Literature DB >> 20225804

Vibrational analysis of the model complex (mu-edt)[Fe(CO)(3)](2) and comparison to iron-only hydrogenase: the activation scale of hydrogenase model systems.

Mary Grace I Galinato1, C Matthew Whaley, Nicolai Lehnert.   

Abstract

Research on simple [FeFe] hydrogenase model systems of type (mu-S(2)R)[Fe(CO)(3)](2) (R = C(2)H(4) (edt), C(3)H(6) (pdt)) which have been shown to function as robust electrocatalysts for proton reduction, provides a reference to understand the electronic and vibrational properties of the active site of [FeFe] hydrogenases and of more sophisticated model systems. In this study, the solution and solid state Raman spectra of (mu-edt)[Fe(CO)(3)](2) and of the corresponding (13)CO-labeled complex are presented and analyzed in detail, with focus on the nu(C=O) and nu(Fe-CO)/delta(Fe-C=O) vibrational regions. These regions are specifically important as vibrations involving CO ligands serve as probes for the "electron richness" of low-valent transition metal centers and the geometric structures of the complexes. The obtained vibrational spectra have been completely assigned in terms of the nu(C=O), nu(Fe-CO), and delta(Fe-C=O) modes, and the force constants of the important C=O and Fe-CO bonds have been determined using our Quantum Chemistry Centered Normal Coordinate Analysis (QCC-NCA). In the 400-650 cm(-1) region, fifteen mixed nu(Fe-CO)/delta(Fe-C=O) modes have been identified. The most prominent Raman peaks at 454, 456, and 483 cm(-1) correspond to a combination of nu(Fe-CO) stretching and delta(Fe-C=O) linear bending modes. The less intense peaks at 416 cm(-1) and 419 cm(-1) correspond to pure delta(Fe-C=O) linear bends. In the nu(C=O) region, the nu(C=O) normal modes at lower energy (1968 and 1964 cm(-1)) are almost pure equatorial (eq) nu(C=O)(eq) stretching vibrations, whereas the remaining four nu(C=O) normal modes show dominant (C=O)(eq) (2070 and 1961 cm(-1)) and (C=O)(ax) (2005 and 1979 cm(-1); ax = axial) contributions. Importantly, an inverse correlation between the f(C=O)(ax/eq) and f(Fe-CO)(ax/eq) force constants is obtained, in agreement with the idea that the Fe(I)-CO bond in these types of complexes is dominated by pi-backdonation. Compared to the reduced form of [FeFe] hydrogenase (H(red)), the nu(C=O) vibrational frequencies of (mu-edt)[Fe(CO)(3)](2) are higher in energy, indicating that the dinuclear iron core in (mu-edt)[Fe(CO)(3)](2) is less electron rich compared to H(red) in the actual enzyme. Finally, quantum yields for the photodecomposition of (mu-edt)[Fe(CO)(3)](2) have been determined.

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Year:  2010        PMID: 20225804      PMCID: PMC2860110          DOI: 10.1021/ic9022135

Source DB:  PubMed          Journal:  Inorg Chem        ISSN: 0020-1669            Impact factor:   5.165


  71 in total

Review 1.  Hydrogenases: hydrogen-activating enzymes.

Authors:  Michel Frey
Journal:  Chembiochem       Date:  2002-03-01       Impact factor: 3.164

2.  Iron hydrogenase active site mimic holding a proton and a hydride.

Authors:  Lennart Schwartz; Gerriet Eilers; Lars Eriksson; Adolf Gogoll; Reiner Lomoth; Sascha Ott
Journal:  Chem Commun (Camb)       Date:  2005-12-20       Impact factor: 6.222

3.  Infrared studies of the CO-inhibited form of the Fe-only hydrogenase from Clostridium pasteurianum I: examination of its light sensitivity at cryogenic temperatures.

Authors:  Zhujun Chen; Brian J Lemon; Shan Huang; Derrick J Swartz; John W Peters; Kimberly A Bagley
Journal:  Biochemistry       Date:  2002-02-12       Impact factor: 3.162

4.  Coordination sphere flexibility of active-site models for Fe-only hydrogenase: studies in intra- and intermolecular diatomic ligand exchange.

Authors:  E J Lyon; I P Georgakaki; J H Reibenspies; M Y Darensbourg
Journal:  J Am Chem Soc       Date:  2001-04-11       Impact factor: 15.419

5.  Proton reduction and dihydrogen oxidation on models of the [2Fe]H cluster of [Fe] hydrogenases. A density functional theory investigation.

