Literature DB >> 22977245

Two related RNA-editing proteins target the same sites in mitochondria of Arabidopsis thaliana.

Daniil Verbitskiy1, Anja Zehrmann, Barbara Härtel, Axel Brennicke, Mizuki Takenaka.   

Abstract

The facilitators for specific cytosine-to-uridine RNA-editing events in plant mitochondria and plastids are pentatricopeptide repeat (PPR)-containing proteins with specific additional C-terminal domains. Here we report the related PPR proteins mitochondrial editing factor 8 (MEF8) and MEF8S with only five such repeats each to be both involved in RNA editing at the same two sites in mitochondria of Arabidopsis thaliana. Mutants of MEF8 show diminished editing in leaves but not in pollen, whereas mutants of the related protein MEF8S show reduced RNA editing in pollen but not in leaves. Overexpressed MEF8 or MEF8S both increase editing at the two target sites in a mef8 mutant. Double mutants of MEF8 and MEF8S are not viable although both identified target sites are in mRNAs for nonessential proteins. This suggests that MEF8 and MEF8S may have other essential functions beyond these two editing sites in complex I mRNAs.

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Year:  2012        PMID: 22977245      PMCID: PMC3488076          DOI: 10.1074/jbc.M112.397992

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  59 in total

1.  RNA editing competence of trans-factor MEF1 is modulated by ecotype-specific differences but requires the DYW domain.

Authors:  Anja Zehrmann; Daniil Verbitskiy; Barbara Härtel; Axel Brennicke; Mizuki Takenaka
Journal:  FEBS Lett       Date:  2010-09-07       Impact factor: 4.124

2.  Targeted gene disruption identifies three PPR-DYW proteins involved in RNA editing for five editing sites of the moss mitochondrial transcripts.

Authors:  Shotaro Ohtani; Mizuho Ichinose; Eiji Tasaki; Yoshiaki Aoki; Yoshihiro Komura; Mamoru Sugita
Journal:  Plant Cell Physiol       Date:  2010-09-12       Impact factor: 4.927

3.  The moss pentatricopeptide repeat protein with a DYW domain is responsible for RNA editing of mitochondrial ccmFc transcript.

Authors:  Eiji Tasaki; Mitsuru Hattori; Mamoru Sugita
Journal:  Plant J       Date:  2010-02-16       Impact factor: 6.417

4.  Reverse genetic screening identifies five E-class PPR proteins involved in RNA editing in mitochondria of Arabidopsis thaliana.

Authors:  Mizuki Takenaka; Daniil Verbitskiy; Anja Zehrmann; Axel Brennicke
Journal:  J Biol Chem       Date:  2010-06-21       Impact factor: 5.157

5.  The gametic central cell of Arabidopsis determines the lifespan of adjacent accessory cells.

Authors:  Christina Kägi; Nadine Baumann; Nicola Nielsen; York-Dieter Stierhof; Rita Gross-Hardt
Journal:  Proc Natl Acad Sci U S A       Date:  2010-12-06       Impact factor: 11.205

6.  DYW-type PPR proteins in a heterolobosean protist: plant RNA editing factors involved in an ancient horizontal gene transfer?

Authors:  Volker Knoop; Mareike Rüdinger
Journal:  FEBS Lett       Date:  2010-10-02       Impact factor: 4.124

7.  Natural variation in Arabidopsis leads to the identification of REME1, a pentatricopeptide repeat-DYW protein controlling the editing of mitochondrial transcripts.

Authors:  Stéphane Bentolila; Walter Knight; Maureen Hanson
Journal:  Plant Physiol       Date:  2010-10-25       Impact factor: 8.340

8.  A single Arabidopsis organellar protein has RNase P activity.

Authors:  Anthony Gobert; Bernard Gutmann; Andreas Taschner; Markus Gössringer; Johann Holzmann; Roland K Hartmann; Walter Rossmanith; Philippe Giegé
Journal:  Nat Struct Mol Biol       Date:  2010-05-16       Impact factor: 15.369

9.  The involvement of a PPR protein of the P subfamily in partial RNA editing of an Arabidopsis mitochondrial transcript.

