Literature DB >> 23266100

Recent trends in nanopores for biotechnology.

Daniel H Stoloff1, Meni Wanunu.   

Abstract

Nanopore technology employs a nanoscale hole in an insulating membrane to stochastically sense with high throughput individual biomolecules in solution. The generality of the nanopore detection principle and the ease of single-molecule detection suggest many potential applications of nanopores in biotechnology. Recent progress has been made with nanopore fabrication and sophistication, as well as with applications in DNA/protein mapping, biomolecular structure analysis, protein detection, and DNA sequencing. In addition, concepts for DNA sequencing devices have been suggested, and computational efforts have been made. The state of the nanopore field is maturing and given the right type of nanopore and operating conditions, nearly every application could revolutionize medicine in terms of speed, cost, and quality. In this review, we summarize progress in nanopores for biotechnological applications over the past 2-3 years.
Copyright © 2012 Elsevier Ltd. All rights reserved.

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Year:  2012        PMID: 23266100      PMCID: PMC4711366          DOI: 10.1016/j.copbio.2012.11.008

Source DB:  PubMed          Journal:  Curr Opin Biotechnol        ISSN: 0958-1669            Impact factor:   9.740


  47 in total

1.  Microfluidic capture and release of bacteria in a conical nanopore array.

Authors:  Peng Guo; Eric W Hall; Romana Schirhagl; Hitomi Mukaibo; Charles R Martin; Richard N Zare
Journal:  Lab Chip       Date:  2011-12-14       Impact factor: 6.799

2.  Wild type, mutant protein unfolding and phase transition detected by single-nanopore recording.

Authors:  Céline Merstorf; Benjamin Cressiot; Manuela Pastoriza-Gallego; Abdelghani Oukhaled; Jean-Michel Betton; Loïc Auvray; Juan Pelta
Journal:  ACS Chem Biol       Date:  2012-02-02       Impact factor: 5.100

3.  Protein transport through a narrow solid-state nanopore at high voltage: experiments and theory.

Authors:  Benjamin Cressiot; Abdelghani Oukhaled; Gilles Patriarche; Manuela Pastoriza-Gallego; Jean-Michel Betton; Loïc Auvray; Murugappan Muthukumar; Laurent Bacri; Juan Pelta
Journal:  ACS Nano       Date:  2012-06-15       Impact factor: 15.881

4.  Rapid electronic detection of probe-specific microRNAs using thin nanopore sensors.

Authors:  Meni Wanunu; Tali Dadosh; Vishva Ray; Jingmin Jin; Larry McReynolds; Marija Drndić
Journal:  Nat Nanotechnol       Date:  2010-10-24       Impact factor: 39.213

5.  Single-molecule transport across an individual biomimetic nuclear pore complex.

Authors:  Stefan W Kowalczyk; Larisa Kapinos; Timothy R Blosser; Tomás Magalhães; Pauline van Nies; Roderick Y H Lim; Cees Dekker
Journal:  Nat Nanotechnol       Date:  2011-06-19       Impact factor: 39.213

6.  Fast DNA sequencing with a graphene-based nanochannel device.

Authors:  Seung Kyu Min; Woo Youn Kim; Yeonchoo Cho; Kwang S Kim
Journal:  Nat Nanotechnol       Date:  2011-02-06       Impact factor: 39.213

7.  Fast and controllable fabrication of suspended graphene nanopore devices.

Authors:  Song Liu; Qing Zhao; Jun Xu; Kai Yan; Hailin Peng; Fuhua Yang; Liping You; Dapeng Yu
Journal:  Nanotechnology       Date:  2012-02-01       Impact factor: 3.874

8.  Crown ether-electrolyte interactions permit nanopore detection of individual DNA abasic sites in single molecules.

Authors:  Na An; Aaron M Fleming; Henry S White; Cynthia J Burrows
Journal:  Proc Natl Acad Sci U S A       Date:  2012-06-18       Impact factor: 11.205

9.  Artificial nanopores that mimic the transport selectivity of the nuclear pore complex.

Authors:  Tijana Jovanovic-Talisman; Jaclyn Tetenbaum-Novatt; Anna Sophia McKenney; Anton Zilman; Reiner Peters; Michael P Rout; Brian T Chait
Journal:  Nature       Date:  2008-12-21       Impact factor: 49.962

10.  Local electrical potential detection of DNA by nanowire-nanopore sensors.

Authors:  Ping Xie; Qihua Xiong; Ying Fang; Quan Qing; Charles M Lieber
Journal:  Nat Nanotechnol       Date:  2011-12-11       Impact factor: 39.213

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  24 in total

Review 1.  Building membrane nanopores.

Authors:  Stefan Howorka
Journal:  Nat Nanotechnol       Date:  2017-07-06       Impact factor: 39.213

2.  Detection of benzo[a]pyrene-guanine adducts in single-stranded DNA using the α-hemolysin nanopore.

Authors:  Rukshan T Perera; Aaron M Fleming; Robert P Johnson; Cynthia J Burrows; Henry S White
Journal:  Nanotechnology       Date:  2015-01-28       Impact factor: 3.874

3.  Effects of Nanopore Charge Decorations on the Translocation Dynamics of DNA.

Authors:  Ining Jou; Murugappan Muthukumar
Journal:  Biophys J       Date:  2017-10-17       Impact factor: 4.033

4.  Dynamic Interactions between Lipid-Tethered DNA and Phospholipid Membranes.

Authors:  Patrick M Arnott; Himanshu Joshi; Aleksei Aksimentiev; Stefan Howorka
Journal:  Langmuir       Date:  2018-10-10       Impact factor: 3.882

5.  Real-time label-free measurement of HIV-1 protease activity by nanopore analysis.

Authors:  Liang Wang; Yujing Han; Shuo Zhou; Xiyun Guan
Journal:  Biosens Bioelectron       Date:  2014-06-25       Impact factor: 10.618

6.  Nucleic acid memory.

Authors:  Victor Zhirnov; Reza M Zadegan; Gurtej S Sandhu; George M Church; William L Hughes
Journal:  Nat Mater       Date:  2016-04       Impact factor: 43.841

7.  Optofluidic devices with integrated solid-state nanopores.

Authors:  Shuo Liu; Aaron R Hawkins; Holger Schmidt
Journal:  Mikrochim Acta       Date:  2016-01-27       Impact factor: 5.833

8.  Single-molecule investigation of G-quadruplex folds of the human telomere sequence in a protein nanocavity.

Authors:  Na An; Aaron M Fleming; Eric G Middleton; Cynthia J Burrows
Journal:  Proc Natl Acad Sci U S A       Date:  2014-09-15       Impact factor: 11.205

9.  Characterisation of optically driven microstructures for manipulating single DNA molecules under a fluorescence microscope.

Authors:  Kyohei Terao; Chihiro Masuda; Ryo Inukai; Murat Gel; Hidehiro Oana; Masao Washizu; Takaaki Suzuki; Hidekuni Takao; Fusao Shimokawa; Fumikazu Oohira
Journal:  IET Nanobiotechnol       Date:  2016-06       Impact factor: 1.847

10.  Bacterial and viral identification and differentiation by amplicon sequencing on the MinION nanopore sequencer.

Authors:  Andy Kilianski; Jamie L Haas; Elizabeth J Corriveau; Alvin T Liem; Kristen L Willis; Dana R Kadavy; C Nicole Rosenzweig; Samuel S Minot
Journal:  Gigascience       Date:  2015-03-26       Impact factor: 6.524

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