Literature DB >> 23352810

Combined deficiency of Tet1 and Tet2 causes epigenetic abnormalities but is compatible with postnatal development.

Meelad M Dawlaty1, Achim Breiling, Thuc Le, Günter Raddatz, M Inmaculada Barrasa, Albert W Cheng, Qing Gao, Benjamin E Powell, Zhe Li, Mingjiang Xu, Kym F Faull, Frank Lyko, Rudolf Jaenisch.   

Abstract

Tet enzymes (Tet1/2/3) convert 5-methylcytosine (5mC) to 5-hydroxymethylcytosine (5hmC) in various embryonic and adult tissues. Mice mutant for either Tet1 or Tet2 are viable, raising the question of whether these enzymes have overlapping roles in development. Here we have generated Tet1 and Tet2 double-knockout (DKO) embryonic stem cells (ESCs) and mice. DKO ESCs remained pluripotent but were depleted of 5hmC and caused developmental defects in chimeric embryos. While a fraction of double-mutant embryos exhibited midgestation abnormalities with perinatal lethality, viable and overtly normal Tet1/Tet2-deficient mice were also obtained. DKO mice had reduced 5hmC and increased 5mC levels and abnormal methylation at various imprinted loci. Nevertheless, animals of both sexes were fertile, with females having smaller ovaries and reduced fertility. Our data show that loss of both enzymes is compatible with development but promotes hypermethylation and compromises imprinting. The data also suggest a significant contribution of Tet3 to hydroxylation of 5mC during development.
Copyright © 2013 Elsevier Inc. All rights reserved.

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Year:  2013        PMID: 23352810      PMCID: PMC3574201          DOI: 10.1016/j.devcel.2012.12.015

Source DB:  PubMed          Journal:  Dev Cell        ISSN: 1534-5807            Impact factor:   12.270


  36 in total

Review 1.  Genomic imprinting: parental influence on the genome.

Authors:  W Reik; J Walter
Journal:  Nat Rev Genet       Date:  2001-01       Impact factor: 53.242

Review 2.  DNA methylation: TET proteins-guardians of CpG islands?

Authors:  Kristine Williams; Jesper Christensen; Kristian Helin
Journal:  EMBO Rep       Date:  2011-12-23       Impact factor: 8.807

3.  Mbd3/NURD complex regulates expression of 5-hydroxymethylcytosine marked genes in embryonic stem cells.

Authors:  Ozlem Yildirim; Ruowang Li; Jui-Hung Hung; Poshen B Chen; Xianjun Dong; Ly-Sha Ee; Zhiping Weng; Oliver J Rando; Thomas G Fazzio
Journal:  Cell       Date:  2011-12-23       Impact factor: 41.582

4.  Methylation dynamics of imprinted genes in mouse germ cells.

Authors:  Diana Lucifero; Carmen Mertineit; Hugh J Clarke; Timothy H Bestor; Jacquetta M Trasler
Journal:  Genomics       Date:  2002-04       Impact factor: 5.736

5.  Germline DNA demethylation dynamics and imprint erasure through 5-hydroxymethylcytosine.

Authors:  Roopsha Sengupta; Jan J Zylicz; Kazuhiro Murakami; Jamie A Hackett; Caroline Lee; Thomas A Down; M Azim Surani
Journal:  Science       Date:  2012-12-06       Impact factor: 47.728

6.  Tet3 CXXC domain and dioxygenase activity cooperatively regulate key genes for Xenopus eye and neural development.

Authors:  Yufei Xu; Chao Xu; Akiko Kato; Wolfram Tempel; Jose Garcia Abreu; Chuanbing Bian; Yeguang Hu; Di Hu; Bin Zhao; Tanja Cerovina; Jianbo Diao; Feizhen Wu; Housheng Hansen He; Qingyan Cui; Erin Clark; Chun Ma; Andrew Barbara; Gert Jan C Veenstra; Guoliang Xu; Ursula B Kaiser; X Shirley Liu; Stephen P Sugrue; Xi He; Jinrong Min; Yoichi Kato; Yujiang Geno Shi
Journal:  Cell       Date:  2012-12-07       Impact factor: 41.582

7.  Hydroxylation of 5-methylcytosine by TET2 maintains the active state of the mammalian HOXA cluster.

Authors:  Michael T Bocker; Francesca Tuorto; Günter Raddatz; Tanja Musch; Feng-Chun Yang; Mingjiang Xu; Frank Lyko; Achim Breiling
Journal:  Nat Commun       Date:  2012-05-08       Impact factor: 14.919

