Literature DB >> 23304295

Automatic annotation of radiological observations in liver CT images.

Francisco Gimenez1, Jiajing Xu, Yi Liu, Tiffany Liu, Christopher Beaulieu, Daniel Rubin, Sandy Napel.   

Abstract

We aim to predict radiological observations using computationally-derived imaging features extracted from computed tomography (CT) images. We created a dataset of 79 CT images containing liver lesions identified and annotated by a radiologist using a controlled vocabulary of 76 semantic terms. Computationally-derived features were extracted describing intensity, texture, shape, and edge sharpness. Traditional logistic regression was compared to L(1)-regularized logistic regression (LASSO) in order to predict the radiological observations using computational features. The approach was evaluated by leave one out cross-validation. Informative radiological observations such as lesion enhancement, hypervascular attenuation, and homogeneous retention were predicted well by computational features. By exploiting relationships between computational and semantic features, this approach could lead to more accurate and efficient radiology reporting.

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Mesh:

Year:  2012        PMID: 23304295      PMCID: PMC3540508     

Source DB:  PubMed          Journal:  AMIA Annu Symp Proc        ISSN: 1559-4076


  16 in total

1.  Managing biomedical image metadata for search and retrieval of similar images.

Authors:  Daniel Korenblum; Daniel Rubin; Sandy Napel; Cesar Rodriguez; Chris Beaulieu
Journal:  J Digit Imaging       Date:  2011-08       Impact factor: 4.056

2.  Automated retrieval of CT images of liver lesions on the basis of image similarity: method and preliminary results.

Authors:  Sandy A Napel; Christopher F Beaulieu; Cesar Rodriguez; Jingyu Cui; Jiajing Xu; Ankit Gupta; Daniel Korenblum; Hayit Greenspan; Yongjun Ma; Daniel L Rubin
Journal:  Radiology       Date:  2010-05-26       Impact factor: 11.105

3.  Integral invariants for shape matching.

Authors:  Siddharth Manay; Daniel Cremers; Byung-Woo Hong; Anthony J Yezzi; Stefano Soatto
Journal:  IEEE Trans Pattern Anal Mach Intell       Date:  2006-10       Impact factor: 6.226

4.  RadLex: a new method for indexing online educational materials.

Authors:  Curtis P Langlotz
Journal:  Radiographics       Date:  2006 Nov-Dec       Impact factor: 5.333

5.  The application of multiwavelet filterbanks to image processing.

Authors:  V Strela; P N Heller; G Strang; P Topiwala; C Heil
Journal:  IEEE Trans Image Process       Date:  1999       Impact factor: 10.856

6.  iPad: Semantic annotation and markup of radiological images.

Authors:  Daniel L Rubin; Cesar Rodriguez; Priyanka Shah; Chris Beaulieu
Journal:  AMIA Annu Symp Proc       Date:  2008-11-06

7.  A comprehensive descriptor of shape: method and application to content-based retrieval of similar appearing lesions in medical images.

Authors:  Jiajing Xu; Jessica Faruque; Christopher F Beaulieu; Daniel Rubin; Sandy Napel
Journal:  J Digit Imaging       Date:  2012-02       Impact factor: 4.056

8.  Regularization Paths for Generalized Linear Models via Coordinate Descent.

Authors:  Jerome Friedman; Trevor Hastie; Rob Tibshirani
Journal:  J Stat Softw       Date:  2010       Impact factor: 6.440

Review 9.  Imaging diagnosis.

Authors:  Riccardo Lencioni; Dania Cioni; Clotilde Della Pina; Laura Crocetti; Carlo Bartolozzi
Journal:  Semin Liver Dis       Date:  2005       Impact factor: 6.115

10.  Classifying mammographic lesions using computerized image analysis.

Authors:  J Kilday; F Palmieri; M D Fox
Journal:  IEEE Trans Med Imaging       Date:  1993       Impact factor: 10.048

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  5 in total

1.  Semiquantitative Computed Tomography Characteristics for Lung Adenocarcinoma and Their Association With Lung Cancer Survival.

Authors:  Hua Wang; Matthew B Schabath; Ying Liu; Anders E Berglund; Gregory C Bloom; Jongphil Kim; Olya Stringfield; Edward A Eikman; Donald L Klippenstein; John J Heine; Steven A Eschrich; Zhaoxiang Ye; Robert J Gillies
Journal:  Clin Lung Cancer       Date:  2015-05-27       Impact factor: 4.785

2.  Predicting visual semantic descriptive terms from radiological image data: preliminary results with liver lesions in CT.

Authors:  Adrien Depeursinge; Camille Kurtz; Christopher Beaulieu; Sandy Napel; Daniel Rubin
Journal:  IEEE Trans Med Imaging       Date:  2014-05-01       Impact factor: 10.048

3.  Functional Region Annotation of Liver CT Image Based on Vascular Tree.

Authors:  Yufei Chen; Xiaodong Yue; Caiming Zhong; Gang Wang
Journal:  Biomed Res Int       Date:  2016-11-07       Impact factor: 3.411

4.  Computerized Prediction of Radiological Observations Based on Quantitative Feature Analysis: Initial Experience in Liver Lesions.

Authors:  Imon Banerjee; Christopher F Beaulieu; Daniel L Rubin
Journal:  J Digit Imaging       Date:  2017-08       Impact factor: 4.056

5.  Radiographic prediction of meningioma grade by semantic and radiomic features.

Authors:  Thibaud P Coroller; Wenya Linda Bi; Elizabeth Huynh; Malak Abedalthagafi; Ayal A Aizer; Noah F Greenwald; Chintan Parmar; Vivek Narayan; Winona W Wu; Samuel Miranda de Moura; Saksham Gupta; Rameen Beroukhim; Patrick Y Wen; Ossama Al-Mefty; Ian F Dunn; Sandro Santagata; Brian M Alexander; Raymond Y Huang; Hugo J W L Aerts
Journal:  PLoS One       Date:  2017-11-16       Impact factor: 3.240

  5 in total

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