Literature DB >> 36122211

GRP23 plays a core role in E-type editosomes via interacting with MORFs and atypical PPR-DYWs in Arabidopsis mitochondria.

Yan-Zhuo Yang1, Xin-Yuan Liu1, Jiao-Jiao Tang1, Yong Wang1, Chunhui Xu1, Bao-Cai Tan1.   

Abstract

Identifying the PPR-E+-NUWA-DYW2 editosome improves our understanding of the C-to-U RNA editing in plant organelles. However, the mechanism of RNA editing remains to be elucidated. Here, we report that GLUTAMINE-RICH PROTEIN23 (GRP23), a previously identified nuclear transcription regulator, plays an essential role in mitochondrial RNA editing through interacting with MORF (multiple organellar RNA-editing factor) proteins and atypical DYW-type pentatricopeptide repeat (PPR) proteins. GRP23 is targeted to mitochondria, plastids, and nuclei. Analysis of the grp23 mutants rescued by embryo-specific complementation shows decreased editing efficiency at 352 sites in mitochondria and 6 sites in plastids, with a predominant specificity for sites edited by the PPR-E and PPR-DYW proteins. GRP23 interacts with atypical PPR-DYW proteins (MEF8, MEF8S, DYW2, and DYW4) and MORF proteins (MORF1 and MORF8), whereas the four PPR-DYWs interact with the two MORFs. These interactions may increase the stability of the GRP23-MORF-atypical PPR-DYW complex. Furthermore, analysis of mef8N△64aamef8s double mutants shows that MEF8/MEF8S are required for the editing of the PPR-E protein-targeted sites in mitochondria. GRP23 could enhance the interaction between PPR-E and MEF8/MEF8S and form a homodimer or heterodimer with NUWA. Genetic complementation analysis shows that the C-terminal domains of GRP23 and NUWA possess a similar function, probably in the interaction with the MORFs. NUWA also interacts with atypical PPR-DYWs in yeast. Both GRP23 and NUWA interact with the atypical PPR-DYWs, suggesting that the PPR-E proteins recruit MEF8/MEF8S, whereas the PPR-E+ proteins specifically recruit DYW2 as the trans deaminase, and then GRP23, NUWA, and MORFs facilitate and/or stabilize the E or E+-type editosome formation.

Entities:  

Keywords:  Arabidopsis; GRP23; MORF; editosome; mitochondrion

Mesh:

Substances:

Year:  2022        PMID: 36122211      PMCID: PMC9522420          DOI: 10.1073/pnas.2210978119

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   12.779


  42 in total

1.  The PPR motif - a TPR-related motif prevalent in plant organellar proteins.

Authors:  I D Small; N Peeters
Journal:  Trends Biochem Sci       Date:  2000-02       Impact factor: 13.807

2.  Redefining the structural motifs that determine RNA binding and RNA editing by pentatricopeptide repeat proteins in land plants.

Authors:  Shifeng Cheng; Bernard Gutmann; Xiao Zhong; Yongtao Ye; Mark F Fisher; Fengqi Bai; Ian Castleden; Yue Song; Bo Song; Jiaying Huang; Xin Liu; Xun Xu; Boon L Lim; Charles S Bond; Siu-Ming Yiu; Ian Small
Journal:  Plant J       Date:  2016-02       Impact factor: 6.417

3.  Two interacting coiled-coil proteins, WEB1 and PMI2, maintain the chloroplast photorelocation movement velocity in Arabidopsis.

Authors:  Yutaka Kodama; Noriyuki Suetsugu; Sam-Geun Kong; Masamitsu Wada
Journal:  Proc Natl Acad Sci U S A       Date:  2010-10-25       Impact factor: 11.205

4.  Two DYW subclass PPR proteins are involved in RNA editing of ccmFc and atp9 transcripts in the moss Physcomitrella patens: first complete set of PPR editing factors in plant mitochondria.

Authors:  Mizuho Ichinose; Chieko Sugita; Yusuke Yagi; Takahiro Nakamura; Mamoru Sugita
Journal:  Plant Cell Physiol       Date:  2013-09-20       Impact factor: 4.927

Review 5.  Plant organellar RNA editing: what 30 years of research has revealed.

Authors:  Ian D Small; Mareike Schallenberg-Rüdinger; Mizuki Takenaka; Hakim Mireau; Oren Ostersetzer-Biran
Journal:  Plant J       Date:  2019-12-12       Impact factor: 6.417

6.  Two related RNA-editing proteins target the same sites in mitochondria of Arabidopsis thaliana.

Authors:  Daniil Verbitskiy; Anja Zehrmann; Barbara Härtel; Axel Brennicke; Mizuki Takenaka
Journal:  J Biol Chem       Date:  2012-09-13       Impact factor: 5.157

7.  RIP1, a member of an Arabidopsis protein family, interacts with the protein RARE1 and broadly affects RNA editing.

Authors:  Stephane Bentolila; Wade P Heller; Tao Sun; Arianne M Babina; Giulia Friso; Klaas J van Wijk; Maureen R Hanson
Journal:  Proc Natl Acad Sci U S A       Date:  2012-05-07       Impact factor: 11.205

8.  Plant-type pentatricopeptide repeat proteins with a DYW domain drive C-to-U RNA editing in Escherichia coli.

Authors:  Bastian Oldenkott; Yingying Yang; Elena Lesch; Volker Knoop; Mareike Schallenberg-Rüdinger
Journal:  Commun Biol       Date:  2019-03-01

9.  The Analysis of the Editing Defects in the dyw2 Mutant Provides New Clues for the Prediction of RNA Targets of Arabidopsis E+-Class PPR Proteins.

Authors:  Bastien Malbert; Matthias Burger; Mauricio Lopez-Obando; Kevin Baudry; Alexandra Launay-Avon; Barbara Härtel; Daniil Verbitskiy; Anja Jörg; Richard Berthomé; Claire Lurin; Mizuki Takenaka; Etienne Delannoy
Journal:  Plants (Basel)       Date:  2020-02-21
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.