Literature DB >> 23136119

Observation of the Fe-CN and Fe-CO vibrations in the active site of [NiFe] hydrogenase by nuclear resonance vibrational spectroscopy.

Saeed Kamali1, Hongxin Wang, Devrani Mitra, Hideaki Ogata, Wolfgang Lubitz, Brian C Manor, Thomas B Rauchfuss, Deborah Byrne, Violaine Bonnefoy, Francis E Jenney, Michael W W Adams, Yoshitaka Yoda, Ercan Alp, Jiyong Zhao, Stephen P Cramer.   

Abstract

Nuclear inelastic scattering of (57)Fe labeled [NiFe] hydrogenase is shown to give information on different states of the enzyme. It was thus possible to detect and assign Fe-CO and Fe-CN bending and stretching vibrations of the active site outside the spectral range of the Fe-S cluster normal modes.
Copyright © 2013 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

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Year:  2012        PMID: 23136119      PMCID: PMC3535562          DOI: 10.1002/anie.201204616

Source DB:  PubMed          Journal:  Angew Chem Int Ed Engl        ISSN: 1433-7851            Impact factor:   15.336


  29 in total

Review 1.  Organometallic iron: the key to biological hydrogen metabolism.

Authors:  M W Adams; E I Stiefel
Journal:  Curr Opin Chem Biol       Date:  2000-04       Impact factor: 8.822

Review 2.  Classification and phylogeny of hydrogenases.

Authors:  P M Vignais; B Billoud; J Meyer
Journal:  FEMS Microbiol Rev       Date:  2001-08       Impact factor: 16.408

Review 3.  Structural and functional analogues of the active sites of the [Fe]-, [NiFe]-, and [FeFe]-hydrogenases.

Authors:  Cédric Tard; Christopher J Pickett
Journal:  Chem Rev       Date:  2009-06       Impact factor: 60.622

Review 4.  Nuclear resonance vibrational spectroscopy--NRVS.

Authors:  W Robert Scheidt; Stephen M Durbin; J Timothy Sage
Journal:  J Inorg Biochem       Date:  2005-01       Impact factor: 4.155

5.  Vibrational analysis of the model complex (mu-edt)[Fe(CO)(3)](2) and comparison to iron-only hydrogenase: the activation scale of hydrogenase model systems.

Authors:  Mary Grace I Galinato; C Matthew Whaley; Nicolai Lehnert
Journal:  Inorg Chem       Date:  2010-04-05       Impact factor: 5.165

6.  Fe-H/D stretching and bending modes in nuclear resonant vibrational, Raman and infrared spectroscopies: comparisons of density functional theory and experiment.

Authors:  Vladimir Pelmenschikov; Yisong Guo; Hongxin Wang; Stephen P Cramer; David A Case
Journal:  Faraday Discuss       Date:  2011       Impact factor: 4.008

7.  Structural and oxidation-state changes at its nonstandard Ni-Fe site during activation of the NAD-reducing hydrogenase from Ralstonia eutropha detected by X-ray absorption, EPR, and FTIR spectroscopy.

Authors:  Tanja Burgdorf; Simone Löscher; Peter Liebisch; Eddy Van der Linden; Marcus Galander; Friedhelm Lendzian; Wolfram Meyer-Klaucke; Simon P J Albracht; Bärbel Friedrich; Holger Dau; Michael Haumann
Journal:  J Am Chem Soc       Date:  2005-01-19       Impact factor: 15.419

8.  Normal-mode analysis of FeCl4- and Fe2S2Cl42- via vibrational mössbauer, resonance Raman, and FT-IR spectroscopies.

Authors:  Matt C Smith; Yuming Xiao; Hongxin Wang; Simon J George; Dimitri Coucouvanis; Markos Koutmos; Wolfgang Sturhahn; Ercan E Alp; Jiyong Zhao; Stephen P Cramer
Journal:  Inorg Chem       Date:  2005-08-08       Impact factor: 5.165

9.  Quantitative vibrational dynamics of iron in nitrosyl porphyrins.

Authors:  Bogdan M Leu; Marek Z Zgierski; Graeme R A Wyllie; W Robert Scheidt; Wolfgang Sturhahn; E Ercan Alp; Stephen M Durbin; J Timothy Sage
Journal:  J Am Chem Soc       Date:  2004-04-07       Impact factor: 15.419

10.  Characterization of the Fe site in iron-sulfur cluster-free hydrogenase (Hmd) and of a model compound via nuclear resonance vibrational spectroscopy (NRVS).

