal cancer enrolled in three independent, randomised, open-label clinical trials: a meta-analysis from TRIBE, MAVERICC and FIRE-3.

Authors:  Alberto Puccini; Fotios Loupakis; Sebastian Stintzing; Shu Cao; Francesca Battaglin; Ryuma Togunaka; Madiha Naseem; Martin D Berger; Shivani Soni; Wu Zhang; Christoph Mancao; Bodour Salhia; Shannon M Mumenthaler; Daniel J Weisenberger; Gangning Liang; Chiara Cremolini; Volker Heinemann; Alfredo Falcone; Joshua Millstein; Heinz-Josef Lenz
Journal:  Eur J Cancer       Date:  2019-03-07       Impact factor: 9.162

Review 7.  Preservation of renal function in chronic diabetes by enhancing glomerular glucose metabolism.

Authors:  Weier Qi; Qian Li; Daniel Gordin; George L King
Journal:  J Mol Med (Berl)       Date:  2018-03-24       Impact factor: 4.599

8.  TET family dioxygenases and the TET activator vitamin C in immune responses and cancer.

Authors:  Xiaojing Yue; Anjana Rao
Journal:  Blood       Date:  2020-09-17       Impact factor: 22.113

Review 9.  Vitamin C in Stem Cell Reprogramming and Cancer.

Authors:  Luisa Cimmino; Benjamin G Neel; Iannis Aifantis
Journal:  Trends Cell Biol       Date:  2018-04-30       Impact factor: 20.808

10.  Therapeutic Targeting of SDHB-Mutated Pheochromocytoma/Paraganglioma with Pharmacologic Ascorbic Acid.

Authors:  Yang Liu; Ying Pang; Chunzhang Yang; Karel Pacak; Boqun Zhu; Ondrej Uher; Veronika Caisova; Thanh-Truc Huynh; David Taieb; Katerina Hadrava Vanova; Hans Kumar Ghayee; Jiri Neuzil; Mark Levine
Journal:  Clin Cancer Res       Date:  2020-03-09       Impact factor: 12.531

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