Authors:  Giuseppe Zampella; Claudio Greco; Piercarlo Fantucci; Luca De Gioia
Journal:  Inorg Chem       Date:  2006-05-15       Impact factor: 5.165

6.  Requirements for functional models of the iron hydrogenase active site: D2/H2O exchange activity in ((mu-SMe)(mu-pdt)[Fe(CO)2(PMe3)]2+)[BF4-].

Authors:  Irene P Georgakaki; Matthew L Miller; Marcetta Y Darensbourg
Journal:  Inorg Chem       Date:  2003-04-21       Impact factor: 5.165

7.  Ligand versus metal protonation of an iron hydrogenase active site mimic.

Authors:  Gerriet Eilers; Lennart Schwartz; Matthias Stein; Giuseppe Zampella; Luca de Gioia; Sascha Ott; Reiner Lomoth
Journal:  Chemistry       Date:  2007       Impact factor: 5.236

8.  Density functional theory investigation of the active site of Fe-hydrogenases. systematic study of the effects of redox state and ligands hardness on structural and electronic properties of complexes related to the [2Fe](H) subcluster.

Authors:  Maurizio Bruschi; Piercarlo Fantucci; Luca De Gioia
Journal:  Inorg Chem       Date:  2004-06-14       Impact factor: 5.165

9.  Diiron dithiolate complexes containing intra-ligand NH ... S hydrogen bonds: [FeFe] hydrogenase active site models for the electrochemical proton reduction of HOAc with low overpotential.

Authors:  Ze Yu; Mei Wang; Ping Li; Weibing Dong; Fujun Wang; Licheng Sun
Journal:  Dalton Trans       Date:  2008-03-07       Impact factor: 4.390

10.  Desymmetrized Diiron Azadithiolato Carbonyls: A Step Toward Modeling the Iron-Only Hydrogenases.

Authors:  Jane L Stanley; Zachariah M Heiden; Thomas B Rauchfuss; Scott R Wilson; Luca De Gioia; Guiseppe Zampella
Journal:  Organometallics       Date:  2008-01       Impact factor: 3.876

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  6 in total

1.  Favorable Protonation of the (μ-edt)[Fe(2)(PMe(3))(4)(CO)(2)(H-terminal)](+) Hydrogenase Model Complex Over Its Bridging μ-H Counterpart: A Spectroscopic and DFT Study.

Authors:  Mary Grace I Galinato; C Matthew Whaley; Dean Roberts; Peng Wang; Nicolai Lehnert
Journal:  Eur J Inorg Chem       Date:  2011-03       Impact factor: 2.524

2.  Experimental and DFT Investigations Reveal the Influence of the Outer Coordination Sphere on the Vibrational Spectra of Nickel-Substituted Rubredoxin, a Model Hydrogenase Enzyme.

Authors:  Jeffrey W Slater; Sean C Marguet; Sabrina L Cirino; Pearson T Maugeri; Hannah S Shafaat
Journal:  Inorg Chem       Date:  2017-03-21       Impact factor: 5.165

3.  Spectroscopic Investigations of [FeFe] Hydrogenase Maturated with [(57)Fe2(adt)(CN)2(CO)4](2-).

Authors:  Ryan Gilbert-Wilson; Judith F Siebel; Agnieszka Adamska-Venkatesh; Cindy C Pham; Edward Reijerse; Hongxin Wang; Stephen P Cramer; Wolfgang Lubitz; Thomas B Rauchfuss
Journal:  J Am Chem Soc       Date:  2015-07-09       Impact factor: 15.419

4.  Observation of the Fe-CN and Fe-CO vibrations in the active site of [NiFe] hydrogenase by nuclear resonance vibrational spectroscopy.

Authors:  Saeed Kamali; Hongxin Wang; Devrani Mitra; Hideaki Ogata; Wolfgang Lubitz; Brian C Manor; Thomas B Rauchfuss; Deborah Byrne; Violaine Bonnefoy; Francis E Jenney; Michael W W Adams; Yoshitaka Yoda; Ercan Alp; Jiyong Zhao; Stephen P Cramer
Journal:  Angew Chem Int Ed Engl       Date:  2012-11-08       Impact factor: 15.336

5.  Metal Organic Frameworks Derived Fe-N-C Nanostructures as High-Performance Electrodes for Sodium Ion Batteries and Electromagnetic Interference (EMI) Shielding.

Authors:  Vadahanambi Sridhar; Inwon Lee; Hyun Park
Journal:  Molecules       Date:  2021-02-15       Impact factor: 4.411

6.  Aromatic foldamers as scaffolds for metal second coordination sphere design.

Authors:  Antoine Meunier; Michael L Singleton; Brice Kauffmann; Thierry Granier; Guillaume Lautrette; Yann Ferrand; Ivan Huc
Journal:  Chem Sci       Date:  2020-10-12       Impact factor: 9.825

  6 in total

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