Literature DB >> 20933422

A direct role for cohesin in gene regulation and ecdysone response in Drosophila salivary glands.

Andrea Pauli1, Joke G van Bemmel, Raquel A Oliveira, Takehiko Itoh, Katsuhiko Shirahige, Bas van Steensel, Kim Nasmyth.   

Abstract

BACKGROUND: Developmental abnormalities observed in Cornelia de Lange syndrome have been genetically linked to mutations in the cohesin machinery. These and other recent experimental findings have led to the suggestion that cohesin, in addition to its canonical function of mediating sister chromatid cohesion, might also be involved in regulating gene expression.
RESULTS: We report that cleavage of cohesin's kleisin subunit in postmitotic Drosophila salivary glands induces major changes in the transcript levels of many genes. Kinetic analyses of changes in transcript levels upon cohesin cleavage reveal that a subset of genes responds to cohesin cleavage within a few hours. In addition, cohesin binds to most of these loci, suggesting that cohesin is directly regulating their expression. Among these genes are several that are regulated by the steroid hormone ecdysone. Cytological visualization of transcription at selected ecdysone-responsive genes reveals that puffing at Eip74EF ceases within an hour or two of cohesin cleavage, long before any decline in ecdysone receptor could be detected at this locus.
CONCLUSION: We conclude that cohesin regulates expression of a distinct set of genes, including those mediating the ecdysone response.
Copyright © 2010 Elsevier Ltd. All rights reserved.

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Year:  2010        PMID: 20933422      PMCID: PMC4763543          DOI: 10.1016/j.cub.2010.09.006

Source DB:  PubMed          Journal:  Curr Biol        ISSN: 0960-9822            Impact factor:   10.834


  37 in total

1.  Nipped-B, a Drosophila homologue of chromosomal adherins, participates in activation by remote enhancers in the cut and Ultrabithorax genes.

Authors:  R A Rollins; P Morcillo; D Dorsett
Journal:  Genetics       Date:  1999-06       Impact factor: 4.562

2.  X-linked Cornelia de Lange syndrome owing to SMC1L1 mutations.

Authors:  Antonio Musio; Angelo Selicorni; Maria Luisa Focarelli; Cristina Gervasini; Donatella Milani; Silvia Russo; Paolo Vezzoni; Lidia Larizza
Journal:  Nat Genet       Date:  2006-04-09       Impact factor: 38.330

3.  Continuous Cyclin E expression inhibits progression through endoreduplication cycles in Drosophila.

Authors:  A Weiss; A Herzig; H Jacobs; C F Lehner
Journal:  Curr Biol       Date:  1998-02-12       Impact factor: 10.834

4.  Spatiotemporal rescue of memory dysfunction in Drosophila.

Authors:  Sean E McGuire; Phuong T Le; Alexander J Osborn; Kunihiro Matsumoto; Ronald L Davis
Journal:  Science       Date:  2003-12-05       Impact factor: 47.728

5.  Cohesin-dependent regulation of Runx genes.

Authors:  Julia A Horsfield; Sasha H Anagnostou; Jimmy Kuang-Hsien Hu; Kitty Hsiao Yu Cho; Robert Geisler; Graham Lieschke; Kathryn E Crosier; Philip S Crosier
Journal:  Development       Date:  2007-06-13       Impact factor: 6.868

6.  The genomic response to 20-hydroxyecdysone at the onset of Drosophila metamorphosis.

Authors:  Robert B Beckstead; Geanette Lam; Carl S Thummel
Journal:  Genome Biol       Date:  2005-11-21       Impact factor: 13.583

7.  Transcriptional dysregulation in NIPBL and cohesin mutant human cells.

Authors:  Jinglan Liu; Zhe Zhang; Masashige Bando; Takehiko Itoh; Matthew A Deardorff; Dinah Clark; Maninder Kaur; Stephany Tandy; Tatsuro Kondoh; Eric Rappaport; Nancy B Spinner; Hugo Vega; Laird G Jackson; Katsuhiko Shirahige; Ian D Krantz
Journal:  PLoS Biol       Date:  2009-05-26       Impact factor: 8.029

8.  Regulation of the Drosophila Enhancer of split and invected-engrailed gene complexes by sister chromatid cohesion proteins.