Authors:  Yisong Guo; Hongxin Wang; Yuming Xiao; Sonja Vogt; Rudolf K Thauer; Seigo Shima; Phillip I Volkers; Thomas B Rauchfuss; Vladimir Pelmenschikov; David A Case; Ercan E Alp; Wolfgang Sturhahn; Yoshitaka Yoda; Stephen P Cramer
Journal:  Inorg Chem       Date:  2008-04-12       Impact factor: 5.165

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  24 in total

Review 1.  Frontiers, opportunities, and challenges in biochemical and chemical catalysis of CO2 fixation.

Authors:  Aaron M Appel; John E Bercaw; Andrew B Bocarsly; Holger Dobbek; Daniel L DuBois; Michel Dupuis; James G Ferry; Etsuko Fujita; Russ Hille; Paul J A Kenis; Cheryl A Kerfeld; Robert H Morris; Charles H F Peden; Archie R Portis; Stephen W Ragsdale; Thomas B Rauchfuss; Joost N H Reek; Lance C Seefeldt; Rudolf K Thauer; Grover L Waldrop
Journal:  Chem Rev       Date:  2013-06-14       Impact factor: 60.622

2.  Energy calibration issues in nuclear resonant vibrational spectroscopy: observing small spectral shifts and making fast calibrations.

Authors:  Hongxin Wang; Yoshitaka Yoda; Weibing Dong; Songping D Huang
Journal:  J Synchrotron Radiat       Date:  2013-08-17       Impact factor: 2.616

Review 3.  Hydrogenase Enzymes and Their Synthetic Models: The Role of Metal Hydrides.

Authors:  David Schilter; James M Camara; Mioy T Huynh; Sharon Hammes-Schiffer; Thomas B Rauchfuss
Journal:  Chem Rev       Date:  2016-06-29       Impact factor: 60.622

4.  A practical guide for nuclear resonance vibrational spectroscopy (NRVS) of biochemical samples and model compounds.

Authors:  Hongxin Wang; Esen Ercan Alp; Yoshitaka Yoda; Stephen P Cramer
Journal:  Methods Mol Biol       Date:  2014

5.  Direct Observation of an Iron-Bound Terminal Hydride in [FeFe]-Hydrogenase by Nuclear Resonance Vibrational Spectroscopy.

Authors:  Edward J Reijerse; Cindy C Pham; Vladimir Pelmenschikov; Ryan Gilbert-Wilson; Agnieszka Adamska-Venkatesh; Judith F Siebel; Leland B Gee; Yoshitaka Yoda; Kenji Tamasaku; Wolfgang Lubitz; Thomas B Rauchfuss; Stephen P Cramer
Journal:  J Am Chem Soc       Date:  2017-03-20       Impact factor: 15.419

6.  High-resolution monochromator for iron nuclear resonance vibrational spectroscopy of biological samples.

Authors:  Yoshitaka Yoda; Kyoko Okada; Hongxin Wang; Stephen P Cramer; Makoto Seto
Journal:  Jpn J Appl Phys Pt 1       Date:  2016-11-08

7.  Isoprenoid Biosynthesis in Pathogenic Bacteria: Nuclear Resonance Vibrational Spectroscopy Provides Insight into the Unusual [4Fe-4S] Cluster of the E. coli LytB/IspH Protein.

Authors:  Isabelle Faus; Annegret Reinhard; Sergej Rackwitz; Juliusz A Wolny; Kai Schlage; Hans-Christian Wille; Aleksandr Chumakov; Sergiy Krasutsky; Philippe Chaignon; C Dale Poulter; Myriam Seemann; Volker Schünemann
Journal:  Angew Chem Int Ed Engl       Date:  2015-06-26       Impact factor: 15.336

8.  NRVS for Fe in Biology: Experiment and Basic Interpretation.

Authors:  Leland B Gee; Hongxin Wang; Stephen P Cramer
Journal:  Methods Enzymol       Date:  2017-12-16       Impact factor: 1.600

9.  Characterization of the [3Fe-4S](0/1+) cluster from the D14C variant of Pyrococcus furiosus ferredoxin via combined NRVS and DFT analyses.

Authors:  Lars Lauterbach; Leland B Gee; Vladimir Pelmenschikov; Francis E Jenney; Saeed Kamali; Yoshitaka Yoda; Michael W W Adams; Stephen P Cramer
Journal:  Dalton Trans       Date:  2016-04-25       Impact factor: 4.390

10.  Sterically Stabilized Terminal Hydride of a Diiron Dithiolate.

Authors:  Michaela R Carlson; Danielle L Gray; Casseday P Richers; Wenguang Wang; Pei-Hua Zhao; Thomas B Rauchfuss; Vladimir Pelmenschikov; Cindy C Pham; Leland B Gee; Hongxin Wang; Stephen P Cramer
Journal:  Inorg Chem       Date:  2018-01-31       Impact factor: 5.165

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