Literature DB >> 23465542

Cohesin at active genes: a unifying theme for cohesin and gene expression from model organisms to humans.

Dale Dorsett1, Matthias Merkenschlager.   

Abstract

Cohesin is an evolutionarily ancient multisubunit protein complex with a deeply conserved function: it provides cohesion between sister chromatids from the time of DNA replication in S-phase until mitosis. This cohesion facilitates repair of damage that occurs during DNA replication, and, crucially, enforces faithful segregation of chromosomes upon cell division. Cohesin also influences gene expression, and relative to sister chromatid cohesion, gene expression is exquisitely sensitive to moderate changes in cohesin activity. Early studies revealed differences in cohesin's roles in gene expression between various organisms. In all organisms examined, however, cohesin marks a subset of active genes. This review focuses on the roles of cohesin at active genes, and to what extent these roles are conserved between organisms.
Copyright © 2013 Elsevier Ltd. All rights reserved.

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Year:  2013        PMID: 23465542      PMCID: PMC3691354          DOI: 10.1016/j.ceb.2013.02.003

Source DB:  PubMed          Journal:  Curr Opin Cell Biol        ISSN: 0955-0674            Impact factor:   8.382


  57 in total

1.  The Scc2/Scc4 cohesin loader determines the distribution of cohesin on budding yeast chromosomes.

Authors:  Igor Kogut; Jianbin Wang; Vincent Guacci; Rohinton K Mistry; Paul C Megee
Journal:  Genes Dev       Date:  2009-10-01       Impact factor: 11.361

2.  Cohesin mediates chromatin interactions that regulate mammalian β-globin expression.

Authors:  Richard Chien; Weihua Zeng; Shimako Kawauchi; M A Bender; Rosaysela Santos; Heather C Gregson; John A Schmiesing; Daniel A Newkirk; Xiangduo Kong; Alexander R Ball; Anne L Calof; Arthur D Lander; Mark T Groudine; Kyoko Yokomori
Journal:  J Biol Chem       Date:  2011-03-29       Impact factor: 5.157

3.  Global analysis of the insulator binding protein CTCF in chromatin barrier regions reveals demarcation of active and repressive domains.

Authors:  Suresh Cuddapah; Raja Jothi; Dustin E Schones; Tae-Young Roh; Kairong Cui; Keji Zhao
Journal:  Genome Res       Date:  2008-12-03       Impact factor: 9.043

4.  A chromatin remodelling complex that loads cohesin onto human chromosomes.

Authors:  Mohamed-Ali Hakimi; Daniel A Bochar; John A Schmiesing; Yuanshu Dong; Orr G Barak; David W Speicher; Kyoko Yokomori; Ramin Shiekhattar
Journal:  Nature       Date:  2002-08-29       Impact factor: 49.962

Review 5.  Cohesin: a catenase with separate entry and exit gates?

Authors:  Kim Nasmyth
Journal:  Nat Cell Biol       Date:  2011-10-03       Impact factor: 28.824

6.  Systematic reduction of cohesin differentially affects chromosome segregation, condensation, and DNA repair.

Authors:  Jill M Heidinger-Pauli; Ozlem Mert; Carol Davenport; Vincent Guacci; Douglas Koshland
Journal:  Curr Biol       Date:  2010-05-06       Impact factor: 10.834

7.  ATP hydrolysis is required for relocating cohesin from sites occupied by its Scc2/4 loading complex.

Authors:  Bin Hu; Takehiko Itoh; Ajay Mishra; Yuki Katoh; Kok-Lung Chan; William Upcher; Camilla Godlee; Maurici B Roig; Katsuhiko Shirahige; Kim Nasmyth
Journal:  Curr Biol       Date:  2010-12-23       Impact factor: 10.834

8.  A direct role for cohesin in gene regulation and ecdysone response in Drosophila salivary glands.

Authors:  Andrea Pauli; Joke G van Bemmel; Raquel A Oliveira; Takehiko Itoh; Katsuhiko Shirahige; Bas van Steensel; Kim Nasmyth
Journal:  Curr Biol       Date:  2010-10-07       Impact factor: 10.834

9.  Regulation of the Drosophila Enhancer of split and invected-engrailed gene complexes by sister chromatid cohesion proteins.