Authors:  Cheri A Schaaf; Ziva Misulovin; Gurmukh Sahota; Akbar M Siddiqui; Yuri B Schwartz; Tatyana G Kahn; Vincenzo Pirrotta; Maria Gause; Dale Dorsett
Journal:  PLoS One       Date:  2009-07-09       Impact factor: 3.240

9.  Cohesin cleavage and Cdk inhibition trigger formation of daughter nuclei.

Authors:  Raquel A Oliveira; Russell S Hamilton; Andrea Pauli; Ilan Davis; Kim Nasmyth
Journal:  Nat Cell Biol       Date:  2010-01-17       Impact factor: 28.824

10.  NIPBL, encoding a homolog of fungal Scc2-type sister chromatid cohesion proteins and fly Nipped-B, is mutated in Cornelia de Lange syndrome.

Authors:  Emma T Tonkin; Tzu-Jou Wang; Steven Lisgo; Michael J Bamshad; Tom Strachan
Journal:  Nat Genet       Date:  2004-05-16       Impact factor: 38.330

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  30 in total

Review 1.  Polyteny: still a giant player in chromosome research.

Authors:  Benjamin M Stormo; Donald T Fox
Journal:  Chromosome Res       Date:  2017-08-04       Impact factor: 5.239

Review 2.  The maintenance of chromosome structure: positioning and functioning of SMC complexes.

Authors:  Kristian Jeppsson; Takaharu Kanno; Katsuhiko Shirahige; Camilla Sjögren
Journal:  Nat Rev Mol Cell Biol       Date:  2014-09       Impact factor: 94.444

Review 3.  Cohesin subunit RAD21: From biology to disease.

Authors:  Haizi Cheng; Nenggang Zhang; Debananda Pati
Journal:  Gene       Date:  2020-07-17       Impact factor: 3.688

4.  Cohesin selectively binds and regulates genes with paused RNA polymerase.

Authors:  Avery Fay; Ziva Misulovin; Jian Li; Cheri A Schaaf; Maria Gause; David S Gilmour; Dale Dorsett
Journal:  Curr Biol       Date:  2011-09-29       Impact factor: 10.834

Review 5.  Cohesin: a critical chromatin organizer in mammalian gene regulation.

Authors:  Richard Chien; Weihua Zeng; Alexander R Ball; Kyoko Yokomori
Journal:  Biochem Cell Biol       Date:  2011-08-18       Impact factor: 3.626

6.  A unique role of cohesin-SA1 in gene regulation and development.

Authors:  Silvia Remeseiro; Ana Cuadrado; Gonzalo Gómez-López; David G Pisano; Ana Losada
Journal:  EMBO J       Date:  2012-03-13       Impact factor: 11.598

7.  Cohesin embraces new phenotypes.

Authors:  Ian D Krantz
Journal:  Nat Genet       Date:  2014-11       Impact factor: 38.330

Review 8.  Cohesin: genomic insights into controlling gene transcription and development.

Authors:  Dale Dorsett
Journal:  Curr Opin Genet Dev       Date:  2011-02-14       Impact factor: 5.578

Review 9.  Ecdysone control of developmental transitions: lessons from Drosophila research.

Authors:  Naoki Yamanaka; Kim F Rewitz; Michael B O'Connor
Journal:  Annu Rev Entomol       Date:  2012-10-15       Impact factor: 19.686

10.  Proteomic profile identifies dysregulated pathways in Cornelia de Lange syndrome cells with distinct mutations in SMC1A and SMC3 genes.

Authors:  Anna Gimigliano; Linda Mannini; Laura Bianchi; Michele Puglia; Matthew A Deardorff; Stefania Menga; Ian D Krantz; Antonio Musio; Luca Bini
Journal:  J Proteome Res       Date:  2012-11-05       Impact factor: 4.466

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