Authors:  Yoko Doniwa; Minoru Ueda; Masami Ueta; Akira Wada; Koh-ichi Kadowaki; Nobuhiro Tsutsumi
Journal:  Gene       Date:  2010-02-01       Impact factor: 3.688

10.  MEF9, an E-subclass pentatricopeptide repeat protein, is required for an RNA editing event in the nad7 transcript in mitochondria of Arabidopsis.

Authors:  Mizuki Takenaka
Journal:  Plant Physiol       Date:  2009-12-16       Impact factor: 8.340

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  10 in total

Review 1.  Importance of organellar proteins, protein translocation and vesicle transport routes for pollen development and function.

Authors:  Puneet Paul; Sascha Röth; Enrico Schleiff
Journal:  Plant Reprod       Date:  2016-02-13       Impact factor: 3.767

2.  The longest mitochondrial RNA editing PPR protein MEF12 in Arabidopsis thaliana requires the full-length E domain.

Authors:  Barbara Härtel; Anja Zehrmann; Daniil Verbitskiy; Mizuki Takenaka
Journal:  RNA Biol       Date:  2013-06-20       Impact factor: 4.652

3.  Two interacting PPR proteins are major Arabidopsis editing factors in plastid and mitochondria.

Authors:  Damien Guillaumot; Mauricio Lopez-Obando; Kevin Baudry; Alexandra Avon; Guillem Rigaill; Andéol Falcon de Longevialle; Benjamin Broche; Mizuki Takenaka; Richard Berthomé; Geert De Jaeger; Etienne Delannoy; Claire Lurin
Journal:  Proc Natl Acad Sci U S A       Date:  2017-07-31       Impact factor: 11.205

4.  GRP23 plays a core role in E-type editosomes via interacting with MORFs and atypical PPR-DYWs in Arabidopsis mitochondria.

Authors:  Yan-Zhuo Yang; Xin-Yuan Liu; Jiao-Jiao Tang; Yong Wang; Chunhui Xu; Bao-Cai Tan
Journal:  Proc Natl Acad Sci U S A       Date:  2022-09-19       Impact factor: 12.779

5.  The Pentatricopeptide Repeat Proteins TANG2 and ORGANELLE TRANSCRIPT PROCESSING439 Are Involved in the Splicing of the Multipartite nad5 Transcript Encoding a Subunit of Mitochondrial Complex I.

Authors:  Catherine Colas des Francs-Small; Andéol Falcon de Longevialle; Yunhai Li; Elizabeth Lowe; Sandra K Tanz; Caroline Smith; Michael W Bevan; Ian Small
Journal:  Plant Physiol       Date:  2014-06-23       Impact factor: 8.340

6.  Improved computational target site prediction for pentatricopeptide repeat RNA editing factors.

Authors:  Mizuki Takenaka; Anja Zehrmann; Axel Brennicke; Knut Graichen
Journal:  PLoS One       Date:  2013-06-06       Impact factor: 3.240

7.  Deletions in cox2 mRNA result in loss of splicing and RNA editing and gain of novel RNA editing sites.

Authors:  Stefanie Grüttner; Christina Hopf; Abhishek Kumar; Frank Kempken
Journal:  PLoS One       Date:  2013-12-04       Impact factor: 3.240

8.  Mitochondrial RNA editing PPR proteins can tolerate protein tags at E as well as at DYW domain termini.

Authors:  Nadja Brehme; Anja Zehrmann; Daniil Verbitskiy; Barbara Härtel; Mizuki Takenaka
Journal:  Front Plant Sci       Date:  2014-04-03       Impact factor: 5.753

9.  Pentatricopeptide repeat proteins involved in plant organellar RNA editing.

Authors:  Yusuke Yagi; Makoto Tachikawa; Hisayo Noguchi; Soichirou Satoh; Junichi Obokata; Takahiro Nakamura
Journal:  RNA Biol       Date:  2013-05-03       Impact factor: 4.652

10.  Frequent chloroplast RNA editing in early-branching flowering plants: pilot studies on angiosperm-wide coexistence of editing sites and their nuclear specificity factors.

Authors:  Anke Hein; Monika Polsakiewicz; Volker Knoop
Journal:  BMC Evol Biol       Date:  2016-01-25       Impact factor: 3.260

  10 in total

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