Authors:  Cheri A Schaaf; Ziva Misulovin; Gurmukh Sahota; Akbar M Siddiqui; Yuri B Schwartz; Tatyana G Kahn; Vincenzo Pirrotta; Maria Gause; Dale Dorsett
Journal:  PLoS One       Date:  2009-07-09       Impact factor: 3.240

10.  Genome-wide mapping of the cohesin complex in the yeast Saccharomyces cerevisiae.

Authors:  Earl F Glynn; Paul C Megee; Hong-Guo Yu; Cathy Mistrot; Elcin Unal; Douglas E Koshland; Joseph L DeRisi; Jennifer L Gerton
Journal:  PLoS Biol       Date:  2004-07-27       Impact factor: 8.029

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  72 in total

Review 1.  Polycomb and Trithorax Group Genes in Drosophila.

Authors:  Judith A Kassis; James A Kennison; John W Tamkun
Journal:  Genetics       Date:  2017-08       Impact factor: 4.562

Review 2.  The Many Roles of Cohesin in Drosophila Gene Transcription.

Authors:  Dale Dorsett
Journal:  Trends Genet       Date:  2019-05-23       Impact factor: 11.639

3.  Distinct Roles of Brd2 and Brd4 in Potentiating the Transcriptional Program for Th17 Cell Differentiation.

Authors:  Ka Lung Cheung; Fan Zhang; Anbalagan Jaganathan; Rajal Sharma; Qiang Zhang; Tsuyoshi Konuma; Tong Shen; June-Yong Lee; Chunyan Ren; Chih-Hung Chen; Geming Lu; Matthew R Olson; Weijia Zhang; Mark H Kaplan; Dan R Littman; Martin J Walsh; Huabao Xiong; Lei Zeng; Ming-Ming Zhou
Journal:  Mol Cell       Date:  2017-03-03       Impact factor: 17.970

4.  A cluster to remember.

Authors:  Gerd A Blobel; Ross C Hardison
Journal:  Cell       Date:  2013-08-15       Impact factor: 41.582

5.  Chromatin stretch enhancer states drive cell-specific gene regulation and harbor human disease risk variants.

Authors:  Stephen C J Parker; Michael L Stitzel; D Leland Taylor; Jose Miguel Orozco; Michael R Erdos; Jennifer A Akiyama; Kelly Lammerts van Bueren; Peter S Chines; Narisu Narisu; Brian L Black; Axel Visel; Len A Pennacchio; Francis S Collins
Journal:  Proc Natl Acad Sci U S A       Date:  2013-10-14       Impact factor: 11.205

Review 6.  MLL3/MLL4/COMPASS Family on Epigenetic Regulation of Enhancer Function and Cancer.

Authors:  Christie C Sze; Ali Shilatifard
Journal:  Cold Spring Harb Perspect Med       Date:  2016-11-01       Impact factor: 6.915

Review 7.  Condensins and cohesins - one of these things is not like the other!

Authors:  Robert V Skibbens
Journal:  J Cell Sci       Date:  2019-02-07       Impact factor: 5.285

Review 8.  Enhancer deregulation in cancer and other diseases.

Authors:  Hans-Martin Herz
Journal:  Bioessays       Date:  2016-08-29       Impact factor: 4.345

Review 9.  Enhancer malfunction in cancer.

Authors:  Hans-Martin Herz; Deqing Hu; Ali Shilatifard
Journal:  Mol Cell       Date:  2014-03-20       Impact factor: 17.970

Review 10.  A mechanistic link between gene regulation and genome architecture in mammalian development.

Authors:  Giancarlo Bonora; Kathrin Plath; Matthew Denholtz
Journal:  Curr Opin Genet Dev       Date:  2014-07-05       Impact factor: 5.578

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