8.  Tet1 controls meiosis by regulating meiotic gene expression.

Authors:  Shinpei Yamaguchi; Kwonho Hong; Rui Liu; Li Shen; Azusa Inoue; Dinh Diep; Kun Zhang; Yi Zhang
Journal:  Nature       Date:  2012-11-14       Impact factor: 49.962

9.  The dynamics of genome-wide DNA methylation reprogramming in mouse primordial germ cells.

Authors:  Stefanie Seisenberger; Simon Andrews; Felix Krueger; Julia Arand; Jörn Walter; Fátima Santos; Christian Popp; Bernard Thienpont; Wendy Dean; Wolf Reik
Journal:  Mol Cell       Date:  2012-12-06       Impact factor: 17.970

10.  TET2 promotes histone O-GlcNAcylation during gene transcription.

Authors:  Qiang Chen; Yibin Chen; Chunjing Bian; Ryoji Fujiki; Xiaochun Yu
Journal:  Nature       Date:  2012-12-09       Impact factor: 49.962

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  211 in total

1.  Short-term memory of danger signals and environmental stimuli in immune cells.

Authors:  Silvia Monticelli; Gioacchino Natoli
Journal:  Nat Immunol       Date:  2013-08       Impact factor: 25.606

2.  Simultaneous generation and germline transmission of multiple gene mutations in rat using CRISPR-Cas systems.

Authors:  Wei Li; Fei Teng; Tianda Li; Qi Zhou
Journal:  Nat Biotechnol       Date:  2013-08       Impact factor: 54.908

3.  Epigenetics, vitamin supplements and cellular reprogramming.

Authors:  Martin F Pera
Journal:  Nat Genet       Date:  2013-12       Impact factor: 38.330

4.  Dynamic Enhancer DNA Methylation as Basis for Transcriptional and Cellular Heterogeneity of ESCs.

Authors:  Yuelin Song; Patrick R van den Berg; Styliani Markoulaki; Frank Soldner; Alessandra Dall'Agnese; Jonathan E Henninger; Jesse Drotar; Nicholas Rosenau; Malkiel A Cohen; Richard A Young; Stefan Semrau; Yonatan Stelzer; Rudolf Jaenisch
Journal:  Mol Cell       Date:  2019-08-15       Impact factor: 17.970

Review 5.  The Mechanisms of Generation, Recognition, and Erasure of DNA 5-Methylcytosine and Thymine Oxidations.

Authors:  Hideharu Hashimoto; Xing Zhang; Paula M Vertino; Xiaodong Cheng
Journal:  J Biol Chem       Date:  2015-07-07       Impact factor: 5.157

Review 6.  The TET enzymes.

Authors:  Peppi Koivunen; Tuomas Laukka
Journal:  Cell Mol Life Sci       Date:  2017-11-28       Impact factor: 9.261

7.  m(6)A RNA modification controls cell fate transition in mammalian embryonic stem cells.

Authors:  Pedro J Batista; Benoit Molinie; Jinkai Wang; Kun Qu; Jiajing Zhang; Lingjie Li; Donna M Bouley; Ernesto Lujan; Bahareh Haddad; Kaveh Daneshvar; Ava C Carter; Ryan A Flynn; Chan Zhou; Kok-Seong Lim; Peter Dedon; Marius Wernig; Alan C Mullen; Yi Xing; Cosmas C Giallourakis; Howard Y Chang
Journal:  Cell Stem Cell       Date:  2014-10-16       Impact factor: 24.633

8.  The histone deacetylase SIRT6 controls embryonic stem cell fate via TET-mediated production of 5-hydroxymethylcytosine.

Authors:  Jean-Pierre Etchegaray; Lukas Chavez; Yun Huang; Kenneth N Ross; Jiho Choi; Barbara Martinez-Pastor; Ryan M Walsh; Cesar A Sommer; Matthias Lienhard; Adrianne Gladden; Sita Kugel; Dafne M Silberman; Sridhar Ramaswamy; Gustavo Mostoslavsky; Konrad Hochedlinger; Alon Goren; Anjana Rao; Raul Mostoslavsky
Journal:  Nat Cell Biol       Date:  2015-04-27       Impact factor: 28.824

Review 9.  DNA methylation and methylcytosine oxidation in cell fate decisions.

Authors:  Kian Peng Koh; Anjana Rao
Journal:  Curr Opin Cell Biol       Date:  2013-03-14       Impact factor: 8.382

Review 10.  Breathing-in epigenetic change with vitamin C.

Authors:  Asun Monfort; Anton Wutz
Journal:  EMBO Rep       Date:  2013-03-15       Impact factor: 8.807

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