Literature DB >> 20888816

DYW-type PPR proteins in a heterolobosean protist: plant RNA editing factors involved in an ancient horizontal gene transfer?

Volker Knoop1, Mareike Rüdinger.   

Abstract

A particular type of pentatricopeptide repeat (PPR) proteins with variable length of the 35 aa PPR motifs and conserved carboxyterminal extensions, named the PLS proteins, was so far exclusively identified in land plants. Several PLS proteins with such domain extensions (E, E+, DYW) were shown to be involved in plant organellar RNA editing but their evolutionary origin had remained enigmatic. We here report the first case of DYW-type PLS proteins outside of the plant kingdom in the protist Naegleria gruberi and hypothesize on horizontal gene transfer in very early land plant evolution.
Copyright © 2010 Federation of European Biochemical Societies. Published by Elsevier B.V. All rights reserved.

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Year:  2010        PMID: 20888816     DOI: 10.1016/j.febslet.2010.09.041

Source DB:  PubMed          Journal:  FEBS Lett        ISSN: 0014-5793            Impact factor:   4.124


  25 in total

1.  Nuclear DYW-type PPR gene families diversify with increasing RNA editing frequencies in liverwort and moss mitochondria.

Authors:  Mareike Rüdinger; Ute Volkmar; Henning Lenz; Milena Groth-Malonek; Volker Knoop
Journal:  J Mol Evol       Date:  2012-02       Impact factor: 2.395

2.  Identification of two pentatricopeptide repeat genes required for RNA editing and zinc binding by C-terminal cytidine deaminase-like domains.

Authors:  Michael L Hayes; Karolyn Giang; Beniam Berhane; R Michael Mulligan
Journal:  J Biol Chem       Date:  2013-11-05       Impact factor: 5.157

Review 3.  Molecular and Functional Diversity of RNA Editing in Plant Mitochondria.

Authors:  Wei Tang; Caroline Luo
Journal:  Mol Biotechnol       Date:  2018-12       Impact factor: 2.695

4.  Two related RNA-editing proteins target the same sites in mitochondria of Arabidopsis thaliana.

Authors:  Daniil Verbitskiy; Anja Zehrmann; Barbara Härtel; Axel Brennicke; Mizuki Takenaka
Journal:  J Biol Chem       Date:  2012-09-13       Impact factor: 5.157

5.  Plant-type mitochondrial RNA editing in the protist Naegleria gruberi.

Authors:  Mareike Rüdinger; Lillian Fritz-Laylin; Monika Polsakiewicz; Volker Knoop
Journal:  RNA       Date:  2011-10-24       Impact factor: 4.942

6.  Cytidine deaminase motifs within the DYW domain of two pentatricopeptide repeat-containing proteins are required for site-specific chloroplast RNA editing.

Authors:  Jessica A Wagoner; Tao Sun; Lin Lin; Maureen R Hanson
Journal:  J Biol Chem       Date:  2014-12-15       Impact factor: 5.157

Review 7.  The Naegleria genome: a free-living microbial eukaryote lends unique insights into core eukaryotic cell biology.

Authors:  Lillian K Fritz-Laylin; Michael L Ginger; Charles Walsh; Scott C Dawson; Chandler Fulton
Journal:  Res Microbiol       Date:  2011-03-21       Impact factor: 3.992

8.  A survey of PPR proteins identifies DYW domains like those of land plant RNA editing factors in diverse eukaryotes.

Authors:  Mareike Schallenberg-Rüdinger; Henning Lenz; Monika Polsakiewicz; Jonatha M Gott; Volker Knoop
Journal:  RNA Biol       Date:  2013-07-16       Impact factor: 4.652

9.  The dual-targeted RNA editing factor AEF1 is universally conserved among angiosperms and reveals only minor adaptations upon loss of its chloroplast or its mitochondrial target.

Authors:  Anke Hein; Sarah Brenner; Monika Polsakiewicz; Volker Knoop
Journal:  Plant Mol Biol       Date:  2019-12-03       Impact factor: 4.076

10.  Molecular evolution of pentatricopeptide repeat genes reveals truncation in species lacking an editing target and structural domains under distinct selective pressures.

Authors:  Michael L Hayes; Karolyn Giang; R Michael Mulligan
Journal:  BMC Evol Biol       Date:  2012-05-14       Impact factor: 3.260

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