Literature DB >> 31130395

The Many Roles of Cohesin in Drosophila Gene Transcription.

Dale Dorsett1.   

Abstract

The cohesin protein complex mediates sister chromatid cohesion to ensure accurate chromosome segregation, and also influences gene transcription in higher eukaryotes. Modest deficits in cohesin function that do not alter chromosome segregation cause significant birth defects. The mechanisms by which cohesin participates in gene regulation have been studied in Drosophila, revealing that it is involved in gene activation by transcriptional enhancers and epigenetic gene silencing mediated by Polycomb group proteins. Recent studies reveal that early DNA replication origins are important for determining which genes associate with cohesin, and suggest that cohesin at replication origins is important for establishing both sister chromatid cohesion and enhancer-promoter communication.
Copyright © 2019 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  DNA replication; Polycomb silencing; gene promoter; sister chromatid cohesion; transcriptional enhancer

Mesh:

Substances:

Year:  2019        PMID: 31130395      PMCID: PMC6571051          DOI: 10.1016/j.tig.2019.04.002

Source DB:  PubMed          Journal:  Trends Genet        ISSN: 0168-9525            Impact factor:   11.639


  70 in total

1.  A bromodomain protein, MCAP, associates with mitotic chromosomes and affects G(2)-to-M transition.

Authors:  A Dey; J Ellenberg; A Farina; A E Coleman; T Maruyama; S Sciortino; J Lippincott-Schwartz; K Ozato
Journal:  Mol Cell Biol       Date:  2000-09       Impact factor: 4.272

2.  The cohesin ring concatenates sister DNA molecules.

Authors:  Christian H Haering; Ana-Maria Farcas; Prakash Arumugam; Jean Metson; Kim Nasmyth
Journal:  Nature       Date:  2008-07-02       Impact factor: 49.962

3.  Drosophila ORC localizes to open chromatin and marks sites of cohesin complex loading.

Authors:  Heather K MacAlpine; Raluca Gordân; Sara K Powell; Alexander J Hartemink; David M MacAlpine
Journal:  Genome Res       Date:  2009-12-07       Impact factor: 9.043

4.  Nipped-B, a Drosophila homologue of chromosomal adherins, participates in activation by remote enhancers in the cut and Ultrabithorax genes.

Authors:  R A Rollins; P Morcillo; D Dorsett
Journal:  Genetics       Date:  1999-06       Impact factor: 4.562

5.  Dosage-sensitive regulation of cohesin chromosome binding and dynamics by Nipped-B, Pds5, and Wapl.

Authors:  Maria Gause; Ziva Misulovin; Amy Bilyeu; Dale Dorsett
Journal:  Mol Cell Biol       Date:  2010-08-09       Impact factor: 4.272

6.  Association of cohesin and Nipped-B with transcriptionally active regions of the Drosophila melanogaster genome.

Authors:  Ziva Misulovin; Yuri B Schwartz; Xiao-Yong Li; Tatyana G Kahn; Maria Gause; Stewart MacArthur; Justin C Fay; Michael B Eisen; Vincenzo Pirrotta; Mark D Biggin; Dale Dorsett
Journal:  Chromosoma       Date:  2007-10-27       Impact factor: 4.316

7.  The Drosophila cohesin subunit Rad21 is a trithorax group (trxG) protein.

Authors:  Graham Hallson; Monika Syrzycka; Samantha A Beck; James A Kennison; Dale Dorsett; Scott L Page; Sally M Hunter; Rebecca Keall; William D Warren; Hugh W Brock; Donald A R Sinclair; Barry M Honda
Journal:  Proc Natl Acad Sci U S A       Date:  2008-08-19       Impact factor: 11.205

8.  Regulation of the Drosophila Enhancer of split and invected-engrailed gene complexes by sister chromatid cohesion proteins.

Authors:  Cheri A Schaaf; Ziva Misulovin; Gurmukh Sahota; Akbar M Siddiqui; Yuri B Schwartz; Tatyana G Kahn; Vincenzo Pirrotta; Maria Gause; Dale Dorsett
Journal:  PLoS One       Date:  2009-07-09       Impact factor: 3.240

9.  Cohesin relocation from sites of chromosomal loading to places of convergent transcription.

Authors:  Armelle Lengronne; Yuki Katou; Saori Mori; Shihori Yokobayashi; Gavin P Kelly; Takehiko Itoh; Yoshinori Watanabe; Katsuhiko Shirahige; Frank Uhlmann
Journal:  Nature       Date:  2004-06-30       Impact factor: 49.962

10.  Genome-wide mapping of the cohesin complex in the yeast Saccharomyces cerevisiae.

Authors:  Earl F Glynn; Paul C Megee; Hong-Guo Yu; Cathy Mistrot; Elcin Unal; Douglas E Koshland; Joseph L DeRisi; Jennifer L Gerton
Journal:  PLoS Biol       Date:  2004-07-27       Impact factor: 8.029

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  8 in total

1.  Drosophila insulator proteins exhibit in vivo liquid-liquid phase separation properties.

Authors:  Bright Amankwaa; Todd Schoborg; Mariano Labrador
Journal:  Life Sci Alliance       Date:  2022-07-19

2.  The chromatin remodeling enzyme Chd4 regulates genome architecture in the mouse brain.

Authors:  Tomoko Yamada; Yue Yang; Jared V Goodman; Lingchun Kong; Dennis Y Wu; Guoyan Zhao; Harrison W Gabel; Azad Bonni
Journal:  Nat Commun       Date:  2020-07-09       Impact factor: 14.919

3.  Polycomb and Trithorax Group Proteins: The Long Road from Mutations in Drosophila to Use in Medicine.

Authors:  D A Chetverina; D V Lomaev; M M Erokhin
Journal:  Acta Naturae       Date:  2020 Oct-Dec       Impact factor: 1.845

Review 4.  Mechanisms of Enhancer-Promoter Interactions in Higher Eukaryotes.

Authors:  Olga Kyrchanova; Pavel Georgiev
Journal:  Int J Mol Sci       Date:  2021-01-12       Impact factor: 5.923

5.  The cohesin stabilizer Sororin drives G2-M transition and spindle assembly in mammalian oocytes.

Authors:  Changyin Zhou; Xue Zhang; Yilong Miao; Yu Zhang; Yu Li; Bo Xiong
Journal:  Sci Adv       Date:  2021-09-24       Impact factor: 14.136

6.  An explainable artificial intelligence approach for decoding the enhancer histone modifications code and identification of novel enhancers in Drosophila.

Authors:  Jareth C Wolfe; Liudmila A Mikheeva; Hani Hagras; Nicolae Radu Zabet
Journal:  Genome Biol       Date:  2021-11-08       Impact factor: 13.583

Review 7.  3D chromatin architecture and transcription regulation in cancer.

Authors:  Siwei Deng; Yuliang Feng; Siim Pauklin
Journal:  J Hematol Oncol       Date:  2022-05-04       Impact factor: 23.168

8.  Spatial patterns of CTCF sites define the anatomy of TADs and their boundaries.

Authors:  Luca Nanni; Stefano Ceri; Colin Logie
Journal:  Genome Biol       Date:  2020-08-12       Impact factor: 13.583

  8 in total

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